RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 TANGO6Q9C0B7 1094 aa12.47□□□□□ -0.41
USP6-206ENST00000575709 CSB-PGBD3P0DP91 1061 aa12.47□□□□□ -0.41
USP6-206ENST00000575709 CEP83Q9Y592 693 aa12.47□□□□□ -0.41
USP6-206ENST00000575709 ANKRD18BA2A2Z9 1011 aa12.47□□□□□ -0.41
USP6-206ENST00000575709 GTF2E1P29083 439 aaPredicted RBP12.46□□□□□ -0.41
USP6-206ENST00000575709 GIGYF2Q6Y7W6 1299 aaKnown RBP12.46□□□□□ -0.41
USP6-206ENST00000575709 HDGFL2Q7Z4V5 671 aaPredicted RBP12.46□□□□□ -0.41
USP6-206ENST00000575709 FYB1O15117 783 aa12.46□□□□□ -0.41
USP6-206ENST00000575709 ATP2C2O75185 946 aa12.46□□□□□ -0.41
USP6-206ENST00000575709 MIPOL1Q8TD10 442 aa12.46□□□□□ -0.41
USP6-206ENST00000575709 KCNH8Q96L42 1107 aa12.46□□□□□ -0.41
USP6-206ENST00000575709 TNMDQ9H2S6 317 aa12.46□□□□□ -0.41
USP6-206ENST00000575709 FIBPO43427 364 aa12.46□□□□□ -0.42
USP6-206ENST00000575709 HSP90AB4PQ58FF6 505 aa12.46□□□□□ -0.42
USP6-206ENST00000575709 C6orf163Q5TEZ5 329 aa12.46□□□□□ -0.42
USP6-206ENST00000575709 JAKMIP3Q5VZ66 844 aa12.46□□□□□ -0.42
USP6-206ENST00000575709 GCOM1H8Y6P7 765 aaPredicted RBP12.46□□□□□ -0.42
USP6-206ENST00000575709 MYZAPP0CAP1 466 aa12.46□□□□□ -0.42
USP6-206ENST00000575709 CTR9Q6PD62 1173 aa12.45□□□□□ -0.42
USP6-206ENST00000575709 CEP57Q86XR8 500 aa12.45□□□□□ -0.42
USP6-206ENST00000575709 IFIT2P09913 472 aaKnown RBP12.45□□□□□ -0.42
USP6-206ENST00000575709 CCDC6Q16204 474 aa12.45□□□□□ -0.42
USP6-206ENST00000575709 CLIP1P30622 1438 aa12.45□□□□□ -0.42
USP6-206ENST00000575709 TTC31Q49AM3 519 aaPredicted RBP12.45□□□□□ -0.42
USP6-206ENST00000575709 COG6Q9Y2V7 657 aa12.45□□□□□ -0.42
USP6-206ENST00000575709 ZCCHC6Q5VYS8 1495 aaKnown RBP12.44□□□□□ -0.42
USP6-206ENST00000575709 MPHOSPH10O00566 681 aaKnown RBP12.44□□□□□ -0.42
USP6-206ENST00000575709 WWC2Q6AWC2 1192 aa12.44□□□□□ -0.42
USP6-206ENST00000575709 FEZ1Q99689 392 aa12.44□□□□□ -0.42
USP6-206ENST00000575709 XBP1P17861 261 aa12.44□□□□□ -0.42
USP6-206ENST00000575709 HSPA4P34932 840 aa12.44□□□□□ -0.42
USP6-206ENST00000575709 TMCO4Q5TGY1 634 aa12.44□□□□□ -0.42
USP6-206ENST00000575709 RRP7AQ9Y3A4 280 aaKnown RBP12.44□□□□□ -0.42
USP6-206ENST00000575709 FEZ2Q9UHY8 353 aaPredicted RBP12.44□□□□□ -0.42
USP6-206ENST00000575709 MCM3P25205 808 aa12.44□□□□□ -0.42
USP6-206ENST00000575709 PLEKHD1A6NEE1 506 aa12.44□□□□□ -0.42
USP6-206ENST00000575709 CBFA2T2O43439 604 aa12.44□□□□□ -0.42
USP6-206ENST00000575709 SPECC1LQ69YQ0 1117 aa12.44□□□□□ -0.42
USP6-206ENST00000575709 PIP4K2AP48426 406 aaPredicted RBP12.43□□□□□ -0.42
USP6-206ENST00000575709 TCHPQ9BT92 498 aa12.43□□□□□ -0.42
USP6-206ENST00000575709 RAI14Q9P0K7 980 aa12.43□□□□□ -0.42
USP6-206ENST00000575709 EPB41L2O43491 1005 aaKnown RBP12.43□□□□□ -0.42
USP6-206ENST00000575709 KRT18P05783 430 aaKnown RBP12.43□□□□□ -0.42
USP6-206ENST00000575709 GRIPAP1Q4V328 841 aa12.43□□□□□ -0.42
USP6-206ENST00000575709 ANAPC15P60006 121 aa12.43□□□□□ -0.42
USP6-206ENST00000575709 FBF1Q8TES7 1133 aa12.43□□□□□ -0.42
USP6-206ENST00000575709 CWC22Q9HCG8 908 aaKnown RBP12.43□□□□□ -0.42
USP6-206ENST00000575709 MTMR7Q9Y216 660 aa12.43□□□□□ -0.42
USP6-206ENST00000575709 NOL3O60936 208 aaKnown RBP12.43□□□□□ -0.42
USP6-206ENST00000575709 PDE3BQ13370 1112 aa12.43□□□□□ -0.42
USP6-206ENST00000575709 PTPN14Q15678 1187 aa12.43□□□□□ -0.42
USP6-206ENST00000575709 TAF4BQ92750 862 aa12.43□□□□□ -0.42
USP6-206ENST00000575709 ATP2B1P20020 1258 aa12.43□□□□□ -0.42
USP6-206ENST00000575709 MSL1Q68DK7 614 aa12.43□□□□□ -0.42
USP6-206ENST00000575709 DDX46Q7L014 1031 aaKnown RBP12.43□□□□□ -0.42
USP6-206ENST00000575709 SMARCC1Q92922 1105 aaPredicted RBP12.43□□□□□ -0.42
USP6-206ENST00000575709 SCLT1Q96NL6 688 aa12.43□□□□□ -0.42
USP6-206ENST00000575709 NEBLO76041 1014 aa12.42□□□□□ -0.42
USP6-206ENST00000575709 STK26Q9P289 416 aa12.42□□□□□ -0.42
USP6-206ENST00000575709 RSF1Q96T23 1441 aaPredicted RBP12.42□□□□□ -0.42
USP6-206ENST00000575709 PDE1CQ14123 709 aaPredicted RBP12.42□□□□□ -0.42
USP6-206ENST00000575709 NAA25Q14CX7 972 aa12.42□□□□□ -0.42
USP6-206ENST00000575709 MICALL1Q8N3F8 863 aa12.42□□□□□ -0.42
USP6-206ENST00000575709 NUP133Q8WUM0 1156 aa12.42□□□□□ -0.42
USP6-206ENST00000575709 APBB1IPQ7Z5R6 666 aaPredicted RBP12.42□□□□□ -0.42
USP6-206ENST00000575709 RALYLQ86SE5 291 aaKnown RBP12.42□□□□□ -0.42
USP6-206ENST00000575709 ARHGAP29Q52LW3 1261 aa12.42□□□□□ -0.42
USP6-206ENST00000575709 VPS37DQ86XT2 251 aa12.41□□□□□ -0.42
USP6-206ENST00000575709 SCRIBQ14160 1630 aa12.41□□□□□ -0.42
USP6-206ENST00000575709 CEP120Q8N960 986 aa12.41□□□□□ -0.42
USP6-206ENST00000575709 TMX1Q9H3N1 280 aa12.41□□□□□ -0.42
USP6-206ENST00000575709 ZKSCAN2Q63HK3 967 aa12.41□□□□□ -0.42
USP6-206ENST00000575709 FILIP1Q7Z7B0 1213 aa12.41□□□□□ -0.42
USP6-206ENST00000575709 DACH1Q9UI36 760 aa12.41□□□□□ -0.42
USP6-206ENST00000575709 ROCK2O75116 1388 aaKnown RBP12.41□□□□□ -0.42
USP6-206ENST00000575709 STIM1Q13586 685 aa12.41□□□□□ -0.42
USP6-206ENST00000575709 CCDC178Q5BJE1 867 aa12.41□□□□□ -0.42
USP6-206ENST00000575709 GSTTP1A0A1W2PQM5 241 aa12.41□□□□□ -0.42
USP6-206ENST00000575709 KIF18AQ8NI77 898 aa12.41□□□□□ -0.42
USP6-206ENST00000575709 ZSCAN30Q86W11 494 aa12.4□□□□□ -0.42
USP6-206ENST00000575709 ELL2O00472 640 aaPredicted RBP12.4□□□□□ -0.42
USP6-206ENST00000575709 ZNF396Q96N95 335 aaPredicted RBP12.4□□□□□ -0.42
USP6-206ENST00000575709 VGLL3A8MV65 326 aa12.4□□□□□ -0.42
USP6-206ENST00000575709 ZFYP08048 801 aaPredicted RBP12.4□□□□□ -0.42
USP6-206ENST00000575709 HYPKQ9NX55 129 aa12.4□□□□□ -0.42
USP6-206ENST00000575709 RSPH14Q9UHP6 348 aa12.4□□□□□ -0.42
USP6-206ENST00000575709 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.39□□□□□ -0.43
USP6-206ENST00000575709 V9GYY5 206 aaPredicted RBP12.39□□□□□ -0.43
USP6-206ENST00000575709 TTC36A6NLP5 189 aa12.39□□□□□ -0.43
USP6-206ENST00000575709 SPECC1Q5M775 1068 aa12.39□□□□□ -0.43
USP6-206ENST00000575709 C9orf78Q9NZ63 289 aaPredicted RBP12.39□□□□□ -0.43
USP6-206ENST00000575709 RFC1P35251 1148 aaPredicted RBP12.39□□□□□ -0.43
USP6-206ENST00000575709 GBP6Q6ZN66 633 aa12.39□□□□□ -0.43
USP6-206ENST00000575709 URI1O94763 535 aaPredicted RBP12.39□□□□□ -0.43
USP6-206ENST00000575709 ZMAT2Q96NC0 199 aaKnown RBP12.39□□□□□ -0.43
USP6-206ENST00000575709 ZHX3Q9H4I2 956 aa12.39□□□□□ -0.43
USP6-206ENST00000575709 SEPT14Q6ZU15 432 aa12.38□□□□□ -0.43
USP6-206ENST00000575709 WHAMMQ8TF30 809 aa12.38□□□□□ -0.43
USP6-206ENST00000575709 XPCQ01831 940 aaPredicted RBP12.38□□□□□ -0.43
USP6-206ENST00000575709 NBPF1Q3BBV0 1214 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms