RNA–Protein interactions for RNA: ENST00000577906.1

SNRPD1-202, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 2

Gene SNRPD1, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-202ENST00000577906 RFC5P40937 340 aa13.42□□□□□ -0.26
SNRPD1-202ENST00000577906 SKOR1P84550 965 aa13.42□□□□□ -0.26
SNRPD1-202ENST00000577906 RC3H1Q5TC82 1133 aaKnown RBP13.42□□□□□ -0.26
SNRPD1-202ENST00000577906 CYP4X1Q8N118 509 aa13.42□□□□□ -0.26
SNRPD1-202ENST00000577906 BAP1Q92560 729 aa13.41□□□□□ -0.26
SNRPD1-202ENST00000577906 ARMC2Q8NEN0 867 aa13.4□□□□□ -0.26
SNRPD1-202ENST00000577906 MRGPRX2Q96LB1 330 aa13.4□□□□□ -0.26
SNRPD1-202ENST00000577906 SH3BP2P78314 561 aa13.39□□□□□ -0.27
SNRPD1-202ENST00000577906 LINC01559Q495D7 138 aa13.39□□□□□ -0.27
SNRPD1-202ENST00000577906 TMEM259Q4ZIN3 620 aa13.39□□□□□ -0.27
SNRPD1-202ENST00000577906 ZNF511Q8NB15 262 aa13.38□□□□□ -0.27
SNRPD1-202ENST00000577906 TOR4AQ9NXH8 423 aa13.38□□□□□ -0.27
SNRPD1-202ENST00000577906 TTC24A2A3L6 582 aaPredicted RBP13.37□□□□□ -0.27
SNRPD1-202ENST00000577906 DGAT1O75907 488 aa13.37□□□□□ -0.27
SNRPD1-202ENST00000577906 PKDCCQ504Y2 493 aa13.37□□□□□ -0.27
SNRPD1-202ENST00000577906 EHBP1Q8NDI1 1231 aa13.37□□□□□ -0.27
SNRPD1-202ENST00000577906 SNIP1Q8TAD8 396 aaKnown RBP13.37□□□□□ -0.27
SNRPD1-202ENST00000577906 LRRN4Q8WUT4 740 aa13.36□□□□□ -0.27
SNRPD1-202ENST00000577906 FAM187AA6NFU0 413 aa13.35□□□□□ -0.27
SNRPD1-202ENST00000577906 USP17L8P0C7I0 530 aa13.33□□□□□ -0.28
SNRPD1-202ENST00000577906 NBPF14Q5TI25 921 aa13.33□□□□□ -0.28
SNRPD1-202ENST00000577906 VARSP26640 1264 aaKnown RBP13.32□□□□□ -0.28
SNRPD1-202ENST00000577906 TRAF7Q6Q0C0 670 aa13.32□□□□□ -0.28
SNRPD1-202ENST00000577906 GPKOWQ92917 476 aaPredicted RBP eCLIP13.31□□□□□ -0.28
SNRPD1-202ENST00000577906 AGERQ15109 404 aa13.29□□□□□ -0.28
SNRPD1-202ENST00000577906 NR6A1Q15406 480 aa13.29□□□□□ -0.28
SNRPD1-202ENST00000577906 BPHLQ86WA6 291 aaPredicted RBP13.29□□□□□ -0.28
SNRPD1-202ENST00000577906 PNMA1Q8ND90 353 aa13.29□□□□□ -0.28
SNRPD1-202ENST00000577906 SIAH2O43255 324 aa13.28□□□□□ -0.28
SNRPD1-202ENST00000577906 FOXJ1Q92949 421 aa13.28□□□□□ -0.28
SNRPD1-202ENST00000577906 BANK1Q8NDB2 785 aa13.27□□□□□ -0.29
SNRPD1-202ENST00000577906 FAM174AQ8TBP5 190 aa13.27□□□□□ -0.29
SNRPD1-202ENST00000577906 FKBPLQ9UIM3 349 aa13.27□□□□□ -0.29
SNRPD1-202ENST00000577906 ALDH1A1P00352 501 aa13.26□□□□□ -0.29
SNRPD1-202ENST00000577906 SMPD1P17405 629 aa13.26□□□□□ -0.29
SNRPD1-202ENST00000577906 ZC3H4Q9UPT8 1303 aaKnown RBP13.26□□□□□ -0.29
SNRPD1-202ENST00000577906 J3QL48 77 aa13.24□□□□□ -0.29
SNRPD1-202ENST00000577906 MYT1Q01538 1121 aa13.24□□□□□ -0.29
SNRPD1-202ENST00000577906 PDXDC2PQ6P474 469 aa13.24□□□□□ -0.29
SNRPD1-202ENST00000577906 MPNDQ8N594 471 aa13.24□□□□□ -0.29
SNRPD1-202ENST00000577906 HMX1Q9NP08 348 aaPredicted RBP13.24□□□□□ -0.29
SNRPD1-202ENST00000577906 AVPP01185 164 aa13.23□□□□□ -0.29
SNRPD1-202ENST00000577906 SH3BP5LQ7L8J4 393 aa13.22□□□□□ -0.29
SNRPD1-202ENST00000577906 WASF2Q9Y6W5 498 aa13.22□□□□□ -0.29
SNRPD1-202ENST00000577906 LCE2BO14633 110 aa13.21□□□□□ -0.29
SNRPD1-202ENST00000577906 SH3RF1Q7Z6J0 888 aa13.21□□□□□ -0.29
SNRPD1-202ENST00000577906 EPS8L1Q8TE68 723 aa13.21□□□□□ -0.29
SNRPD1-202ENST00000577906 C4orf48Q5BLP8 95 aa13.2□□□□□ -0.3
SNRPD1-202ENST00000577906 CTC1Q2NKJ3 1217 aa13.19□□□□□ -0.3
SNRPD1-202ENST00000577906 TLL2Q9Y6L7 1015 aa13.19□□□□□ -0.3
SNRPD1-202ENST00000577906 MAGEB6P1A0A0J9YX57 407 aa13.18□□□□□ -0.3
SNRPD1-202ENST00000577906 APBB1O00213 710 aa13.18□□□□□ -0.3
SNRPD1-202ENST00000577906 SOCS7O14512 581 aa13.18□□□□□ -0.3
SNRPD1-202ENST00000577906 CRIPAKQ8N1N5 446 aa13.18□□□□□ -0.3
SNRPD1-202ENST00000577906 ARHGAP9Q9BRR9 750 aa13.18□□□□□ -0.3
SNRPD1-202ENST00000577906 TRIM34Q9BYJ4 488 aa13.18□□□□□ -0.3
SNRPD1-202ENST00000577906 GPSM3Q9Y4H4 160 aa13.18□□□□□ -0.3
SNRPD1-202ENST00000577906 PTK2Q05397 1052 aa13.17□□□□□ -0.3
SNRPD1-202ENST00000577906 CDK15Q96Q40 435 aa13.17□□□□□ -0.3
SNRPD1-202ENST00000577906 C1QTNF2Q9BXJ5 285 aa13.17□□□□□ -0.3
SNRPD1-202ENST00000577906 AXIN1O15169 862 aa13.16□□□□□ -0.3
SNRPD1-202ENST00000577906 SMCPP49901 116 aaPredicted RBP13.16□□□□□ -0.3
SNRPD1-202ENST00000577906 ARID5BQ14865 1188 aa13.16□□□□□ -0.3
SNRPD1-202ENST00000577906 HPS1Q92902 700 aa13.16□□□□□ -0.3
SNRPD1-202ENST00000577906 ZBTB33Q86T24 672 aa13.15□□□□□ -0.3
SNRPD1-202ENST00000577906 GJD4Q96KN9 370 aaPredicted RBP13.15□□□□□ -0.3
SNRPD1-202ENST00000577906 CARD14Q9BXL6 1004 aa13.15□□□□□ -0.3
SNRPD1-202ENST00000577906 AAASQ9NRG9 546 aa13.15□□□□□ -0.3
SNRPD1-202ENST00000577906 TRMT44Q8IYL2 757 aaKnown RBP13.14□□□□□ -0.31
SNRPD1-202ENST00000577906 SNRKQ9NRH2 765 aa13.13□□□□□ -0.31
SNRPD1-202ENST00000577906 ST8SIA5O15466 376 aa13.12□□□□□ -0.31
SNRPD1-202ENST00000577906 ADH1CP00326 375 aa13.12□□□□□ -0.31
SNRPD1-202ENST00000577906 ERFEQ4G0M1 354 aa13.12□□□□□ -0.31
SNRPD1-202ENST00000577906 MTMR14Q8NCE2 650 aa13.12□□□□□ -0.31
SNRPD1-202ENST00000577906 MAP4K5Q9Y4K4 846 aa13.11□□□□□ -0.31
SNRPD1-202ENST00000577906 NR5A1Q13285 461 aa13.1□□□□□ -0.31
SNRPD1-202ENST00000577906 NNTQ13423 1086 aa13.1□□□□□ -0.31
SNRPD1-202ENST00000577906 TMEM132AQ24JP5 1023 aa13.1□□□□□ -0.31
SNRPD1-202ENST00000577906 VASH1Q7L8A9 365 aaPredicted RBP13.09□□□□□ -0.31
SNRPD1-202ENST00000577906 SLC10A4Q96EP9 437 aa13.09□□□□□ -0.31
SNRPD1-202ENST00000577906 CDV3Q9UKY7 258 aaKnown RBP13.09□□□□□ -0.31
SNRPD1-202ENST00000577906 NDUFB9Q9Y6M9 179 aa13.09□□□□□ -0.31
SNRPD1-202ENST00000577906 ADAM32Q8TC27 787 aa13.08□□□□□ -0.32
SNRPD1-202ENST00000577906 PRM3Q9NNZ6 103 aa13.08□□□□□ -0.32
SNRPD1-202ENST00000577906 GRM5P41594 1212 aa13.07□□□□□ -0.32
SNRPD1-202ENST00000577906 OCSTAMPQ9BR26 566 aa13.07□□□□□ -0.32
SNRPD1-202ENST00000577906 ZBBXA8MT70 800 aa13.05□□□□□ -0.32
SNRPD1-202ENST00000577906 CAPN5O15484 640 aaPredicted RBP13.04□□□□□ -0.32
SNRPD1-202ENST00000577906 FSHRP23945 695 aa13.03□□□□□ -0.32
SNRPD1-202ENST00000577906 ZNF787Q6DD87 383 aa13.03□□□□□ -0.32
SNRPD1-202ENST00000577906 DZIP3Q86Y13 1208 aaKnown RBP13.02□□□□□ -0.33
SNRPD1-202ENST00000577906 DACH1Q9UI36 760 aa13.02□□□□□ -0.33
SNRPD1-202ENST00000577906 WDR4P57081 412 aaKnown RBP13.01□□□□□ -0.33
SNRPD1-202ENST00000577906 KCTD15Q96SI1 283 aaPredicted RBP13.01□□□□□ -0.33
SNRPD1-202ENST00000577906 NR3C2P08235 984 aa13□□□□□ -0.33
SNRPD1-202ENST00000577906 NBPF20Q3BBV1 942 aa13□□□□□ -0.33
SNRPD1-202ENST00000577906 ATP13A2Q9NQ11 1180 aa13□□□□□ -0.33
SNRPD1-202ENST00000577906 FBXO45P0C2W1 286 aa12.99□□□□□ -0.33
SNRPD1-202ENST00000577906 KLF16Q9BXK1 252 aaPredicted RBP12.99□□□□□ -0.33
SNRPD1-202ENST00000577906 TIMP2P16035 220 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms