RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 TRPM3Q9HCF6 1732 aaPredicted RBP18.28■□□□□ 0.52
CCDC57-211ENST00000578187 NBPF8Q3BBV2 869 aa18.27■□□□□ 0.52
CCDC57-211ENST00000578187 CCDC9Q9Y3X0 531 aaKnown RBP18.27■□□□□ 0.52
CCDC57-211ENST00000578187 PAK3O75914 559 aaPredicted RBP18.26■□□□□ 0.51
CCDC57-211ENST00000578187 CCDC125Q86Z20 511 aa18.26■□□□□ 0.51
CCDC57-211ENST00000578187 ROCK2O75116 1388 aaKnown RBP18.26■□□□□ 0.51
CCDC57-211ENST00000578187 PRR36Q9H6K5 1346 aa18.25■□□□□ 0.51
CCDC57-211ENST00000578187 ALS2Q96Q42 1657 aa18.25■□□□□ 0.51
CCDC57-211ENST00000578187 VPS72Q15906 364 aa18.25■□□□□ 0.51
CCDC57-211ENST00000578187 GLI3P10071 1580 aa18.25■□□□□ 0.51
CCDC57-211ENST00000578187 NUDT16Q96DE0 195 aaKnown RBP18.24■□□□□ 0.51
CCDC57-211ENST00000578187 ATP7BP35670 1465 aa18.24■□□□□ 0.51
CCDC57-211ENST00000578187 TOPAZ1Q8N9V7 1692 aa18.23■□□□□ 0.51
CCDC57-211ENST00000578187 COL14A1Q05707 1796 aaKnown RBP18.22■□□□□ 0.51
CCDC57-211ENST00000578187 CDK19Q9BWU1 502 aa18.22■□□□□ 0.51
CCDC57-211ENST00000578187 A0A0G2JS52 829 aa18.2■□□□□ 0.5
CCDC57-211ENST00000578187 FAM83GA6ND36 823 aa18.2■□□□□ 0.5
CCDC57-211ENST00000578187 MYT1Q01538 1121 aa18.2■□□□□ 0.5
CCDC57-211ENST00000578187 CCER1Q8TC90 406 aaPredicted RBP18.2■□□□□ 0.5
CCDC57-211ENST00000578187 TIMELESSQ9UNS1 1208 aa18.2■□□□□ 0.5
CCDC57-211ENST00000578187 CENPJQ9HC77 1338 aaPredicted RBP18.2■□□□□ 0.5
CCDC57-211ENST00000578187 SEPT12Q8IYM1 358 aa18.19■□□□□ 0.5
CCDC57-211ENST00000578187 BTG4Q9NY30 223 aa18.19■□□□□ 0.5
CCDC57-211ENST00000578187 CCDC61Q9Y6R9 512 aa18.19■□□□□ 0.5
CCDC57-211ENST00000578187 SF3B2Q13435 895 aaKnown RBP18.18■□□□□ 0.5
CCDC57-211ENST00000578187 NRAPQ86VF7 1730 aa18.18■□□□□ 0.5
CCDC57-211ENST00000578187 SRPK2P78362 688 aaKnown RBP18.17■□□□□ 0.5
CCDC57-211ENST00000578187 PRDM11Q9NQV5 511 aa18.17■□□□□ 0.5
CCDC57-211ENST00000578187 EP400Q96L91 3159 aa18.17■□□□□ 0.5
CCDC57-211ENST00000578187 POLR3AO14802 1390 aaPredicted RBP18.17■□□□□ 0.5
CCDC57-211ENST00000578187 BLMP54132 1417 aaPredicted RBP18.16■□□□□ 0.5
CCDC57-211ENST00000578187 CRYBG1Q9Y4K1 1723 aa18.16■□□□□ 0.5
CCDC57-211ENST00000578187 ZRANB1Q9UGI0 708 aa18.16■□□□□ 0.5
CCDC57-211ENST00000578187 BRWD3Q6RI45 1802 aa18.16■□□□□ 0.5
CCDC57-211ENST00000578187 KRT27Q7Z3Y8 459 aa18.15■□□□□ 0.5
CCDC57-211ENST00000578187 ACEP12821 1306 aa18.15■□□□□ 0.5
CCDC57-211ENST00000578187 PHRF1Q9P1Y6 1649 aaKnown RBP18.14■□□□□ 0.49
CCDC57-211ENST00000578187 ONECUT3O60422 494 aaPredicted RBP18.14■□□□□ 0.49
CCDC57-211ENST00000578187 CARD11Q9BXL7 1154 aa18.14■□□□□ 0.49
CCDC57-211ENST00000578187 SBNO2Q9Y2G9 1366 aa18.14■□□□□ 0.49
CCDC57-211ENST00000578187 PLEKHG3A1L390 1219 aa18.13■□□□□ 0.49
CCDC57-211ENST00000578187 PPIP5K1Q6PFW1 1433 aa18.13■□□□□ 0.49
CCDC57-211ENST00000578187 FAM98CQ17RN3 349 aaKnown RBP18.12■□□□□ 0.49
CCDC57-211ENST00000578187 NCBP3Q53F19 620 aaKnown RBP18.11■□□□□ 0.49
CCDC57-211ENST00000578187 ABTB2Q8N961 1025 aa18.11■□□□□ 0.49
CCDC57-211ENST00000578187 KIAA0232Q92628 1395 aa18.11■□□□□ 0.49
CCDC57-211ENST00000578187 BRD4O60885 1362 aaPredicted RBP18.09■□□□□ 0.49
CCDC57-211ENST00000578187 SPATA31A5Q5VU36 1347 aa18.09■□□□□ 0.49
CCDC57-211ENST00000578187 EVC2Q86UK5 1308 aa18.09■□□□□ 0.49
CCDC57-211ENST00000578187 SPATA31A7Q8IWB4 1347 aa18.09■□□□□ 0.49
CCDC57-211ENST00000578187 NUTM2GQ5VZR2 741 aa18.09■□□□□ 0.49
CCDC57-211ENST00000578187 ZC3H6P61129 1189 aaKnown RBP18.08■□□□□ 0.48
CCDC57-211ENST00000578187 CABP2Q9NPB3 220 aa18.08■□□□□ 0.48
CCDC57-211ENST00000578187 EVA1CP58658 441 aa18.07■□□□□ 0.48
CCDC57-211ENST00000578187 NLRP13Q86W25 1043 aa18.07■□□□□ 0.48
CCDC57-211ENST00000578187 STRN4Q9NRL3 753 aa18.07■□□□□ 0.48
CCDC57-211ENST00000578187 NRKQ7Z2Y5 1582 aa18.06■□□□□ 0.48
CCDC57-211ENST00000578187 CHRNA2Q15822 529 aa18.06■□□□□ 0.48
CCDC57-211ENST00000578187 AKAP12Q02952 1782 aa18.05■□□□□ 0.48
CCDC57-211ENST00000578187 BAG6P46379 1132 aa18.05■□□□□ 0.48
CCDC57-211ENST00000578187 CPDO75976 1380 aa18.04■□□□□ 0.48
CCDC57-211ENST00000578187 USP47Q96K76 1375 aa18.04■□□□□ 0.48
CCDC57-211ENST00000578187 SPATA31A1Q5TZJ5 1347 aa18.03■□□□□ 0.48
CCDC57-211ENST00000578187 THSD7AQ9UPZ6 1657 aa18.03■□□□□ 0.48
CCDC57-211ENST00000578187 CABP1Q9NZU7 370 aa18.03■□□□□ 0.48
CCDC57-211ENST00000578187 RGPD1P0DJD0 1748 aa18.03■□□□□ 0.48
CCDC57-211ENST00000578187 USP19O94966 1318 aa18.02■□□□□ 0.48
CCDC57-211ENST00000578187 USP6P35125 1406 aa18.02■□□□□ 0.48
CCDC57-211ENST00000578187 DEFB132Q7Z7B7 95 aa18.02■□□□□ 0.48
CCDC57-211ENST00000578187 MON2Q7Z3U7 1717 aa18.01■□□□□ 0.47
CCDC57-211ENST00000578187 SSH2Q76I76 1423 aa18■□□□□ 0.47
CCDC57-211ENST00000578187 GCP02774 474 aa18■□□□□ 0.47
CCDC57-211ENST00000578187 TESK2Q96S53 571 aa18■□□□□ 0.47
CCDC57-211ENST00000578187 USP35Q9P2H5 1018 aa18■□□□□ 0.47
CCDC57-211ENST00000578187 NLRP6P59044 892 aa17.99■□□□□ 0.47
CCDC57-211ENST00000578187 ZNF692Q9BU19 519 aaPredicted RBP17.99■□□□□ 0.47
CCDC57-211ENST00000578187 ST20-MTHFSA0A0A6YYL1 179 aa17.98■□□□□ 0.47
CCDC57-211ENST00000578187 MAPK8IP2Q13387 824 aaPredicted RBP17.98■□□□□ 0.47
CCDC57-211ENST00000578187 CNKSR2Q8WXI2 1034 aa17.98■□□□□ 0.47
CCDC57-211ENST00000578187 LMO7Q8WWI1 1683 aa17.98■□□□□ 0.47
CCDC57-211ENST00000578187 CAMTA1Q9Y6Y1 1673 aa17.97■□□□□ 0.47
CCDC57-211ENST00000578187 ZBTB7CA1YPR0 619 aa17.97■□□□□ 0.47
CCDC57-211ENST00000578187 PDE3BQ13370 1112 aa17.97■□□□□ 0.47
CCDC57-211ENST00000578187 FAM196AQ6ZSG2 479 aa17.97■□□□□ 0.47
CCDC57-211ENST00000578187 BARGINQ6ZT62 677 aa17.97■□□□□ 0.47
CCDC57-211ENST00000578187 THRAP3Q9Y2W1 955 aaKnown RBP17.97■□□□□ 0.47
CCDC57-211ENST00000578187 TCP11L2Q8N4U5 519 aa17.96■□□□□ 0.47
CCDC57-211ENST00000578187 SLIT3O75094 1523 aa17.95■□□□□ 0.46
CCDC57-211ENST00000578187 FAM182BQ5T319 152 aa17.95■□□□□ 0.46
CCDC57-211ENST00000578187 LARP1Q6PKG0 1096 aaKnown RBP17.95■□□□□ 0.46
CCDC57-211ENST00000578187 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
CCDC57-211ENST00000578187 PIK3C2AO00443 1686 aa17.94■□□□□ 0.46
CCDC57-211ENST00000578187 PUS7Q96PZ0 661 aaKnown RBP17.94■□□□□ 0.46
CCDC57-211ENST00000578187 TTC21AQ8NDW8 1320 aa17.94■□□□□ 0.46
CCDC57-211ENST00000578187 CRB1P82279 1406 aa17.93■□□□□ 0.46
CCDC57-211ENST00000578187 SLC24A1O60721 1099 aa17.93■□□□□ 0.46
CCDC57-211ENST00000578187 KCNH5Q8NCM2 988 aa17.93■□□□□ 0.46
CCDC57-211ENST00000578187 CD163L1Q9NR16 1453 aa17.93■□□□□ 0.46
CCDC57-211ENST00000578187 MYOM1P52179 1685 aa17.93■□□□□ 0.46
CCDC57-211ENST00000578187 AATKQ6ZMQ8 1374 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms