RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 EIF4G2P78344 907 aaKnown RBP eCLIP11.11□□□□□ -0.63
CCDC40-215ENST00000576033 PSME1Q06323 249 aa11.11□□□□□ -0.63
CCDC40-215ENST00000576033 LMOD2Q6P5Q4 547 aa11.11□□□□□ -0.63
CCDC40-215ENST00000576033 TMC1Q8TDI8 760 aa11.11□□□□□ -0.63
CCDC40-215ENST00000576033 POLR3GLQ9BT43 218 aa11.11□□□□□ -0.63
CCDC40-215ENST00000576033 SLC12A5Q9H2X9 1139 aa11.11□□□□□ -0.63
CCDC40-215ENST00000576033 ATAD2Q6PL18 1390 aa11.11□□□□□ -0.63
CCDC40-215ENST00000576033 KIF20BQ96Q89 1820 aa11.11□□□□□ -0.63
CCDC40-215ENST00000576033 SSH2Q76I76 1423 aa11.1□□□□□ -0.63
CCDC40-215ENST00000576033 PLEKHG3A1L390 1219 aa11.1□□□□□ -0.63
CCDC40-215ENST00000576033 PAK3O75914 559 aaPredicted RBP11.1□□□□□ -0.63
CCDC40-215ENST00000576033 SBNO1A3KN83 1393 aa11.1□□□□□ -0.63
CCDC40-215ENST00000576033 ADAMTS2O95450 1211 aa11.09□□□□□ -0.63
CCDC40-215ENST00000576033 LRRC59Q96AG4 307 aaKnown RBP11.09□□□□□ -0.63
CCDC40-215ENST00000576033 ZRANB1Q9UGI0 708 aa11.09□□□□□ -0.63
CCDC40-215ENST00000576033 USP54Q70EL1 1684 aa11.08□□□□□ -0.64
CCDC40-215ENST00000576033 KTN1Q86UP2 1357 aaKnown RBP11.08□□□□□ -0.64
CCDC40-215ENST00000576033 TMF1P82094 1093 aa11.08□□□□□ -0.64
CCDC40-215ENST00000576033 NRAPQ86VF7 1730 aa11.08□□□□□ -0.64
CCDC40-215ENST00000576033 RGS17Q9UGC6 210 aaPredicted RBP11.07□□□□□ -0.64
CCDC40-215ENST00000576033 SLIT3O75094 1523 aa11.07□□□□□ -0.64
CCDC40-215ENST00000576033 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.06□□□□□ -0.64
CCDC40-215ENST00000576033 KIF7Q2M1P5 1343 aa11.06□□□□□ -0.64
CCDC40-215ENST00000576033 SPATA31A6Q5VVP1 1343 aa11.06□□□□□ -0.64
CCDC40-215ENST00000576033 LTN1O94822 1766 aa11.05□□□□□ -0.64
CCDC40-215ENST00000576033 ARHGEF10O15013 1369 aa11.05□□□□□ -0.64
CCDC40-215ENST00000576033 NME9Q86XW9 330 aa11.05□□□□□ -0.64
CCDC40-215ENST00000576033 POTEDQ86YR6 584 aa11.05□□□□□ -0.64
CCDC40-215ENST00000576033 C8orf37Q96NL8 207 aa11.05□□□□□ -0.64
CCDC40-215ENST00000576033 NSD3Q9BZ95 1437 aa11.05□□□□□ -0.64
CCDC40-215ENST00000576033 RGPD5Q99666 1765 aa11.05□□□□□ -0.64
CCDC40-215ENST00000576033 TTC21BQ7Z4L5 1316 aa11.05□□□□□ -0.64
CCDC40-215ENST00000576033 NFAT5O94916 1531 aa11.04□□□□□ -0.64
CCDC40-215ENST00000576033 ANKRD36BQ8N2N9 1353 aa11.04□□□□□ -0.64
CCDC40-215ENST00000576033 SOX12O15370 315 aa11.04□□□□□ -0.64
CCDC40-215ENST00000576033 MEX3CQ5U5Q3 659 aaKnown RBP11.04□□□□□ -0.64
CCDC40-215ENST00000576033 LMO7Q8WWI1 1683 aa11.04□□□□□ -0.64
CCDC40-215ENST00000576033 WASHC2AQ641Q2 1341 aa11.04□□□□□ -0.64
CCDC40-215ENST00000576033 OVOS2A0A0J9YW53 1432 aa11.03□□□□□ -0.64
CCDC40-215ENST00000576033 OVOS2Q6IE36 1432 aa11.03□□□□□ -0.64
CCDC40-215ENST00000576033 EDC4Q6P2E9 1401 aaKnown RBP11.03□□□□□ -0.64
CCDC40-215ENST00000576033 ABTB2Q8N961 1025 aa11.03□□□□□ -0.64
CCDC40-215ENST00000576033 CARD14Q9BXL6 1004 aa11.03□□□□□ -0.64
CCDC40-215ENST00000576033 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.03□□□□□ -0.64
CCDC40-215ENST00000576033 ANKRD26Q9UPS8 1709 aa11.03□□□□□ -0.64
CCDC40-215ENST00000576033 USP19O94966 1318 aa11.03□□□□□ -0.64
CCDC40-215ENST00000576033 COL18A1P39060 1754 aa11.03□□□□□ -0.64
CCDC40-215ENST00000576033 COL14A1Q05707 1796 aaKnown RBP11.03□□□□□ -0.64
CCDC40-215ENST00000576033 AFF2P51816 1311 aa11.02□□□□□ -0.65
CCDC40-215ENST00000576033 KIAA0232Q92628 1395 aa11.02□□□□□ -0.65
CCDC40-215ENST00000576033 CCDC7Q96M83 1385 aa11.02□□□□□ -0.65
CCDC40-215ENST00000576033 PEAK1Q9H792 1746 aa11.01□□□□□ -0.65
CCDC40-215ENST00000576033 NWD2Q9ULI1 1742 aa11.01□□□□□ -0.65
CCDC40-215ENST00000576033 FBLN1P23142 703 aa11.01□□□□□ -0.65
CCDC40-215ENST00000576033 ZC3H6P61129 1189 aaKnown RBP11.01□□□□□ -0.65
CCDC40-215ENST00000576033 CHRNA2Q15822 529 aa11.01□□□□□ -0.65
CCDC40-215ENST00000576033 POTEAQ6S8J7 498 aa11.01□□□□□ -0.65
CCDC40-215ENST00000576033 ILDR2Q71H61 639 aa11.01□□□□□ -0.65
CCDC40-215ENST00000576033 NINLQ9Y2I6 1382 aa11.01□□□□□ -0.65
CCDC40-215ENST00000576033 SLIT2O94813 1529 aa11□□□□□ -0.65
CCDC40-215ENST00000576033 GLI3P10071 1580 aa11□□□□□ -0.65
CCDC40-215ENST00000576033 ZBTB7CA1YPR0 619 aa11□□□□□ -0.65
CCDC40-215ENST00000576033 HAP1P54257 671 aaPredicted RBP11□□□□□ -0.65
CCDC40-215ENST00000576033 HDGFL2Q7Z4V5 671 aaPredicted RBP11□□□□□ -0.65
CCDC40-215ENST00000576033 BCL9LQ86UU0 1499 aa11□□□□□ -0.65
CCDC40-215ENST00000576033 CAMTA1Q9Y6Y1 1673 aa10.99□□□□□ -0.65
CCDC40-215ENST00000576033 NLRP6P59044 892 aa10.99□□□□□ -0.65
CCDC40-215ENST00000576033 PUS7Q96PZ0 661 aaKnown RBP10.99□□□□□ -0.65
CCDC40-215ENST00000576033 FAM83GA6ND36 823 aa10.98□□□□□ -0.65
CCDC40-215ENST00000576033 GGNBP2Q9H3C7 697 aa10.98□□□□□ -0.65
CCDC40-215ENST00000576033 TERF2IPQ9NYB0 399 aa10.98□□□□□ -0.65
CCDC40-215ENST00000576033 TTC21AQ8NDW8 1320 aa10.98□□□□□ -0.65
CCDC40-215ENST00000576033 RGPD2P0DJD1 1756 aa10.98□□□□□ -0.65
CCDC40-215ENST00000576033 NGLY1Q96IV0 654 aa10.97□□□□□ -0.65
CCDC40-215ENST00000576033 ZNF692Q9BU19 519 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-215ENST00000576033 PANK3Q9H999 370 aa10.97□□□□□ -0.65
CCDC40-215ENST00000576033 WNK3Q9BYP7 1800 aa10.97□□□□□ -0.65
CCDC40-215ENST00000576033 ATRNO75882 1429 aa10.96□□□□□ -0.65
CCDC40-215ENST00000576033 BRD4O60885 1362 aaPredicted RBP10.96□□□□□ -0.65
CCDC40-215ENST00000576033 USP31Q70CQ4 1352 aa10.96□□□□□ -0.65
CCDC40-215ENST00000576033 GCP02774 474 aa10.96□□□□□ -0.65
CCDC40-215ENST00000576033 CNGB1Q14028 1251 aaPredicted RBP10.96□□□□□ -0.65
CCDC40-215ENST00000576033 CDCA8Q53HL2 280 aa10.96□□□□□ -0.65
CCDC40-215ENST00000576033 BRWD3Q6RI45 1802 aa10.95□□□□□ -0.66
CCDC40-215ENST00000576033 RGS12O14924 1447 aa10.95□□□□□ -0.66
CCDC40-215ENST00000576033 EP400Q96L91 3159 aa10.95□□□□□ -0.66
CCDC40-215ENST00000576033 FYB1O15117 783 aa10.95□□□□□ -0.66
CCDC40-215ENST00000576033 NLRP13Q86W25 1043 aa10.95□□□□□ -0.66
CCDC40-215ENST00000576033 PRDM11Q9NQV5 511 aa10.95□□□□□ -0.66
CCDC40-215ENST00000576033 BTG4Q9NY30 223 aa10.95□□□□□ -0.66
CCDC40-215ENST00000576033 USP21Q9UK80 565 aa10.95□□□□□ -0.66
CCDC40-215ENST00000576033 COL5A2P05997 1499 aaPredicted RBP10.94□□□□□ -0.66
CCDC40-215ENST00000576033 FNBP4Q8N3X1 1017 aaPredicted RBP10.94□□□□□ -0.66
CCDC40-215ENST00000576033 CPDO75976 1380 aa10.93□□□□□ -0.66
CCDC40-215ENST00000576033 RRS1Q15050 365 aaKnown RBP10.93□□□□□ -0.66
CCDC40-215ENST00000576033 AXIN2Q9Y2T1 843 aa10.93□□□□□ -0.66
CCDC40-215ENST00000576033 MAP2P11137 1827 aaKnown RBP10.93□□□□□ -0.66
CCDC40-215ENST00000576033 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
CCDC40-215ENST00000576033 SLC24A1O60721 1099 aa10.92□□□□□ -0.66
CCDC40-215ENST00000576033 STRN4Q9NRL3 753 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms