RNA–Protein interactions for RNA: ENST00000578593.1

DDX42-207, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 2,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-207ENST00000578593 TBC1D2Q9BYX2 928 aa9.24□□□□□ -0.93
DDX42-207ENST00000578593 ISY1Q9ULR0 285 aaKnown RBP9.24□□□□□ -0.93
DDX42-207ENST00000578593 EIF3AQ14152 1382 aaKnown RBP9.24□□□□□ -0.93
DDX42-207ENST00000578593 SYNJ2O15056 1496 aa9.24□□□□□ -0.93
DDX42-207ENST00000578593 ERCC6L2Q5T890 1561 aa9.24□□□□□ -0.93
DDX42-207ENST00000578593 ZNF513Q8N8E2 541 aaPredicted RBP9.24□□□□□ -0.93
DDX42-207ENST00000578593 SPRYD3Q8NCJ5 442 aa9.24□□□□□ -0.93
DDX42-207ENST00000578593 GTF2A1P52655 376 aaPredicted RBP9.23□□□□□ -0.93
DDX42-207ENST00000578593 GOLGA2Q08379 1002 aa9.23□□□□□ -0.93
DDX42-207ENST00000578593 NBPF6Q5VWK0 638 aa9.23□□□□□ -0.93
DDX42-207ENST00000578593 NBPF5PQ86XG9 351 aaPredicted RBP9.23□□□□□ -0.93
DDX42-207ENST00000578593 TMTC2Q8N394 836 aa9.23□□□□□ -0.93
DDX42-207ENST00000578593 NBPF4Q96M43 638 aa9.23□□□□□ -0.93
DDX42-207ENST00000578593 CEP170Q5SW79 1584 aa9.23□□□□□ -0.93
DDX42-207ENST00000578593 SASS6Q6UVJ0 657 aa9.23□□□□□ -0.93
DDX42-207ENST00000578593 FEZ2Q9UHY8 353 aaPredicted RBP9.23□□□□□ -0.93
DDX42-207ENST00000578593 ZNF521Q96K83 1311 aa9.22□□□□□ -0.93
DDX42-207ENST00000578593 KIF16BQ96L93 1317 aa9.22□□□□□ -0.93
DDX42-207ENST00000578593 NOP2P46087 812 aaKnown RBP9.22□□□□□ -0.93
DDX42-207ENST00000578593 CCDC27Q2M243 656 aa9.22□□□□□ -0.93
DDX42-207ENST00000578593 TRAK2O60296 914 aa9.22□□□□□ -0.93
DDX42-207ENST00000578593 SSR1P43307 286 aaKnown RBP9.22□□□□□ -0.93
DDX42-207ENST00000578593 MAPK8IP3Q9UPT6 1336 aa9.22□□□□□ -0.93
DDX42-207ENST00000578593 BCAR3O75815 825 aa9.21□□□□□ -0.93
DDX42-207ENST00000578593 ZNF710Q8N1W2 664 aa9.21□□□□□ -0.93
DDX42-207ENST00000578593 PANK3Q9H999 370 aa9.21□□□□□ -0.93
DDX42-207ENST00000578593 PRG4Q92954 1404 aaPredicted RBP9.21□□□□□ -0.93
DDX42-207ENST00000578593 ZKSCAN8Q15776 578 aaPredicted RBP9.21□□□□□ -0.93
DDX42-207ENST00000578593 CCDC96Q2M329 555 aa9.21□□□□□ -0.93
DDX42-207ENST00000578593 CASC1Q6TDU7 716 aa9.21□□□□□ -0.93
DDX42-207ENST00000578593 TBC1D32Q96NH3 1257 aa9.21□□□□□ -0.93
DDX42-207ENST00000578593 GPATCH8Q9UKJ3 1502 aaKnown RBP9.21□□□□□ -0.94
DDX42-207ENST00000578593 TRPM1Q7Z4N2 1603 aa9.21□□□□□ -0.94
DDX42-207ENST00000578593 TNNT3P45378 269 aaPredicted RBP9.21□□□□□ -0.94
DDX42-207ENST00000578593 CALR3Q96L12 384 aaKnown RBP9.21□□□□□ -0.94
DDX42-207ENST00000578593 DONSONQ9NYP3 566 aa9.21□□□□□ -0.94
DDX42-207ENST00000578593 KDM5DQ9BY66 1539 aa9.2□□□□□ -0.94
DDX42-207ENST00000578593 MFAP1P55081 439 aaKnown RBP9.2□□□□□ -0.94
DDX42-207ENST00000578593 SLFN5Q08AF3 891 aa9.2□□□□□ -0.94
DDX42-207ENST00000578593 BSDC1Q9NW68 430 aaPredicted RBP9.2□□□□□ -0.94
DDX42-207ENST00000578593 CALCOCO1Q9P1Z2 691 aa9.2□□□□□ -0.94
DDX42-207ENST00000578593 DISP3Q9P2K9 1392 aa9.2□□□□□ -0.94
DDX42-207ENST00000578593 SPDYE4A6NLX3 237 aa9.2□□□□□ -0.94
DDX42-207ENST00000578593 UPF2Q9HAU5 1272 aaKnown RBP9.2□□□□□ -0.94
DDX42-207ENST00000578593 SPINK5Q9NQ38 1064 aaPredicted RBP9.2□□□□□ -0.94
DDX42-207ENST00000578593 GABPB1Q06547 395 aaPredicted RBP9.19□□□□□ -0.94
DDX42-207ENST00000578593 COL17A1Q9UMD9 1497 aaPredicted RBP9.19□□□□□ -0.94
DDX42-207ENST00000578593 WDR43Q15061 677 aaKnown RBP eCLIP9.19□□□□□ -0.94
DDX42-207ENST00000578593 DNAJC14Q6Y2X3 702 aaPredicted RBP9.19□□□□□ -0.94
DDX42-207ENST00000578593 PPP1R9BQ96SB3 815 aa9.19□□□□□ -0.94
DDX42-207ENST00000578593 DNAJC21Q5F1R6 531 aaKnown RBP9.18□□□□□ -0.94
DDX42-207ENST00000578593 DHX16O60231 1041 aaKnown RBP9.18□□□□□ -0.94
DDX42-207ENST00000578593 SLFN14P0C7P3 912 aa9.18□□□□□ -0.94
DDX42-207ENST00000578593 CCDC173Q0VFZ6 552 aa9.18□□□□□ -0.94
DDX42-207ENST00000578593 CSPP1Q1MSJ5 1256 aa9.18□□□□□ -0.94
DDX42-207ENST00000578593 CLUAP1Q96AJ1 413 aa9.18□□□□□ -0.94
DDX42-207ENST00000578593 NUP155O75694 1391 aa9.18□□□□□ -0.94
DDX42-207ENST00000578593 ANKRD50Q9ULJ7 1429 aa9.18□□□□□ -0.94
DDX42-207ENST00000578593 ZNF853P0CG23 659 aa9.18□□□□□ -0.94
DDX42-207ENST00000578593 RBM28Q9NW13 759 aaKnown RBP9.18□□□□□ -0.94
DDX42-207ENST00000578593 NKTRP30414 1462 aaKnown RBP9.17□□□□□ -0.94
DDX42-207ENST00000578593 TROQ12816 1431 aaPredicted RBP9.17□□□□□ -0.94
DDX42-207ENST00000578593 CCDC189A1A4V9 331 aa9.17□□□□□ -0.94
DDX42-207ENST00000578593 ICE2Q659A1 982 aa9.17□□□□□ -0.94
DDX42-207ENST00000578593 TRMT2AQ8IZ69 625 aaKnown RBP9.17□□□□□ -0.94
DDX42-207ENST00000578593 CHMP5Q9NZZ3 219 aa9.17□□□□□ -0.94
DDX42-207ENST00000578593 RSPH14Q9UHP6 348 aa9.17□□□□□ -0.94
DDX42-207ENST00000578593 NINLQ9Y2I6 1382 aa9.17□□□□□ -0.94
DDX42-207ENST00000578593 TDO2P48775 406 aa9.17□□□□□ -0.94
DDX42-207ENST00000578593 XPCQ01831 940 aaPredicted RBP9.17□□□□□ -0.94
DDX42-207ENST00000578593 TESK2Q96S53 571 aa9.17□□□□□ -0.94
DDX42-207ENST00000578593 COG6Q9Y2V7 657 aa9.17□□□□□ -0.94
DDX42-207ENST00000578593 CGNL1Q0VF96 1302 aa9.16□□□□□ -0.94
DDX42-207ENST00000578593 MYO5CQ9NQX4 1742 aa9.16□□□□□ -0.94
DDX42-207ENST00000578593 CT47B1P0C2W7 299 aaPredicted RBP9.16□□□□□ -0.94
DDX42-207ENST00000578593 GUCY2CP25092 1073 aa9.16□□□□□ -0.94
DDX42-207ENST00000578593 CTR9Q6PD62 1173 aa9.16□□□□□ -0.94
DDX42-207ENST00000578593 CCDC146Q8IYE0 955 aa9.16□□□□□ -0.94
DDX42-207ENST00000578593 PANK1Q8TE04 598 aa9.16□□□□□ -0.94
DDX42-207ENST00000578593 BRMS1Q9HCU9 246 aa9.16□□□□□ -0.94
DDX42-207ENST00000578593 KIF1CO43896 1103 aaKnown RBP9.16□□□□□ -0.94
DDX42-207ENST00000578593 PPP2R1AP30153 589 aa9.16□□□□□ -0.94
DDX42-207ENST00000578593 MYRIPQ8NFW9 859 aa9.16□□□□□ -0.94
DDX42-207ENST00000578593 ITFG2Q969R8 447 aa9.16□□□□□ -0.94
DDX42-207ENST00000578593 ZNF777Q9ULD5 760 aaPredicted RBP9.16□□□□□ -0.94
DDX42-207ENST00000578593 PLB1Q6P1J6 1458 aa9.16□□□□□ -0.94
DDX42-207ENST00000578593 RINLQ6ZS11 566 aa9.15□□□□□ -0.94
DDX42-207ENST00000578593 ARMCX6Q7L4S7 300 aa9.15□□□□□ -0.94
DDX42-207ENST00000578593 GAS2L3Q86XJ1 694 aa9.15□□□□□ -0.94
DDX42-207ENST00000578593 CFDP1Q9UEE9 299 aaPredicted RBP9.15□□□□□ -0.94
DDX42-207ENST00000578593 MRVI1Q9Y6F6 885 aa9.15□□□□□ -0.94
DDX42-207ENST00000578593 PTPRGP23470 1445 aa9.15□□□□□ -0.94
DDX42-207ENST00000578593 PRAG1Q86YV5 1406 aa9.15□□□□□ -0.94
DDX42-207ENST00000578593 ANKRD30AQ9BXX3 1397 aa9.15□□□□□ -0.94
DDX42-207ENST00000578593 MTA1Q13330 715 aa9.15□□□□□ -0.95
DDX42-207ENST00000578593 TSHZ1Q6ZSZ6 1077 aa9.15□□□□□ -0.95
DDX42-207ENST00000578593 SLC26A8Q96RN1 970 aa9.15□□□□□ -0.95
DDX42-207ENST00000578593 GRIN2AQ12879 1464 aa9.14□□□□□ -0.95
DDX42-207ENST00000578593 DDX11L8A8MPP1 907 aa9.14□□□□□ -0.95
DDX42-207ENST00000578593 PDE3AQ14432 1141 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms