RNA–Protein interactions for RNA: ENST00000576553.1

POLR2A-206, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-206ENST00000576553 TRPC5Q9UL62 973 aaPredicted RBP29.52■■■□□ 2.32
POLR2A-206ENST00000576553 TIMELESSQ9UNS1 1208 aa29.51■■■□□ 2.31
POLR2A-206ENST00000576553 SBNO2Q9Y2G9 1366 aa29.51■■■□□ 2.31
POLR2A-206ENST00000576553 CDK12Q9NYV4 1490 aaPredicted RBP29.5■■■□□ 2.31
POLR2A-206ENST00000576553 ABCA3Q99758 1704 aa29.48■■■□□ 2.31
POLR2A-206ENST00000576553 CABP1Q9NZU7 370 aa29.47■■■□□ 2.31
POLR2A-206ENST00000576553 BCL9LQ86UU0 1499 aa29.45■■■□□ 2.31
POLR2A-206ENST00000576553 BRD4O60885 1362 aaPredicted RBP29.45■■■□□ 2.31
POLR2A-206ENST00000576553 ATRNO75882 1429 aa29.45■■■□□ 2.3
POLR2A-206ENST00000576553 ATAD2Q6PL18 1390 aa29.44■■■□□ 2.3
POLR2A-206ENST00000576553 SLIT2O94813 1529 aa29.44■■■□□ 2.3
POLR2A-206ENST00000576553 UNC5CLQ8IV45 518 aa29.42■■■□□ 2.3
POLR2A-206ENST00000576553 CCER1Q8TC90 406 aaPredicted RBP29.41■■■□□ 2.3
POLR2A-206ENST00000576553 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.4■■■□□ 2.3
POLR2A-206ENST00000576553 ABTB2Q8N961 1025 aa29.39■■■□□ 2.3
POLR2A-206ENST00000576553 USP6P35125 1406 aa29.38■■■□□ 2.29
POLR2A-206ENST00000576553 SLC24A1O60721 1099 aa29.37■■■□□ 2.29
POLR2A-206ENST00000576553 ZNF692Q9BU19 519 aaPredicted RBP29.37■■■□□ 2.29
POLR2A-206ENST00000576553 CRYBG1Q9Y4K1 1723 aa29.37■■■□□ 2.29
POLR2A-206ENST00000576553 RGS12O14924 1447 aa29.37■■■□□ 2.29
POLR2A-206ENST00000576553 FAM83GA6ND36 823 aa29.36■■■□□ 2.29
POLR2A-206ENST00000576553 NUTM2GQ5VZR2 741 aa29.36■■■□□ 2.29
POLR2A-206ENST00000576553 NWD2Q9ULI1 1742 aa29.36■■■□□ 2.29
POLR2A-206ENST00000576553 PLCH1Q4KWH8 1693 aa29.35■■■□□ 2.29
POLR2A-206ENST00000576553 GJD4Q96KN9 370 aaPredicted RBP29.35■■■□□ 2.29
POLR2A-206ENST00000576553 NLRP13Q86W25 1043 aa29.34■■■□□ 2.29
POLR2A-206ENST00000576553 ST20-MTHFSA0A0A6YYL1 179 aa29.33■■■□□ 2.29
POLR2A-206ENST00000576553 PRDM11Q9NQV5 511 aa29.33■■■□□ 2.29
POLR2A-206ENST00000576553 COL14A1Q05707 1796 aaKnown RBP29.32■■■□□ 2.28
POLR2A-206ENST00000576553 PUS7Q96PZ0 661 aaKnown RBP29.32■■■□□ 2.28
POLR2A-206ENST00000576553 PHRF1Q9P1Y6 1649 aaKnown RBP29.31■■■□□ 2.28
POLR2A-206ENST00000576553 VPS72Q15906 364 aa29.31■■■□□ 2.28
POLR2A-206ENST00000576553 USP47Q96K76 1375 aa29.29■■■□□ 2.28
POLR2A-206ENST00000576553 USP19O94966 1318 aa29.29■■■□□ 2.28
POLR2A-206ENST00000576553 TESK2Q96S53 571 aa29.29■■■□□ 2.28
POLR2A-206ENST00000576553 BTG4Q9NY30 223 aa29.29■■■□□ 2.28
POLR2A-206ENST00000576553 SSH2Q76I76 1423 aa29.28■■■□□ 2.28
POLR2A-206ENST00000576553 CPSF1Q10570 1443 aaKnown RBP29.28■■■□□ 2.28
POLR2A-206ENST00000576553 KIAA0232Q92628 1395 aa29.27■■■□□ 2.28
POLR2A-206ENST00000576553 TMC1Q8TDI8 760 aa29.27■■■□□ 2.28
POLR2A-206ENST00000576553 CCDC9Q9Y3X0 531 aaKnown RBP29.27■■■□□ 2.28
POLR2A-206ENST00000576553 KTN1Q86UP2 1357 aaKnown RBP29.26■■■□□ 2.28
POLR2A-206ENST00000576553 AKAP12Q02952 1782 aa29.26■■■□□ 2.28
POLR2A-206ENST00000576553 NLRP6P59044 892 aa29.26■■■□□ 2.27
POLR2A-206ENST00000576553 ZC3H6P61129 1189 aaKnown RBP29.26■■■□□ 2.27
POLR2A-206ENST00000576553 TTC21AQ8NDW8 1320 aa29.25■■■□□ 2.27
POLR2A-206ENST00000576553 TTC21BQ7Z4L5 1316 aa29.24■■■□□ 2.27
POLR2A-206ENST00000576553 NRKQ7Z2Y5 1582 aa29.24■■■□□ 2.27
POLR2A-206ENST00000576553 GLI3P10071 1580 aa29.23■■■□□ 2.27
POLR2A-206ENST00000576553 GCP02774 474 aa29.23■■■□□ 2.27
POLR2A-206ENST00000576553 HDGFL2Q7Z4V5 671 aaPredicted RBP29.23■■■□□ 2.27
POLR2A-206ENST00000576553 NRAPQ86VF7 1730 aa29.23■■■□□ 2.27
POLR2A-206ENST00000576553 CPDO75976 1380 aa29.22■■■□□ 2.27
POLR2A-206ENST00000576553 TMF1P82094 1093 aa29.21■■■□□ 2.27
POLR2A-206ENST00000576553 CHRNA2Q15822 529 aa29.21■■■□□ 2.27
POLR2A-206ENST00000576553 TERF2IPQ9NYB0 399 aa29.21■■■□□ 2.27
POLR2A-206ENST00000576553 NINLQ9Y2I6 1382 aa29.21■■■□□ 2.27
POLR2A-206ENST00000576553 UPF1Q92900 1129 aaKnown RBP eCLIP29.2■■■□□ 2.26
POLR2A-206ENST00000576553 SLC12A5Q9H2X9 1139 aa29.2■■■□□ 2.26
POLR2A-206ENST00000576553 PIK3C2AO00443 1686 aa29.19■■■□□ 2.26
POLR2A-206ENST00000576553 MON2Q7Z3U7 1717 aa29.18■■■□□ 2.26
POLR2A-206ENST00000576553 SLIT3O75094 1523 aa29.17■■■□□ 2.26
POLR2A-206ENST00000576553 CD163L1Q9NR16 1453 aa29.17■■■□□ 2.26
POLR2A-206ENST00000576553 CDCA8Q53HL2 280 aa29.15■■■□□ 2.26
POLR2A-206ENST00000576553 ONECUT3O60422 494 aaPredicted RBP29.14■■■□□ 2.26
POLR2A-206ENST00000576553 KCNH5Q8NCM2 988 aa29.14■■■□□ 2.26
POLR2A-206ENST00000576553 SPATA31A5Q5VU36 1347 aa29.14■■■□□ 2.25
POLR2A-206ENST00000576553 SPATA31A7Q8IWB4 1347 aa29.14■■■□□ 2.25
POLR2A-206ENST00000576553 EVA1CP58658 441 aa29.13■■■□□ 2.25
POLR2A-206ENST00000576553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.13■■■□□ 2.25
POLR2A-206ENST00000576553 SEPT12Q8IYM1 358 aa29.13■■■□□ 2.25
POLR2A-206ENST00000576553 STRN4Q9NRL3 753 aa29.13■■■□□ 2.25
POLR2A-206ENST00000576553 EDC4Q6P2E9 1401 aaKnown RBP29.12■■■□□ 2.25
POLR2A-206ENST00000576553 A0A1W2PP64 1363 aa29.12■■■□□ 2.25
POLR2A-206ENST00000576553 A0A0G2JS52 829 aa29.1■■■□□ 2.25
POLR2A-206ENST00000576553 MYT1Q01538 1121 aa29.1■■■□□ 2.25
POLR2A-206ENST00000576553 ZBTB7CA1YPR0 619 aa29.09■■■□□ 2.25
POLR2A-206ENST00000576553 FAM98CQ17RN3 349 aaKnown RBP29.09■■■□□ 2.25
POLR2A-206ENST00000576553 LMO7Q8WWI1 1683 aa29.09■■■□□ 2.25
POLR2A-206ENST00000576553 AATKQ6ZMQ8 1374 aa29.08■■■□□ 2.25
POLR2A-206ENST00000576553 USP31Q70CQ4 1352 aa29.08■■■□□ 2.25
POLR2A-206ENST00000576553 CAMTA1Q9Y6Y1 1673 aa29.08■■■□□ 2.25
POLR2A-206ENST00000576553 SPATA31A1Q5TZJ5 1347 aa29.07■■■□□ 2.24
POLR2A-206ENST00000576553 NME9Q86XW9 330 aa29.06■■■□□ 2.24
POLR2A-206ENST00000576553 ANKRD36BQ8N2N9 1353 aa29.04■■■□□ 2.24
POLR2A-206ENST00000576553 SOX12O15370 315 aa29.04■■■□□ 2.24
POLR2A-206ENST00000576553 EIF4G2P78344 907 aaKnown RBP eCLIP29.03■■■□□ 2.24
POLR2A-206ENST00000576553 KRT27Q7Z3Y8 459 aa29.03■■■□□ 2.24
POLR2A-206ENST00000576553 ARHGEF25Q86VW2 580 aa29.03■■■□□ 2.24
POLR2A-206ENST00000576553 USP54Q70EL1 1684 aa29.02■■■□□ 2.24
POLR2A-206ENST00000576553 COL5A2P05997 1499 aaPredicted RBP29.02■■■□□ 2.24
POLR2A-206ENST00000576553 BRWD3Q6RI45 1802 aa29.01■■■□□ 2.24
POLR2A-206ENST00000576553 LARP1Q6PKG0 1096 aaKnown RBP29.01■■■□□ 2.23
POLR2A-206ENST00000576553 ZRANB1Q9UGI0 708 aa29.01■■■□□ 2.23
POLR2A-206ENST00000576553 NFAT5O94916 1531 aa28.99■■■□□ 2.23
POLR2A-206ENST00000576553 CCDC125Q86Z20 511 aa28.99■■■□□ 2.23
POLR2A-206ENST00000576553 USP35Q9P2H5 1018 aa28.99■■■□□ 2.23
POLR2A-206ENST00000576553 BARGINQ6ZT62 677 aa28.97■■■□□ 2.23
POLR2A-206ENST00000576553 TCP11L2Q8N4U5 519 aa28.97■■■□□ 2.23
POLR2A-206ENST00000576553 THRAP3Q9Y2W1 955 aaKnown RBP28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms