RNA–Protein interactions for RNA: ENST00000578061.5

LIMD2-202, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LIMD2, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-202ENST00000578061 EVC2Q86UK5 1308 aa29.44■■■□□ 2.3
LIMD2-202ENST00000578061 ATRNO75882 1429 aa29.43■■■□□ 2.3
LIMD2-202ENST00000578061 ABCA3Q99758 1704 aa29.42■■■□□ 2.3
LIMD2-202ENST00000578061 NUTM2GQ5VZR2 741 aa29.42■■■□□ 2.3
LIMD2-202ENST00000578061 RGS12O14924 1447 aa29.41■■■□□ 2.3
LIMD2-202ENST00000578061 CABP1Q9NZU7 370 aa29.41■■■□□ 2.3
LIMD2-202ENST00000578061 CDK12Q9NYV4 1490 aaPredicted RBP29.41■■■□□ 2.3
LIMD2-202ENST00000578061 SLIT2O94813 1529 aa29.39■■■□□ 2.3
LIMD2-202ENST00000578061 FAM83GA6ND36 823 aa29.38■■■□□ 2.29
LIMD2-202ENST00000578061 UNC5CLQ8IV45 518 aa29.38■■■□□ 2.29
LIMD2-202ENST00000578061 ABTB2Q8N961 1025 aa29.33■■■□□ 2.29
LIMD2-202ENST00000578061 GJD4Q96KN9 370 aaPredicted RBP29.33■■■□□ 2.29
LIMD2-202ENST00000578061 PLCH1Q4KWH8 1693 aa29.31■■■□□ 2.28
LIMD2-202ENST00000578061 CRYBG1Q9Y4K1 1723 aa29.3■■■□□ 2.28
LIMD2-202ENST00000578061 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.29■■■□□ 2.28
LIMD2-202ENST00000578061 SBNO2Q9Y2G9 1366 aa29.28■■■□□ 2.28
LIMD2-202ENST00000578061 BTG4Q9NY30 223 aa29.28■■■□□ 2.28
LIMD2-202ENST00000578061 CCDC9Q9Y3X0 531 aaKnown RBP29.28■■■□□ 2.28
LIMD2-202ENST00000578061 PRDM11Q9NQV5 511 aa29.27■■■□□ 2.28
LIMD2-202ENST00000578061 USP6P35125 1406 aa29.27■■■□□ 2.28
LIMD2-202ENST00000578061 ZC3H6P61129 1189 aaKnown RBP29.26■■■□□ 2.27
LIMD2-202ENST00000578061 UPF1Q92900 1129 aaKnown RBP eCLIP29.26■■■□□ 2.272e-6■■□□□ 12.9
LIMD2-202ENST00000578061 VPS72Q15906 364 aa29.25■■■□□ 2.27
LIMD2-202ENST00000578061 GLI3P10071 1580 aa29.25■■■□□ 2.27
LIMD2-202ENST00000578061 ATAD2Q6PL18 1390 aa29.25■■■□□ 2.27
LIMD2-202ENST00000578061 KIAA0232Q92628 1395 aa29.25■■■□□ 2.27
LIMD2-202ENST00000578061 PHRF1Q9P1Y6 1649 aaKnown RBP29.24■■■□□ 2.27
LIMD2-202ENST00000578061 ST20-MTHFSA0A0A6YYL1 179 aa29.24■■■□□ 2.27
LIMD2-202ENST00000578061 CHRNA2Q15822 529 aa29.24■■■□□ 2.27
LIMD2-202ENST00000578061 NWD2Q9ULI1 1742 aa29.24■■■□□ 2.27
LIMD2-202ENST00000578061 CLSPNQ9HAW4 1339 aa29.23■■■□□ 2.27
LIMD2-202ENST00000578061 COL14A1Q05707 1796 aaKnown RBP29.23■■■□□ 2.27
LIMD2-202ENST00000578061 NLRP13Q86W25 1043 aa29.22■■■□□ 2.27
LIMD2-202ENST00000578061 CCER1Q8TC90 406 aaPredicted RBP29.22■■■□□ 2.27
LIMD2-202ENST00000578061 TMC1Q8TDI8 760 aa29.2■■■□□ 2.26
LIMD2-202ENST00000578061 BRD4O60885 1362 aaPredicted RBP29.2■■■□□ 2.26
LIMD2-202ENST00000578061 USP19O94966 1318 aa29.2■■■□□ 2.26
LIMD2-202ENST00000578061 NLRP6P59044 892 aa29.19■■■□□ 2.26
LIMD2-202ENST00000578061 SSH2Q76I76 1423 aa29.19■■■□□ 2.26
LIMD2-202ENST00000578061 NRAPQ86VF7 1730 aa29.18■■■□□ 2.26
LIMD2-202ENST00000578061 TESK2Q96S53 571 aa29.18■■■□□ 2.26
LIMD2-202ENST00000578061 ZNF692Q9BU19 519 aaPredicted RBP29.18■■■□□ 2.26
LIMD2-202ENST00000578061 NRKQ7Z2Y5 1582 aa29.18■■■□□ 2.26
LIMD2-202ENST00000578061 TIMELESSQ9UNS1 1208 aa29.17■■■□□ 2.26
LIMD2-202ENST00000578061 TTC21BQ7Z4L5 1316 aa29.17■■■□□ 2.26
LIMD2-202ENST00000578061 GCP02774 474 aa29.16■■■□□ 2.26
LIMD2-202ENST00000578061 KTN1Q86UP2 1357 aaKnown RBP29.15■■■□□ 2.26
LIMD2-202ENST00000578061 CPSF1Q10570 1443 aaKnown RBP29.15■■■□□ 2.26
LIMD2-202ENST00000578061 SLC12A5Q9H2X9 1139 aa29.15■■■□□ 2.26
LIMD2-202ENST00000578061 USP47Q96K76 1375 aa29.14■■■□□ 2.26
LIMD2-202ENST00000578061 AKAP12Q02952 1782 aa29.14■■■□□ 2.26
LIMD2-202ENST00000578061 SEPT12Q8IYM1 358 aa29.14■■■□□ 2.26
LIMD2-202ENST00000578061 STRN4Q9NRL3 753 aa29.14■■■□□ 2.26
LIMD2-202ENST00000578061 ZBTB7CA1YPR0 619 aa29.13■■■□□ 2.25
LIMD2-202ENST00000578061 PIK3C2AO00443 1686 aa29.12■■■□□ 2.25
LIMD2-202ENST00000578061 A0A0G2JS52 829 aa29.11■■■□□ 2.25
LIMD2-202ENST00000578061 MYT1Q01538 1121 aa29.11■■■□□ 2.25
LIMD2-202ENST00000578061 FAM98CQ17RN3 349 aaKnown RBP29.11■■■□□ 2.25
LIMD2-202ENST00000578061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.1■■■□□ 2.25
LIMD2-202ENST00000578061 CPDO75976 1380 aa29.1■■■□□ 2.25
LIMD2-202ENST00000578061 CD163L1Q9NR16 1453 aa29.1■■■□□ 2.25
LIMD2-202ENST00000578061 SPATA31A5Q5VU36 1347 aa29.09■■■□□ 2.25
LIMD2-202ENST00000578061 SPATA31A7Q8IWB4 1347 aa29.09■■■□□ 2.25
LIMD2-202ENST00000578061 SOX12O15370 315 aa29.08■■■□□ 2.25
LIMD2-202ENST00000578061 ONECUT3O60422 494 aaPredicted RBP29.08■■■□□ 2.25
LIMD2-202ENST00000578061 TTC21AQ8NDW8 1320 aa29.08■■■□□ 2.25
LIMD2-202ENST00000578061 EVA1CP58658 441 aa29.07■■■□□ 2.24
LIMD2-202ENST00000578061 HDGFL2Q7Z4V5 671 aaPredicted RBP29.07■■■□□ 2.24
LIMD2-202ENST00000578061 SLIT3O75094 1523 aa29.06■■■□□ 2.24
LIMD2-202ENST00000578061 PUS7Q96PZ0 661 aaKnown RBP29.06■■■□□ 2.24
LIMD2-202ENST00000578061 ZRANB1Q9UGI0 708 aa29.06■■■□□ 2.24
LIMD2-202ENST00000578061 CAMTA1Q9Y6Y1 1673 aa29.05■■■□□ 2.24
LIMD2-202ENST00000578061 MON2Q7Z3U7 1717 aa29.05■■■□□ 2.24
LIMD2-202ENST00000578061 BRWD3Q6RI45 1802 aa29.04■■■□□ 2.24
LIMD2-202ENST00000578061 A0A1W2PP64 1363 aa29.03■■■□□ 2.24
LIMD2-202ENST00000578061 NME9Q86XW9 330 aa29.03■■■□□ 2.24
LIMD2-202ENST00000578061 TERF2IPQ9NYB0 399 aa29.03■■■□□ 2.24
LIMD2-202ENST00000578061 USP35Q9P2H5 1018 aa29.03■■■□□ 2.24
LIMD2-202ENST00000578061 SPATA31A1Q5TZJ5 1347 aa29.02■■■□□ 2.24
LIMD2-202ENST00000578061 SLC24A1O60721 1099 aa29.02■■■□□ 2.24
LIMD2-202ENST00000578061 TMF1P82094 1093 aa29.02■■■□□ 2.24
LIMD2-202ENST00000578061 EP400Q96L91 3159 aa29.01■■■□□ 2.24
LIMD2-202ENST00000578061 LARP1Q6PKG0 1096 aaKnown RBP29.01■■■□□ 2.23
LIMD2-202ENST00000578061 KRT27Q7Z3Y8 459 aa29.01■■■□□ 2.23
LIMD2-202ENST00000578061 LMO7Q8WWI1 1683 aa29.01■■■□□ 2.23
LIMD2-202ENST00000578061 KCNH5Q8NCM2 988 aa28.98■■■□□ 2.23
LIMD2-202ENST00000578061 EDC4Q6P2E9 1401 aaKnown RBP28.97■■■□□ 2.23
LIMD2-202ENST00000578061 AATKQ6ZMQ8 1374 aa28.97■■■□□ 2.23
LIMD2-202ENST00000578061 ARHGEF25Q86VW2 580 aa28.95■■■□□ 2.22
LIMD2-202ENST00000578061 NINLQ9Y2I6 1382 aa28.95■■■□□ 2.22
LIMD2-202ENST00000578061 COL5A2P05997 1499 aaPredicted RBP28.95■■■□□ 2.22
LIMD2-202ENST00000578061 USP31Q70CQ4 1352 aa28.94■■■□□ 2.22
LIMD2-202ENST00000578061 AXIN2Q9Y2T1 843 aa28.94■■■□□ 2.22
LIMD2-202ENST00000578061 FAM182BQ5T319 152 aa28.93■■■□□ 2.22
LIMD2-202ENST00000578061 NFAT5O94916 1531 aa28.92■■■□□ 2.22
LIMD2-202ENST00000578061 THSD7AQ9UPZ6 1657 aa28.92■■■□□ 2.22
LIMD2-202ENST00000578061 TCP11L2Q8N4U5 519 aa28.9■■■□□ 2.22
LIMD2-202ENST00000578061 COL18A1P39060 1754 aa28.9■■■□□ 2.22
LIMD2-202ENST00000578061 CDCA8Q53HL2 280 aa28.89■■■□□ 2.22
LIMD2-202ENST00000578061 CCDC125Q86Z20 511 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms