RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 PHRF1Q9P1Y6 1649 aaKnown RBP24.1■■□□□ 1.45
CDK5RAP3-206ENST00000578018 POLR3AO14802 1390 aaPredicted RBP24.09■■□□□ 1.45
CDK5RAP3-206ENST00000578018 QRICH2Q9H0J4 1663 aa24.08■■□□□ 1.45
CDK5RAP3-206ENST00000578018 PAK3O75914 559 aaPredicted RBP24.08■■□□□ 1.45
CDK5RAP3-206ENST00000578018 CCDC125Q86Z20 511 aa24.06■■□□□ 1.44
CDK5RAP3-206ENST00000578018 SEPT12Q8IYM1 358 aa24.06■■□□□ 1.44
CDK5RAP3-206ENST00000578018 CCDC9Q9Y3X0 531 aaKnown RBP24.06■■□□□ 1.44
CDK5RAP3-206ENST00000578018 ONECUT3O60422 494 aaPredicted RBP24.05■■□□□ 1.44
CDK5RAP3-206ENST00000578018 BTG4Q9NY30 223 aa24.05■■□□□ 1.44
CDK5RAP3-206ENST00000578018 CCDC61Q9Y6R9 512 aa24.05■■□□□ 1.44
CDK5RAP3-206ENST00000578018 TRPM1Q7Z4N2 1603 aa24.05■■□□□ 1.44
CDK5RAP3-206ENST00000578018 CENPJQ9HC77 1338 aaPredicted RBP24.05■■□□□ 1.44
CDK5RAP3-206ENST00000578018 L3MBTL2Q969R5 705 aa24.04■■□□□ 1.44
CDK5RAP3-206ENST00000578018 ACEP12821 1306 aa24.04■■□□□ 1.44
CDK5RAP3-206ENST00000578018 BLMP54132 1417 aaPredicted RBP24.03■■□□□ 1.44
CDK5RAP3-206ENST00000578018 PLEKHG3A1L390 1219 aa24.03■■□□□ 1.44
CDK5RAP3-206ENST00000578018 NBPF8Q3BBV2 869 aa24.01■■□□□ 1.43
CDK5RAP3-206ENST00000578018 PRDM11Q9NQV5 511 aa24.01■■□□□ 1.43
CDK5RAP3-206ENST00000578018 NRKQ7Z2Y5 1582 aa24■■□□□ 1.43
CDK5RAP3-206ENST00000578018 KIAA0232Q92628 1395 aa24■■□□□ 1.43
CDK5RAP3-206ENST00000578018 PPIP5K1Q6PFW1 1433 aa24■■□□□ 1.43
CDK5RAP3-206ENST00000578018 SIN3AQ96ST3 1273 aa23.99■■□□□ 1.43
CDK5RAP3-206ENST00000578018 THSD7AQ9UPZ6 1657 aa23.99■■□□□ 1.43
CDK5RAP3-206ENST00000578018 SRCAPQ6ZRS2 3230 aa23.98■■□□□ 1.43
CDK5RAP3-206ENST00000578018 SRPK2P78362 688 aaKnown RBP23.98■■□□□ 1.43
CDK5RAP3-206ENST00000578018 KRT27Q7Z3Y8 459 aa23.98■■□□□ 1.43
CDK5RAP3-206ENST00000578018 FAM98CQ17RN3 349 aaKnown RBP23.97■■□□□ 1.43
CDK5RAP3-206ENST00000578018 SPATA31A5Q5VU36 1347 aa23.97■■□□□ 1.43
CDK5RAP3-206ENST00000578018 SPATA31A7Q8IWB4 1347 aa23.97■■□□□ 1.43
CDK5RAP3-206ENST00000578018 NUTM2GQ5VZR2 741 aa23.96■■□□□ 1.43
CDK5RAP3-206ENST00000578018 CABP2Q9NPB3 220 aa23.95■■□□□ 1.42
CDK5RAP3-206ENST00000578018 A0A0G2JS52 829 aa23.94■■□□□ 1.42
CDK5RAP3-206ENST00000578018 MYT1Q01538 1121 aa23.94■■□□□ 1.42
CDK5RAP3-206ENST00000578018 USP19O94966 1318 aa23.93■■□□□ 1.42
CDK5RAP3-206ENST00000578018 CHRNA2Q15822 529 aa23.93■■□□□ 1.42
CDK5RAP3-206ENST00000578018 LMO7Q8WWI1 1683 aa23.92■■□□□ 1.42
CDK5RAP3-206ENST00000578018 ZC3H6P61129 1189 aaKnown RBP23.92■■□□□ 1.42
CDK5RAP3-206ENST00000578018 NEUROD1Q13562 356 aa23.92■■□□□ 1.42
CDK5RAP3-206ENST00000578018 ABTB2Q8N961 1025 aa23.92■■□□□ 1.42
CDK5RAP3-206ENST00000578018 ZRANB1Q9UGI0 708 aa23.92■■□□□ 1.42
CDK5RAP3-206ENST00000578018 ROCK2O75116 1388 aaKnown RBP23.91■■□□□ 1.42
CDK5RAP3-206ENST00000578018 BRD4O60885 1362 aaPredicted RBP23.91■■□□□ 1.42
CDK5RAP3-206ENST00000578018 CPDO75976 1380 aa23.91■■□□□ 1.42
CDK5RAP3-206ENST00000578018 DEFB132Q7Z7B7 95 aa23.9■■□□□ 1.42
CDK5RAP3-206ENST00000578018 USP6P35125 1406 aa23.9■■□□□ 1.42
CDK5RAP3-206ENST00000578018 SPATA31A1Q5TZJ5 1347 aa23.89■■□□□ 1.42
CDK5RAP3-206ENST00000578018 CAMTA1Q9Y6Y1 1673 aa23.89■■□□□ 1.41
CDK5RAP3-206ENST00000578018 RGPD1P0DJD0 1748 aa23.88■■□□□ 1.41
CDK5RAP3-206ENST00000578018 SF3B2Q13435 895 aaKnown RBP23.88■■□□□ 1.41
CDK5RAP3-206ENST00000578018 EVC2Q86UK5 1308 aa23.87■■□□□ 1.41
CDK5RAP3-206ENST00000578018 SSH2Q76I76 1423 aa23.87■■□□□ 1.41
CDK5RAP3-206ENST00000578018 STRN4Q9NRL3 753 aa23.87■■□□□ 1.41
CDK5RAP3-206ENST00000578018 CABP1Q9NZU7 370 aa23.87■■□□□ 1.41
CDK5RAP3-206ENST00000578018 PIK3C2AO00443 1686 aa23.86■■□□□ 1.41
CDK5RAP3-206ENST00000578018 SLIT3O75094 1523 aa23.85■■□□□ 1.41
CDK5RAP3-206ENST00000578018 NLRP13Q86W25 1043 aa23.85■■□□□ 1.41
CDK5RAP3-206ENST00000578018 AKAP12Q02952 1782 aa23.85■■□□□ 1.41
CDK5RAP3-206ENST00000578018 TNS1Q9HBL0 1735 aaKnown RBP23.84■■□□□ 1.41
CDK5RAP3-206ENST00000578018 GCP02774 474 aa23.82■■□□□ 1.4
CDK5RAP3-206ENST00000578018 FAM182BQ5T319 152 aa23.82■■□□□ 1.4
CDK5RAP3-206ENST00000578018 COL5A2P05997 1499 aaPredicted RBP23.81■■□□□ 1.4
CDK5RAP3-206ENST00000578018 EVA1CP58658 441 aa23.79■■□□□ 1.4
CDK5RAP3-206ENST00000578018 LARP1Q6PKG0 1096 aaKnown RBP23.79■■□□□ 1.4
CDK5RAP3-206ENST00000578018 SBNO2Q9Y2G9 1366 aa23.78■■□□□ 1.4
CDK5RAP3-206ENST00000578018 BAG6P46379 1132 aa23.78■■□□□ 1.4
CDK5RAP3-206ENST00000578018 BARGINQ6ZT62 677 aa23.78■■□□□ 1.4
CDK5RAP3-206ENST00000578018 USP35Q9P2H5 1018 aa23.78■■□□□ 1.4
CDK5RAP3-206ENST00000578018 DISP2A7MBM2 1401 aa23.77■■□□□ 1.4
CDK5RAP3-206ENST00000578018 NLRP6P59044 892 aa23.77■■□□□ 1.4
CDK5RAP3-206ENST00000578018 MON2Q7Z3U7 1717 aa23.76■■□□□ 1.39
CDK5RAP3-206ENST00000578018 COL18A1P39060 1754 aa23.76■■□□□ 1.39
CDK5RAP3-206ENST00000578018 PARP4Q9UKK3 1724 aaKnown RBP23.76■■□□□ 1.39
CDK5RAP3-206ENST00000578018 CPSF1Q10570 1443 aaKnown RBP23.75■■□□□ 1.39
CDK5RAP3-206ENST00000578018 TCP11L2Q8N4U5 519 aa23.74■■□□□ 1.39
CDK5RAP3-206ENST00000578018 AATKQ6ZMQ8 1374 aa23.74■■□□□ 1.39
CDK5RAP3-206ENST00000578018 TONSLQ96HA7 1378 aa23.73■■□□□ 1.39
CDK5RAP3-206ENST00000578018 CRB1P82279 1406 aa23.73■■□□□ 1.39
CDK5RAP3-206ENST00000578018 ZNF692Q9BU19 519 aaPredicted RBP23.72■■□□□ 1.39
CDK5RAP3-206ENST00000578018 TTC21BQ7Z4L5 1316 aa23.72■■□□□ 1.39
CDK5RAP3-206ENST00000578018 EN1Q05925 392 aaPredicted RBP23.71■■□□□ 1.39
CDK5RAP3-206ENST00000578018 FAM196AQ6ZSG2 479 aa23.71■■□□□ 1.39
CDK5RAP3-206ENST00000578018 CARD11Q9BXL7 1154 aa23.71■■□□□ 1.39
CDK5RAP3-206ENST00000578018 THRAP3Q9Y2W1 955 aaKnown RBP23.71■■□□□ 1.39
CDK5RAP3-206ENST00000578018 WNK3Q9BYP7 1800 aa23.7■■□□□ 1.39
CDK5RAP3-206ENST00000578018 TTC21AQ8NDW8 1320 aa23.7■■□□□ 1.38
CDK5RAP3-206ENST00000578018 ZBTB7CA1YPR0 619 aa23.7■■□□□ 1.38
CDK5RAP3-206ENST00000578018 LRP5O75197 1615 aa23.7■■□□□ 1.38
CDK5RAP3-206ENST00000578018 KTN1Q86UP2 1357 aaKnown RBP23.69■■□□□ 1.38
CDK5RAP3-206ENST00000578018 USP54Q70EL1 1684 aa23.69■■□□□ 1.38
CDK5RAP3-206ENST00000578018 NFAT5O94916 1531 aa23.69■■□□□ 1.38
CDK5RAP3-206ENST00000578018 RGPD5Q99666 1765 aa23.68■■□□□ 1.38
CDK5RAP3-206ENST00000578018 LRRC37A3O60309 1634 aa23.68■■□□□ 1.38
CDK5RAP3-206ENST00000578018 CD163L1Q9NR16 1453 aa23.68■■□□□ 1.38
CDK5RAP3-206ENST00000578018 TRIM37O94972 964 aa23.67■■□□□ 1.38
CDK5RAP3-206ENST00000578018 PDE3BQ13370 1112 aa23.67■■□□□ 1.38
CDK5RAP3-206ENST00000578018 PEAK1Q9H792 1746 aa23.65■■□□□ 1.38
CDK5RAP3-206ENST00000578018 ARHGEF25Q86VW2 580 aa23.65■■□□□ 1.38
CDK5RAP3-206ENST00000578018 KCNH5Q8NCM2 988 aa23.65■■□□□ 1.38
CDK5RAP3-206ENST00000578018 RREB1Q92766 1687 aa23.64■■□□□ 1.38
CDK5RAP3-206ENST00000578018 PSDA5PKW4 1024 aaPredicted RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms