RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 ST20-MTHFSA0A0A6YYL1 179 aa33.13■■■□□ 2.89
SNF8-217ENST00000576353 USP21Q9UK80 565 aa33.11■■■□□ 2.89
SNF8-217ENST00000576353 BRD4O60885 1362 aaPredicted RBP33.09■■■□□ 2.89
SNF8-217ENST00000576353 QTRT2Q9H974 415 aaKnown RBP33.09■■■□□ 2.89
SNF8-217ENST00000576353 RXRBP28702 533 aa33.08■■■□□ 2.89
SNF8-217ENST00000576353 USP47Q96K76 1375 aa33.08■■■□□ 2.89
SNF8-217ENST00000576353 ALS2Q96Q42 1657 aa33.07■■■□□ 2.89
SNF8-217ENST00000576353 PUS7Q96PZ0 661 aaKnown RBP33.07■■■□□ 2.88
SNF8-217ENST00000576353 TESK2Q96S53 571 aa33.07■■■□□ 2.88
SNF8-217ENST00000576353 ZNF692Q9BU19 519 aaPredicted RBP33.07■■■□□ 2.88
SNF8-217ENST00000576353 ABTB2Q8N961 1025 aa33.05■■■□□ 2.88
SNF8-217ENST00000576353 TRPC5Q9UL62 973 aaPredicted RBP33.03■■■□□ 2.88
SNF8-217ENST00000576353 USP6P35125 1406 aa33.02■■■□□ 2.88
SNF8-217ENST00000576353 RBM6P78332 1123 aaKnown RBP33.01■■■□□ 2.87
SNF8-217ENST00000576353 NUTM2GQ5VZR2 741 aa33.01■■■□□ 2.87
SNF8-217ENST00000576353 MARF1Q9Y4F3 1742 aaKnown RBP32.99■■■□□ 2.87
SNF8-217ENST00000576353 NLRP13Q86W25 1043 aa32.98■■■□□ 2.87
SNF8-217ENST00000576353 TMC1Q8TDI8 760 aa32.98■■■□□ 2.87
SNF8-217ENST00000576353 BCL9LQ86UU0 1499 aa32.98■■■□□ 2.87
SNF8-217ENST00000576353 UNC5CLQ8IV45 518 aa32.97■■■□□ 2.87
SNF8-217ENST00000576353 FAM83GA6ND36 823 aa32.96■■■□□ 2.87
SNF8-217ENST00000576353 TMF1P82094 1093 aa32.96■■■□□ 2.87
SNF8-217ENST00000576353 SLIT2O94813 1529 aa32.96■■■□□ 2.87
SNF8-217ENST00000576353 CPSF1Q10570 1443 aaKnown RBP32.95■■■□□ 2.87
SNF8-217ENST00000576353 ABCA3Q99758 1704 aa32.94■■■□□ 2.86
SNF8-217ENST00000576353 ATRNO75882 1429 aa32.94■■■□□ 2.86
SNF8-217ENST00000576353 SSH2Q76I76 1423 aa32.94■■■□□ 2.86
SNF8-217ENST00000576353 SLC12A5Q9H2X9 1139 aa32.93■■■□□ 2.86
SNF8-217ENST00000576353 KTN1Q86UP2 1357 aaKnown RBP32.93■■■□□ 2.86
SNF8-217ENST00000576353 HDGFL2Q7Z4V5 671 aaPredicted RBP32.92■■■□□ 2.86
SNF8-217ENST00000576353 CDK12Q9NYV4 1490 aaPredicted RBP32.92■■■□□ 2.86
SNF8-217ENST00000576353 TERF2IPQ9NYB0 399 aa32.91■■■□□ 2.86
SNF8-217ENST00000576353 TTC21BQ7Z4L5 1316 aa32.91■■■□□ 2.86
SNF8-217ENST00000576353 NLRP6P59044 892 aa32.9■■■□□ 2.86
SNF8-217ENST00000576353 CDCA8Q53HL2 280 aa32.9■■■□□ 2.86
SNF8-217ENST00000576353 PRDM11Q9NQV5 511 aa32.9■■■□□ 2.86
SNF8-217ENST00000576353 USP19O94966 1318 aa32.9■■■□□ 2.86
SNF8-217ENST00000576353 TTC21AQ8NDW8 1320 aa32.9■■■□□ 2.86
SNF8-217ENST00000576353 NINLQ9Y2I6 1382 aa32.89■■■□□ 2.86
SNF8-217ENST00000576353 GJD4Q96KN9 370 aaPredicted RBP32.87■■■□□ 2.85
SNF8-217ENST00000576353 GCP02774 474 aa32.86■■■□□ 2.85
SNF8-217ENST00000576353 ZC3H6P61129 1189 aaKnown RBP32.86■■■□□ 2.85
SNF8-217ENST00000576353 BTG4Q9NY30 223 aa32.86■■■□□ 2.85
SNF8-217ENST00000576353 CRYBG1Q9Y4K1 1723 aa32.85■■■□□ 2.85
SNF8-217ENST00000576353 KIAA0232Q92628 1395 aa32.85■■■□□ 2.85
SNF8-217ENST00000576353 EIF4G2P78344 907 aaKnown RBP eCLIP32.84■■■□□ 2.85
SNF8-217ENST00000576353 VPS72Q15906 364 aa32.84■■■□□ 2.85
SNF8-217ENST00000576353 CD163L1Q9NR16 1453 aa32.83■■■□□ 2.85
SNF8-217ENST00000576353 AKAP12Q02952 1782 aa32.83■■■□□ 2.85
SNF8-217ENST00000576353 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.81■■■□□ 2.84
SNF8-217ENST00000576353 COL14A1Q05707 1796 aaKnown RBP32.81■■■□□ 2.84
SNF8-217ENST00000576353 PHRF1Q9P1Y6 1649 aaKnown RBP32.8■■■□□ 2.84
SNF8-217ENST00000576353 NWD2Q9ULI1 1742 aa32.8■■■□□ 2.84
SNF8-217ENST00000576353 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.8■■■□□ 2.84
SNF8-217ENST00000576353 CCDC9Q9Y3X0 531 aaKnown RBP32.8■■■□□ 2.84
SNF8-217ENST00000576353 CPDO75976 1380 aa32.8■■■□□ 2.84
SNF8-217ENST00000576353 RGS12O14924 1447 aa32.79■■■□□ 2.84
SNF8-217ENST00000576353 CHRNA2Q15822 529 aa32.79■■■□□ 2.84
SNF8-217ENST00000576353 A0A1W2PP64 1363 aa32.79■■■□□ 2.84
SNF8-217ENST00000576353 PLCH1Q4KWH8 1693 aa32.78■■■□□ 2.84
SNF8-217ENST00000576353 EDC4Q6P2E9 1401 aaKnown RBP32.77■■■□□ 2.84
SNF8-217ENST00000576353 KCNH5Q8NCM2 988 aa32.76■■■□□ 2.83
SNF8-217ENST00000576353 NRKQ7Z2Y5 1582 aa32.75■■■□□ 2.83
SNF8-217ENST00000576353 HSPA5P11021 654 aaKnown RBP32.75■■■□□ 2.83
SNF8-217ENST00000576353 PIK3C2AO00443 1686 aa32.75■■■□□ 2.83
SNF8-217ENST00000576353 MON2Q7Z3U7 1717 aa32.74■■■□□ 2.83
SNF8-217ENST00000576353 SLIT3O75094 1523 aa32.73■■■□□ 2.83
SNF8-217ENST00000576353 NME9Q86XW9 330 aa32.72■■■□□ 2.83
SNF8-217ENST00000576353 USP31Q70CQ4 1352 aa32.71■■■□□ 2.83
SNF8-217ENST00000576353 ANKRD36BQ8N2N9 1353 aa32.71■■■□□ 2.83
SNF8-217ENST00000576353 EVA1CP58658 441 aa32.7■■■□□ 2.83
SNF8-217ENST00000576353 ZBTB7CA1YPR0 619 aa32.68■■■□□ 2.82
SNF8-217ENST00000576353 STRN4Q9NRL3 753 aa32.68■■■□□ 2.82
SNF8-217ENST00000576353 GLI3P10071 1580 aa32.67■■■□□ 2.82
SNF8-217ENST00000576353 ONECUT3O60422 494 aaPredicted RBP32.67■■■□□ 2.82
SNF8-217ENST00000576353 ZRANB1Q9UGI0 708 aa32.67■■■□□ 2.82
SNF8-217ENST00000576353 NRAPQ86VF7 1730 aa32.66■■■□□ 2.82
SNF8-217ENST00000576353 SPATA31A5Q5VU36 1347 aa32.66■■■□□ 2.82
SNF8-217ENST00000576353 SPATA31A7Q8IWB4 1347 aa32.66■■■□□ 2.82
SNF8-217ENST00000576353 AATKQ6ZMQ8 1374 aa32.66■■■□□ 2.82
SNF8-217ENST00000576353 SOX12O15370 315 aa32.65■■■□□ 2.82
SNF8-217ENST00000576353 ARHGEF25Q86VW2 580 aa32.64■■■□□ 2.82
SNF8-217ENST00000576353 SEPT12Q8IYM1 358 aa32.63■■■□□ 2.81
SNF8-217ENST00000576353 CAMTA1Q9Y6Y1 1673 aa32.62■■■□□ 2.81
SNF8-217ENST00000576353 FAM98CQ17RN3 349 aaKnown RBP32.6■■■□□ 2.81
SNF8-217ENST00000576353 POLR3GLQ9BT43 218 aa32.6■■■□□ 2.81
SNF8-217ENST00000576353 SPATA31A1Q5TZJ5 1347 aa32.59■■■□□ 2.81
SNF8-217ENST00000576353 UPF1Q92900 1129 aaKnown RBP eCLIP32.58■■■□□ 2.81
SNF8-217ENST00000576353 COG3Q96JB2 828 aa32.58■■■□□ 2.81
SNF8-217ENST00000576353 LMO7Q8WWI1 1683 aa32.58■■■□□ 2.81
SNF8-217ENST00000576353 A0A0G2JS52 829 aa32.57■■■□□ 2.8
SNF8-217ENST00000576353 MYT1Q01538 1121 aa32.57■■■□□ 2.8
SNF8-217ENST00000576353 LARP1Q6PKG0 1096 aaKnown RBP32.57■■■□□ 2.8
SNF8-217ENST00000576353 OVOS2A0A0J9YW53 1432 aa32.56■■■□□ 2.8
SNF8-217ENST00000576353 OVOS2Q6IE36 1432 aa32.56■■■□□ 2.8
SNF8-217ENST00000576353 NFAT5O94916 1531 aa32.56■■■□□ 2.8
SNF8-217ENST00000576353 USP54Q70EL1 1684 aa32.55■■■□□ 2.8
SNF8-217ENST00000576353 COL5A2P05997 1499 aaPredicted RBP32.54■■■□□ 2.8
SNF8-217ENST00000576353 AXIN2Q9Y2T1 843 aa32.54■■■□□ 2.8
SNF8-217ENST00000576353 FYB1O15117 783 aa32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms