RNA–Protein interactions for RNA: ENST00000576106.5

TRAP1-215, Transcript of TNF receptor associated protein 1, human

TSL 4

Gene TRAP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAP1-215	ENST00000576106	BCL9L	Q86UU0	1499 aa		32.37	■■■□□ 2.77
TRAP1-215	ENST00000576106	TIMELESS	Q9UNS1	1208 aa		32.37	■■■□□ 2.77
TRAP1-215	ENST00000576106	TOPAZ1	Q8N9V7	1692 aa		32.37	■■■□□ 2.77
TRAP1-215	ENST00000576106	SBNO2	Q9Y2G9	1366 aa		32.36	■■■□□ 2.77
TRAP1-215	ENST00000576106	ATRN	O75882	1429 aa		32.35	■■■□□ 2.77
TRAP1-215	ENST00000576106	UNC5CL	Q8IV45	518 aa		32.35	■■■□□ 2.77
TRAP1-215	ENST00000576106	SLIT2	O94813	1529 aa		32.32	■■■□□ 2.76
TRAP1-215	ENST00000576106	ALS2	Q96Q42	1657 aa		32.31	■■■□□ 2.76
TRAP1-215	ENST00000576106	BRD4	O60885	1362 aa	Predicted RBP	32.31	■■■□□ 2.76
TRAP1-215	ENST00000576106	ATAD2	Q6PL18	1390 aa		32.31	■■■□□ 2.76
TRAP1-215	ENST00000576106	ABTB2	Q8N961	1025 aa		32.3	■■■□□ 2.76
TRAP1-215	ENST00000576106	FAM83G	A6ND36	823 aa		32.29	■■■□□ 2.76
TRAP1-215	ENST00000576106	MARF1	Q9Y4F3	1742 aa	Known RBP	32.29	■■■□□ 2.76
TRAP1-215	ENST00000576106	NUTM2G	Q5VZR2	741 aa		32.28	■■■□□ 2.76
TRAP1-215	ENST00000576106	CCER1	Q8TC90	406 aa	Predicted RBP	32.27	■■■□□ 2.76
TRAP1-215	ENST00000576106	GJD4	Q96KN9	370 aa	Predicted RBP	32.27	■■■□□ 2.76
TRAP1-215	ENST00000576106	RGS12	O14924	1447 aa		32.26	■■■□□ 2.76
TRAP1-215	ENST00000576106	ZNF692	Q9BU19	519 aa	Predicted RBP	32.25	■■■□□ 2.75
TRAP1-215	ENST00000576106	USP6	P35125	1406 aa		32.24	■■■□□ 2.75
TRAP1-215	ENST00000576106	SLC24A1	O60721	1099 aa		32.23	■■■□□ 2.75
TRAP1-215	ENST00000576106	NLRP13	Q86W25	1043 aa		32.23	■■■□□ 2.75
TRAP1-215	ENST00000576106	PRDM11	Q9NQV5	511 aa		32.23	■■■□□ 2.75
TRAP1-215	ENST00000576106	ABCA3	Q99758	1704 aa		32.22	■■■□□ 2.75
TRAP1-215	ENST00000576106	ST20-MTHFS	A0A0A6YYL1	179 aa		32.21	■■■□□ 2.75
TRAP1-215	ENST00000576106	VPS72	Q15906	364 aa		32.21	■■■□□ 2.75
TRAP1-215	ENST00000576106	BTG4	Q9NY30	223 aa		32.2	■■■□□ 2.75
TRAP1-215	ENST00000576106	PUS7	Q96PZ0	661 aa	Known RBP	32.19	■■■□□ 2.74
TRAP1-215	ENST00000576106	CCDC9	Q9Y3X0	531 aa	Known RBP	32.18	■■■□□ 2.74
TRAP1-215	ENST00000576106	TESK2	Q96S53	571 aa		32.17	■■■□□ 2.74
TRAP1-215	ENST00000576106	USP19	O94966	1318 aa		32.17	■■■□□ 2.74
TRAP1-215	ENST00000576106	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.16	■■■□□ 2.74
TRAP1-215	ENST00000576106	KIAA0232	Q92628	1395 aa		32.16	■■■□□ 2.74
TRAP1-215	ENST00000576106	ZC3H6	P61129	1189 aa	Known RBP	32.15	■■■□□ 2.74
TRAP1-215	ENST00000576106	SSH2	Q76I76	1423 aa		32.15	■■■□□ 2.74
TRAP1-215	ENST00000576106	NLRP6	P59044	892 aa		32.14	■■■□□ 2.74
TRAP1-215	ENST00000576106	TMC1	Q8TDI8	760 aa		32.14	■■■□□ 2.74
TRAP1-215	ENST00000576106	CPSF1	Q10570	1443 aa	Known RBP	32.13	■■■□□ 2.73
TRAP1-215	ENST00000576106	TTC21B	Q7Z4L5	1316 aa		32.13	■■■□□ 2.73
TRAP1-215	ENST00000576106	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.13	■■■□□ 2.73
TRAP1-215	ENST00000576106	USP47	Q96K76	1375 aa		32.13	■■■□□ 2.73
TRAP1-215	ENST00000576106	GC	P02774	474 aa		32.12	■■■□□ 2.73
TRAP1-215	ENST00000576106	NWD2	Q9ULI1	1742 aa		32.12	■■■□□ 2.73
TRAP1-215	ENST00000576106	KTN1	Q86UP2	1357 aa	Known RBP	32.11	■■■□□ 2.73
TRAP1-215	ENST00000576106	TTC21A	Q8NDW8	1320 aa		32.11	■■■□□ 2.73
TRAP1-215	ENST00000576106	COL14A1	Q05707	1796 aa	Known RBP	32.11	■■■□□ 2.73
TRAP1-215	ENST00000576106	CRYBG1	Q9Y4K1	1723 aa		32.11	■■■□□ 2.73
TRAP1-215	ENST00000576106	CHRNA2	Q15822	529 aa		32.1	■■■□□ 2.73
TRAP1-215	ENST00000576106	PLCH1	Q4KWH8	1693 aa		32.1	■■■□□ 2.73
TRAP1-215	ENST00000576106	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.09	■■■□□ 2.73
TRAP1-215	ENST00000576106	CPD	O75976	1380 aa		32.08	■■■□□ 2.73
TRAP1-215	ENST00000576106	SLC12A5	Q9H2X9	1139 aa		32.08	■■■□□ 2.73
TRAP1-215	ENST00000576106	TERF2IP	Q9NYB0	399 aa		32.07	■■■□□ 2.72
TRAP1-215	ENST00000576106	TMF1	P82094	1093 aa		32.06	■■■□□ 2.72
TRAP1-215	ENST00000576106	GLI3	P10071	1580 aa		32.06	■■■□□ 2.72
TRAP1-215	ENST00000576106	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.05	■■■□□ 2.72
TRAP1-215	ENST00000576106	ONECUT3	O60422	494 aa	Predicted RBP	32.04	■■■□□ 2.72
TRAP1-215	ENST00000576106	SEPT12	Q8IYM1	358 aa		32.03	■■■□□ 2.72
TRAP1-215	ENST00000576106	NINL	Q9Y2I6	1382 aa		32.03	■■■□□ 2.72
TRAP1-215	ENST00000576106	NRK	Q7Z2Y5	1582 aa		32.02	■■■□□ 2.72
TRAP1-215	ENST00000576106	SPATA31A5	Q5VU36	1347 aa		32.01	■■■□□ 2.72
TRAP1-215	ENST00000576106	SPATA31A7	Q8IWB4	1347 aa		32.01	■■■□□ 2.72
TRAP1-215	ENST00000576106	EVA1C	P58658	441 aa		32.01	■■■□□ 2.71
TRAP1-215	ENST00000576106	STRN4	Q9NRL3	753 aa		32.01	■■■□□ 2.71
TRAP1-215	ENST00000576106	CD163L1	Q9NR16	1453 aa		32	■■■□□ 2.71
TRAP1-215	ENST00000576106	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32	■■■□□ 2.71
TRAP1-215	ENST00000576106	KCNH5	Q8NCM2	988 aa		32	■■■□□ 2.71
TRAP1-215	ENST00000576106	CDCA8	Q53HL2	280 aa		31.99	■■■□□ 2.71
TRAP1-215	ENST00000576106	NRAP	Q86VF7	1730 aa		31.99	■■■□□ 2.71
TRAP1-215	ENST00000576106		A0A0G2JS52	829 aa		31.98	■■■□□ 2.71
TRAP1-215	ENST00000576106	MYT1	Q01538	1121 aa		31.98	■■■□□ 2.71
TRAP1-215	ENST00000576106	FAM98C	Q17RN3	349 aa	Known RBP	31.98	■■■□□ 2.71
TRAP1-215	ENST00000576106	SLIT3	O75094	1523 aa		31.98	■■■□□ 2.71
TRAP1-215	ENST00000576106	ZBTB7C	A1YPR0	619 aa		31.97	■■■□□ 2.71
TRAP1-215	ENST00000576106	AKAP12	Q02952	1782 aa		31.96	■■■□□ 2.71
TRAP1-215	ENST00000576106	PIK3C2A	O00443	1686 aa		31.95	■■■□□ 2.71
TRAP1-215	ENST00000576106		A0A1W2PP64	1363 aa		31.95	■■■□□ 2.71
TRAP1-215	ENST00000576106	EDC4	Q6P2E9	1401 aa	Known RBP	31.95	■■■□□ 2.71
TRAP1-215	ENST00000576106	SPATA31A1	Q5TZJ5	1347 aa		31.94	■■■□□ 2.7
TRAP1-215	ENST00000576106	AATK	Q6ZMQ8	1374 aa		31.94	■■■□□ 2.7
TRAP1-215	ENST00000576106	USP31	Q70CQ4	1352 aa		31.93	■■■□□ 2.7
TRAP1-215	ENST00000576106	NME9	Q86XW9	330 aa		31.92	■■■□□ 2.7
TRAP1-215	ENST00000576106	SOX12	O15370	315 aa		31.91	■■■□□ 2.7
TRAP1-215	ENST00000576106	KRT27	Q7Z3Y8	459 aa		31.91	■■■□□ 2.7
TRAP1-215	ENST00000576106	CAMTA1	Q9Y6Y1	1673 aa		31.91	■■■□□ 2.7
TRAP1-215	ENST00000576106	LARP1	Q6PKG0	1096 aa	Known RBP	31.9	■■■□□ 2.7
TRAP1-215	ENST00000576106	ARHGEF25	Q86VW2	580 aa		31.9	■■■□□ 2.7
TRAP1-215	ENST00000576106	ZRANB1	Q9UGI0	708 aa		31.89	■■■□□ 2.7
TRAP1-215	ENST00000576106	MON2	Q7Z3U7	1717 aa		31.89	■■■□□ 2.69
TRAP1-215	ENST00000576106	CCDC125	Q86Z20	511 aa		31.88	■■■□□ 2.69
TRAP1-215	ENST00000576106	USP35	Q9P2H5	1018 aa		31.88	■■■□□ 2.69
TRAP1-215	ENST00000576106	ANKRD36B	Q8N2N9	1353 aa		31.86	■■■□□ 2.69
TRAP1-215	ENST00000576106	LMO7	Q8WWI1	1683 aa		31.86	■■■□□ 2.69
TRAP1-215	ENST00000576106	EIF4G2	P78344	907 aa	Known RBP eCLIP	31.85	■■■□□ 2.69
TRAP1-215	ENST00000576106	COL5A2	P05997	1499 aa	Predicted RBP	31.84	■■■□□ 2.69
TRAP1-215	ENST00000576106	BARGIN	Q6ZT62	677 aa		31.84	■■■□□ 2.69
TRAP1-215	ENST00000576106	TCP11L2	Q8N4U5	519 aa		31.84	■■■□□ 2.69
TRAP1-215	ENST00000576106	THRAP3	Q9Y2W1	955 aa	Known RBP	31.82	■■■□□ 2.68
TRAP1-215	ENST00000576106	AXIN2	Q9Y2T1	843 aa		31.81	■■■□□ 2.68
TRAP1-215	ENST00000576106	NFAT5	O94916	1531 aa		31.8	■■■□□ 2.68
TRAP1-215	ENST00000576106	CRB1	P82279	1406 aa		31.78	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms