RNA–Protein interactions for RNA: ENST00000578454.5

NCOA4-201, Transcript of nuclear receptor coactivator 4, humanhuman

TSL 1 (best) BASIC

Gene NCOA4, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA4-201ENST00000578454 DMRT2Q9Y5R5 561 aa11.4□□□□□ -0.58
NCOA4-201ENST00000578454 CDC42BPGQ6DT37 1551 aa11.4□□□□□ -0.58
NCOA4-201ENST00000578454 RBM33Q96EV2 1170 aaKnown RBP11.4□□□□□ -0.59
NCOA4-201ENST00000578454 NALCNQ8IZF0 1738 aa11.39□□□□□ -0.59
NCOA4-201ENST00000578454 TOPAZ1Q8N9V7 1692 aa11.39□□□□□ -0.59
NCOA4-201ENST00000578454 FAM9BQ8IZU0 186 aa11.39□□□□□ -0.59
NCOA4-201ENST00000578454 ITSN1Q15811 1721 aa11.39□□□□□ -0.59
NCOA4-201ENST00000578454 FMN2Q9NZ56 1722 aa11.39□□□□□ -0.59
NCOA4-201ENST00000578454 EDC4Q6P2E9 1401 aaKnown RBP11.38□□□□□ -0.59
NCOA4-201ENST00000578454 ACEP12821 1306 aa11.38□□□□□ -0.59
NCOA4-201ENST00000578454 FYB1O15117 783 aa11.37□□□□□ -0.59
NCOA4-201ENST00000578454 C19orf44Q9H6X5 657 aa11.37□□□□□ -0.59
NCOA4-201ENST00000578454 NCOA3Q9Y6Q9 1424 aa11.37□□□□□ -0.59
NCOA4-201ENST00000578454 AKAP12Q02952 1782 aa11.37□□□□□ -0.59
NCOA4-201ENST00000578454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.37□□□□□ -0.59
NCOA4-201ENST00000578454 NGDNQ8NEJ9 315 aaKnown RBP11.37□□□□□ -0.59
NCOA4-201ENST00000578454 PNISRQ8TF01 805 aaKnown RBP11.37□□□□□ -0.59
NCOA4-201ENST00000578454 GGNBP2Q9H3C7 697 aa11.36□□□□□ -0.59
NCOA4-201ENST00000578454 MON2Q7Z3U7 1717 aa11.36□□□□□ -0.59
NCOA4-201ENST00000578454 PMFBP1Q8TBY8 1022 aa11.36□□□□□ -0.59
NCOA4-201ENST00000578454 TMEM94Q12767 1356 aa11.35□□□□□ -0.59
NCOA4-201ENST00000578454 STRCP1A6NGW2 1772 aa11.35□□□□□ -0.59
NCOA4-201ENST00000578454 RGPD8O14715 1765 aaPredicted RBP11.35□□□□□ -0.59
NCOA4-201ENST00000578454 KIF20BQ96Q89 1820 aa11.35□□□□□ -0.59
NCOA4-201ENST00000578454 TNNT2P45379 298 aaPredicted RBP11.35□□□□□ -0.59
NCOA4-201ENST00000578454 POLR3AO14802 1390 aaPredicted RBP11.35□□□□□ -0.59
NCOA4-201ENST00000578454 ANKRD26Q9UPS8 1709 aa11.34□□□□□ -0.59
NCOA4-201ENST00000578454 EIF5BO60841 1220 aaKnown RBP11.34□□□□□ -0.59
NCOA4-201ENST00000578454 ATF3P18847 181 aa11.34□□□□□ -0.59
NCOA4-201ENST00000578454 NBR1Q14596 966 aa11.34□□□□□ -0.59
NCOA4-201ENST00000578454 PHF8Q9UPP1 1060 aa11.34□□□□□ -0.59
NCOA4-201ENST00000578454 USP6P35125 1406 aa11.34□□□□□ -0.59
NCOA4-201ENST00000578454 ESCO1Q5FWF5 840 aa11.33□□□□□ -0.6
NCOA4-201ENST00000578454 TTC21BQ7Z4L5 1316 aa11.33□□□□□ -0.6
NCOA4-201ENST00000578454 DCCP43146 1447 aa11.32□□□□□ -0.6
NCOA4-201ENST00000578454 HNRNPUQ00839 825 aaKnown RBP eCLIP11.32□□□□□ -0.6
NCOA4-201ENST00000578454 NME9Q86XW9 330 aa11.32□□□□□ -0.6
NCOA4-201ENST00000578454 COG3Q96JB2 828 aa11.32□□□□□ -0.6
NCOA4-201ENST00000578454 TTC21AQ8NDW8 1320 aa11.32□□□□□ -0.6
NCOA4-201ENST00000578454 ZNF335Q9H4Z2 1342 aaPredicted RBP11.32□□□□□ -0.6
NCOA4-201ENST00000578454 CFAP53Q96M91 514 aa11.32□□□□□ -0.6
NCOA4-201ENST00000578454 MSH6P52701 1360 aa11.31□□□□□ -0.6
NCOA4-201ENST00000578454 WDR43Q15061 677 aaKnown RBP eCLIP11.31□□□□□ -0.6
NCOA4-201ENST00000578454 CADPS2Q86UW7 1296 aa11.31□□□□□ -0.6
NCOA4-201ENST00000578454 SCAF1Q9H7N4 1312 aaKnown RBP11.31□□□□□ -0.6
NCOA4-201ENST00000578454 MTHFSP49914 203 aa11.31□□□□□ -0.6
NCOA4-201ENST00000578454 NRKQ7Z2Y5 1582 aa11.31□□□□□ -0.6
NCOA4-201ENST00000578454 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.3□□□□□ -0.6
NCOA4-201ENST00000578454 SSH2Q76I76 1423 aa11.3□□□□□ -0.6
NCOA4-201ENST00000578454 LRRC7Q96NW7 1537 aa11.3□□□□□ -0.6
NCOA4-201ENST00000578454 PSME1Q06323 249 aa11.3□□□□□ -0.6
NCOA4-201ENST00000578454 C1orf167Q5SNV9 1468 aa11.29□□□□□ -0.6
NCOA4-201ENST00000578454 BBXQ8WY36 941 aaPredicted RBP11.29□□□□□ -0.6
NCOA4-201ENST00000578454 INSRP06213 1382 aa11.29□□□□□ -0.6
NCOA4-201ENST00000578454 ORAI2Q96SN7 254 aa11.29□□□□□ -0.6
NCOA4-201ENST00000578454 ZRANB1Q9UGI0 708 aa11.28□□□□□ -0.6
NCOA4-201ENST00000578454 PAK3O75914 559 aaPredicted RBP11.27□□□□□ -0.6
NCOA4-201ENST00000578454 MST1RQ04912 1400 aa11.27□□□□□ -0.61
NCOA4-201ENST00000578454 ADAMTS8Q9UP79 889 aa11.27□□□□□ -0.61
NCOA4-201ENST00000578454 AATKQ6ZMQ8 1374 aa11.27□□□□□ -0.61
NCOA4-201ENST00000578454 XIRP1Q702N8 1843 aaKnown RBP11.27□□□□□ -0.61
NCOA4-201ENST00000578454 KIF1AQ12756 1690 aa11.27□□□□□ -0.61
NCOA4-201ENST00000578454 USP31Q70CQ4 1352 aa11.26□□□□□ -0.61
NCOA4-201ENST00000578454 FOXO3O43524 673 aa11.26□□□□□ -0.61
NCOA4-201ENST00000578454 ABTB2Q8N961 1025 aa11.26□□□□□ -0.61
NCOA4-201ENST00000578454 FBXO3Q9UK99 471 aa11.26□□□□□ -0.61
NCOA4-201ENST00000578454 OVOS2A0A0J9YW53 1432 aa11.26□□□□□ -0.61
NCOA4-201ENST00000578454 OVOS2Q6IE36 1432 aa11.26□□□□□ -0.61
NCOA4-201ENST00000578454 NLRP6P59044 892 aa11.25□□□□□ -0.61
NCOA4-201ENST00000578454 POLKQ9UBT6 870 aa11.25□□□□□ -0.61
NCOA4-201ENST00000578454 IFNLR1Q8IU57 520 aaPredicted RBP11.25□□□□□ -0.61
NCOA4-201ENST00000578454 NUDCQ9Y266 331 aa11.25□□□□□ -0.61
NCOA4-201ENST00000578454 ZBED9Q6R2W3 1325 aa11.25□□□□□ -0.61
NCOA4-201ENST00000578454 PPM1GO15355 546 aaPredicted RBP11.24□□□□□ -0.61
NCOA4-201ENST00000578454 SLC4A2P04920 1241 aa11.24□□□□□ -0.61
NCOA4-201ENST00000578454 MAP2P11137 1827 aaKnown RBP11.24□□□□□ -0.61
NCOA4-201ENST00000578454 KRT28Q7Z3Y7 464 aa11.24□□□□□ -0.61
NCOA4-201ENST00000578454 BLMP54132 1417 aaPredicted RBP11.24□□□□□ -0.61
NCOA4-201ENST00000578454 FBLN1P23142 703 aa11.23□□□□□ -0.61
NCOA4-201ENST00000578454 SLAIN2Q9P270 581 aa11.23□□□□□ -0.61
NCOA4-201ENST00000578454 PIK3C2AO00443 1686 aa11.23□□□□□ -0.61
NCOA4-201ENST00000578454 PNPLA6Q8IY17 1366 aa11.23□□□□□ -0.61
NCOA4-201ENST00000578454 DIAPH1O60610 1272 aaKnown RBP11.23□□□□□ -0.61
NCOA4-201ENST00000578454 SMG6Q86US8 1419 aaKnown RBP11.22□□□□□ -0.61
NCOA4-201ENST00000578454 EMILIN1Q9Y6C2 1016 aa11.22□□□□□ -0.61
NCOA4-201ENST00000578454 ATXN8OSP0DMR3 200 aa11.21□□□□□ -0.61
NCOA4-201ENST00000578454 RRS1Q15050 365 aaKnown RBP11.21□□□□□ -0.61
NCOA4-201ENST00000578454 NUTM2GQ5VZR2 741 aa11.21□□□□□ -0.61
NCOA4-201ENST00000578454 NPHP3Q7Z494 1330 aa11.21□□□□□ -0.61
NCOA4-201ENST00000578454 SHPRHQ149N8 1683 aa11.21□□□□□ -0.61
NCOA4-201ENST00000578454 PLEKHG5O94827 1062 aa11.21□□□□□ -0.62
NCOA4-201ENST00000578454 XPCQ01831 940 aaPredicted RBP11.21□□□□□ -0.62
NCOA4-201ENST00000578454 USP54Q70EL1 1684 aa11.21□□□□□ -0.62
NCOA4-201ENST00000578454 COL3A1P02461 1466 aaPredicted RBP11.21□□□□□ -0.62
NCOA4-201ENST00000578454 CDK12Q9NYV4 1490 aaPredicted RBP11.21□□□□□ -0.62
NCOA4-201ENST00000578454 SOX12O15370 315 aa11.2□□□□□ -0.62
NCOA4-201ENST00000578454 U2AF1L5P0DN76 240 aaPredicted RBP11.2□□□□□ -0.62
NCOA4-201ENST00000578454 U2AF1Q01081 240 aaKnown RBP eCLIP11.2□□□□□ -0.62
NCOA4-201ENST00000578454 U2SURPO15042 1029 aaKnown RBP11.2□□□□□ -0.62
NCOA4-201ENST00000578454 LMOD2Q6P5Q4 547 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms