RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 COL22A1Q8NFW1 1626 aaPredicted RBP12.99□□□□□ -0.33
CDKN2A-211ENST00000577854 ATAD2Q6PL18 1390 aa12.98□□□□□ -0.33
CDKN2A-211ENST00000577854 POLR3AO14802 1390 aaPredicted RBP12.97□□□□□ -0.33
CDKN2A-211ENST00000577854 USP47Q96K76 1375 aa12.97□□□□□ -0.33
CDKN2A-211ENST00000577854 ZBTB7CA1YPR0 619 aa12.97□□□□□ -0.33
CDKN2A-211ENST00000577854 TRPC5Q9UL62 973 aaPredicted RBP12.97□□□□□ -0.33
CDKN2A-211ENST00000577854 TOPAZ1Q8N9V7 1692 aa12.96□□□□□ -0.34
CDKN2A-211ENST00000577854 RBM6P78332 1123 aaKnown RBP12.95□□□□□ -0.34
CDKN2A-211ENST00000577854 PRDM11Q9NQV5 511 aa12.95□□□□□ -0.34
CDKN2A-211ENST00000577854 SBNO2Q9Y2G9 1366 aa12.94□□□□□ -0.34
CDKN2A-211ENST00000577854 ZC3H6P61129 1189 aaKnown RBP12.94□□□□□ -0.34
CDKN2A-211ENST00000577854 HDGFL2Q7Z4V5 671 aaPredicted RBP12.94□□□□□ -0.34
CDKN2A-211ENST00000577854 FNBP4Q8N3X1 1017 aaPredicted RBP12.94□□□□□ -0.34
CDKN2A-211ENST00000577854 TRPM3Q9HCF6 1732 aaPredicted RBP12.93□□□□□ -0.34
CDKN2A-211ENST00000577854 A0A0G2JS52 829 aa12.93□□□□□ -0.34
CDKN2A-211ENST00000577854 SOX12O15370 315 aa12.93□□□□□ -0.34
CDKN2A-211ENST00000577854 SLC24A1O60721 1099 aa12.93□□□□□ -0.34
CDKN2A-211ENST00000577854 NLRP6P59044 892 aa12.93□□□□□ -0.34
CDKN2A-211ENST00000577854 TMF1P82094 1093 aa12.93□□□□□ -0.34
CDKN2A-211ENST00000577854 MYT1Q01538 1121 aa12.93□□□□□ -0.34
CDKN2A-211ENST00000577854 NLRP13Q86W25 1043 aa12.93□□□□□ -0.34
CDKN2A-211ENST00000577854 UNC5CLQ8IV45 518 aa12.93□□□□□ -0.34
CDKN2A-211ENST00000577854 POLR3GLQ9BT43 218 aa12.93□□□□□ -0.34
CDKN2A-211ENST00000577854 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
CDKN2A-211ENST00000577854 USP6P35125 1406 aa12.93□□□□□ -0.34
CDKN2A-211ENST00000577854 KTN1Q86UP2 1357 aaKnown RBP12.93□□□□□ -0.34
CDKN2A-211ENST00000577854 CHRNA2Q15822 529 aa12.92□□□□□ -0.34
CDKN2A-211ENST00000577854 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDKN2A-211ENST00000577854 BTG4Q9NY30 223 aa12.92□□□□□ -0.34
CDKN2A-211ENST00000577854 FAM83GA6ND36 823 aa12.91□□□□□ -0.34
CDKN2A-211ENST00000577854 SLC12A5Q9H2X9 1139 aa12.91□□□□□ -0.34
CDKN2A-211ENST00000577854 TERF2IPQ9NYB0 399 aa12.91□□□□□ -0.34
CDKN2A-211ENST00000577854 KIAA0232Q92628 1395 aa12.91□□□□□ -0.34
CDKN2A-211ENST00000577854 ALS2Q96Q42 1657 aa12.9□□□□□ -0.34
CDKN2A-211ENST00000577854 TESK2Q96S53 571 aa12.9□□□□□ -0.34
CDKN2A-211ENST00000577854 STRN4Q9NRL3 753 aa12.9□□□□□ -0.34
CDKN2A-211ENST00000577854 BCL9LQ86UU0 1499 aa12.9□□□□□ -0.34
CDKN2A-211ENST00000577854 TTC21BQ7Z4L5 1316 aa12.89□□□□□ -0.35
CDKN2A-211ENST00000577854 ATRNO75882 1429 aa12.89□□□□□ -0.35
CDKN2A-211ENST00000577854 CDCA8Q53HL2 280 aa12.89□□□□□ -0.35
CDKN2A-211ENST00000577854 GJD4Q96KN9 370 aaPredicted RBP12.89□□□□□ -0.35
CDKN2A-211ENST00000577854 BRD4O60885 1362 aaPredicted RBP12.89□□□□□ -0.35
CDKN2A-211ENST00000577854 GCP02774 474 aa12.88□□□□□ -0.35
CDKN2A-211ENST00000577854 EVA1CP58658 441 aa12.88□□□□□ -0.35
CDKN2A-211ENST00000577854 ABCA3Q99758 1704 aa12.88□□□□□ -0.35
CDKN2A-211ENST00000577854 MARF1Q9Y4F3 1742 aaKnown RBP12.88□□□□□ -0.35
CDKN2A-211ENST00000577854 SLIT2O94813 1529 aa12.88□□□□□ -0.35
CDKN2A-211ENST00000577854 RGS12O14924 1447 aa12.88□□□□□ -0.35
CDKN2A-211ENST00000577854 EIF4G2P78344 907 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDKN2A-211ENST00000577854 TTC21AQ8NDW8 1320 aa12.87□□□□□ -0.35
CDKN2A-211ENST00000577854 VPS72Q15906 364 aa12.86□□□□□ -0.35
CDKN2A-211ENST00000577854 USP35Q9P2H5 1018 aa12.86□□□□□ -0.35
CDKN2A-211ENST00000577854 USP19O94966 1318 aa12.86□□□□□ -0.35
CDKN2A-211ENST00000577854 CDK12Q9NYV4 1490 aaPredicted RBP12.85□□□□□ -0.35
CDKN2A-211ENST00000577854 A0A1W2PP64 1363 aa12.85□□□□□ -0.35
CDKN2A-211ENST00000577854 NINLQ9Y2I6 1382 aa12.85□□□□□ -0.35
CDKN2A-211ENST00000577854 HSPA5P11021 654 aaKnown RBP12.85□□□□□ -0.35
CDKN2A-211ENST00000577854 NME9Q86XW9 330 aa12.85□□□□□ -0.35
CDKN2A-211ENST00000577854 PUS7Q96PZ0 661 aaKnown RBP12.85□□□□□ -0.35
CDKN2A-211ENST00000577854 PLCH1Q4KWH8 1693 aa12.85□□□□□ -0.35
CDKN2A-211ENST00000577854 CPSF1Q10570 1443 aaKnown RBP12.85□□□□□ -0.35
CDKN2A-211ENST00000577854 FAM98CQ17RN3 349 aaKnown RBP12.84□□□□□ -0.35
CDKN2A-211ENST00000577854 PHRF1Q9P1Y6 1649 aaKnown RBP12.84□□□□□ -0.35
CDKN2A-211ENST00000577854 COL14A1Q05707 1796 aaKnown RBP12.84□□□□□ -0.35
CDKN2A-211ENST00000577854 NRKQ7Z2Y5 1582 aa12.83□□□□□ -0.36
CDKN2A-211ENST00000577854 EDC4Q6P2E9 1401 aaKnown RBP12.83□□□□□ -0.36
CDKN2A-211ENST00000577854 KCNH5Q8NCM2 988 aa12.83□□□□□ -0.36
CDKN2A-211ENST00000577854 ZRANB1Q9UGI0 708 aa12.83□□□□□ -0.36
CDKN2A-211ENST00000577854 SSH2Q76I76 1423 aa12.82□□□□□ -0.36
CDKN2A-211ENST00000577854 CSB-PGBD3P0DP91 1061 aa12.82□□□□□ -0.36
CDKN2A-211ENST00000577854 SEPT12Q8IYM1 358 aa12.82□□□□□ -0.36
CDKN2A-211ENST00000577854 PIK3C2AO00443 1686 aa12.81□□□□□ -0.36
CDKN2A-211ENST00000577854 CD163L1Q9NR16 1453 aa12.81□□□□□ -0.36
CDKN2A-211ENST00000577854 COG3Q96JB2 828 aa12.81□□□□□ -0.36
CDKN2A-211ENST00000577854 AKAP12Q02952 1782 aa12.81□□□□□ -0.36
CDKN2A-211ENST00000577854 CPDO75976 1380 aa12.81□□□□□ -0.36
CDKN2A-211ENST00000577854 ANKRD36BQ8N2N9 1353 aa12.81□□□□□ -0.36
CDKN2A-211ENST00000577854 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.8□□□□□ -0.36
CDKN2A-211ENST00000577854 NWD2Q9ULI1 1742 aa12.8□□□□□ -0.36
CDKN2A-211ENST00000577854 CRYBG1Q9Y4K1 1723 aa12.8□□□□□ -0.36
CDKN2A-211ENST00000577854 GLI3P10071 1580 aa12.79□□□□□ -0.36
CDKN2A-211ENST00000577854 LARP1Q6PKG0 1096 aaKnown RBP12.79□□□□□ -0.36
CDKN2A-211ENST00000577854 SPATA31A5Q5VU36 1347 aa12.79□□□□□ -0.36
CDKN2A-211ENST00000577854 SPATA31A7Q8IWB4 1347 aa12.79□□□□□ -0.36
CDKN2A-211ENST00000577854 TOM1L2Q6ZVM7 507 aa12.78□□□□□ -0.36
CDKN2A-211ENST00000577854 UPF1Q92900 1129 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDKN2A-211ENST00000577854 MON2Q7Z3U7 1717 aa12.78□□□□□ -0.36
CDKN2A-211ENST00000577854 SLIT3O75094 1523 aa12.78□□□□□ -0.36
CDKN2A-211ENST00000577854 KRT27Q7Z3Y8 459 aa12.77□□□□□ -0.37
CDKN2A-211ENST00000577854 GGNBP2Q9H3C7 697 aa12.77□□□□□ -0.37
CDKN2A-211ENST00000577854 SPATA31A1Q5TZJ5 1347 aa12.77□□□□□ -0.37
CDKN2A-211ENST00000577854 AATKQ6ZMQ8 1374 aa12.77□□□□□ -0.37
CDKN2A-211ENST00000577854 NRAPQ86VF7 1730 aa12.76□□□□□ -0.37
CDKN2A-211ENST00000577854 ARHGEF25Q86VW2 580 aa12.76□□□□□ -0.37
CDKN2A-211ENST00000577854 TCP11L2Q8N4U5 519 aa12.76□□□□□ -0.37
CDKN2A-211ENST00000577854 USP31Q70CQ4 1352 aa12.76□□□□□ -0.37
CDKN2A-211ENST00000577854 CAMTA1Q9Y6Y1 1673 aa12.76□□□□□ -0.37
CDKN2A-211ENST00000577854 COL5A2P05997 1499 aaPredicted RBP12.75□□□□□ -0.37
CDKN2A-211ENST00000577854 SF3B2Q13435 895 aaKnown RBP12.75□□□□□ -0.37
CDKN2A-211ENST00000577854 NSD3Q9BZ95 1437 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms