RNA–Protein interactions for RNA: ENST00000575707.5

TRAP1-213, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-213ENST00000575707 CCDC61Q9Y6R9 512 aa23.87■■□□□ 1.41
TRAP1-213ENST00000575707 POLR3AO14802 1390 aaPredicted RBP23.87■■□□□ 1.41
TRAP1-213ENST00000575707 BRWD3Q6RI45 1802 aa23.87■■□□□ 1.41
TRAP1-213ENST00000575707 CCDC125Q86Z20 511 aa23.86■■□□□ 1.41
TRAP1-213ENST00000575707 L3MBTL2Q969R5 705 aa23.86■■□□□ 1.41
TRAP1-213ENST00000575707 ONECUT3O60422 494 aaPredicted RBP23.85■■□□□ 1.41
TRAP1-213ENST00000575707 CENPJQ9HC77 1338 aaPredicted RBP23.84■■□□□ 1.41
TRAP1-213ENST00000575707 SEPT12Q8IYM1 358 aa23.84■■□□□ 1.41
TRAP1-213ENST00000575707 CCDC9Q9Y3X0 531 aaKnown RBP23.84■■□□□ 1.41
TRAP1-213ENST00000575707 PLEKHG3A1L390 1219 aa23.83■■□□□ 1.41
TRAP1-213ENST00000575707 BTG4Q9NY30 223 aa23.83■■□□□ 1.41
TRAP1-213ENST00000575707 ACEP12821 1306 aa23.83■■□□□ 1.4
TRAP1-213ENST00000575707 NBPF8Q3BBV2 869 aa23.82■■□□□ 1.4
TRAP1-213ENST00000575707 QRICH2Q9H0J4 1663 aa23.82■■□□□ 1.4
TRAP1-213ENST00000575707 PHRF1Q9P1Y6 1649 aaKnown RBP23.81■■□□□ 1.4
TRAP1-213ENST00000575707 SIN3AQ96ST3 1273 aa23.81■■□□□ 1.4
TRAP1-213ENST00000575707 TRPM1Q7Z4N2 1603 aa23.81■■□□□ 1.4
TRAP1-213ENST00000575707 BLMP54132 1417 aaPredicted RBP23.78■■□□□ 1.4
TRAP1-213ENST00000575707 SRPK2P78362 688 aaKnown RBP23.78■■□□□ 1.4
TRAP1-213ENST00000575707 PRDM11Q9NQV5 511 aa23.78■■□□□ 1.4
TRAP1-213ENST00000575707 PPIP5K1Q6PFW1 1433 aa23.77■■□□□ 1.4
TRAP1-213ENST00000575707 KIAA0232Q92628 1395 aa23.76■■□□□ 1.39
TRAP1-213ENST00000575707 NEUROD1Q13562 356 aa23.75■■□□□ 1.39
TRAP1-213ENST00000575707 KRT27Q7Z3Y8 459 aa23.75■■□□□ 1.39
TRAP1-213ENST00000575707 CABP2Q9NPB3 220 aa23.75■■□□□ 1.39
TRAP1-213ENST00000575707 FAM98CQ17RN3 349 aaKnown RBP23.74■■□□□ 1.39
TRAP1-213ENST00000575707 SPATA31A5Q5VU36 1347 aa23.74■■□□□ 1.39
TRAP1-213ENST00000575707 SPATA31A7Q8IWB4 1347 aa23.74■■□□□ 1.39
TRAP1-213ENST00000575707 NUTM2GQ5VZR2 741 aa23.73■■□□□ 1.39
TRAP1-213ENST00000575707 BRD4O60885 1362 aaPredicted RBP23.73■■□□□ 1.39
TRAP1-213ENST00000575707 NRKQ7Z2Y5 1582 aa23.73■■□□□ 1.39
TRAP1-213ENST00000575707 ABTB2Q8N961 1025 aa23.72■■□□□ 1.39
TRAP1-213ENST00000575707 ROCK2O75116 1388 aaKnown RBP23.72■■□□□ 1.39
TRAP1-213ENST00000575707 A0A0G2JS52 829 aa23.71■■□□□ 1.39
TRAP1-213ENST00000575707 MYT1Q01538 1121 aa23.71■■□□□ 1.39
TRAP1-213ENST00000575707 USP19O94966 1318 aa23.7■■□□□ 1.38
TRAP1-213ENST00000575707 ZC3H6P61129 1189 aaKnown RBP23.7■■□□□ 1.38
TRAP1-213ENST00000575707 CHRNA2Q15822 529 aa23.7■■□□□ 1.38
TRAP1-213ENST00000575707 ZRANB1Q9UGI0 708 aa23.7■■□□□ 1.38
TRAP1-213ENST00000575707 THSD7AQ9UPZ6 1657 aa23.7■■□□□ 1.38
TRAP1-213ENST00000575707 EVC2Q86UK5 1308 aa23.68■■□□□ 1.38
TRAP1-213ENST00000575707 SF3B2Q13435 895 aaKnown RBP23.68■■□□□ 1.38
TRAP1-213ENST00000575707 CPDO75976 1380 aa23.67■■□□□ 1.38
TRAP1-213ENST00000575707 NLRP13Q86W25 1043 aa23.67■■□□□ 1.38
TRAP1-213ENST00000575707 CABP1Q9NZU7 370 aa23.67■■□□□ 1.38
TRAP1-213ENST00000575707 USP6P35125 1406 aa23.67■■□□□ 1.38
TRAP1-213ENST00000575707 SPATA31A1Q5TZJ5 1347 aa23.66■■□□□ 1.38
TRAP1-213ENST00000575707 LMO7Q8WWI1 1683 aa23.65■■□□□ 1.38
TRAP1-213ENST00000575707 DEFB132Q7Z7B7 95 aa23.64■■□□□ 1.37
TRAP1-213ENST00000575707 STRN4Q9NRL3 753 aa23.64■■□□□ 1.37
TRAP1-213ENST00000575707 CAMTA1Q9Y6Y1 1673 aa23.64■■□□□ 1.37
TRAP1-213ENST00000575707 GCP02774 474 aa23.63■■□□□ 1.37
TRAP1-213ENST00000575707 SSH2Q76I76 1423 aa23.63■■□□□ 1.37
TRAP1-213ENST00000575707 EVA1CP58658 441 aa23.6■■□□□ 1.37
TRAP1-213ENST00000575707 SLIT3O75094 1523 aa23.59■■□□□ 1.37
TRAP1-213ENST00000575707 RGPD1P0DJD0 1748 aa23.59■■□□□ 1.37
TRAP1-213ENST00000575707 SBNO2Q9Y2G9 1366 aa23.59■■□□□ 1.37
TRAP1-213ENST00000575707 PIK3C2AO00443 1686 aa23.59■■□□□ 1.37
TRAP1-213ENST00000575707 AKAP12Q02952 1782 aa23.59■■□□□ 1.37
TRAP1-213ENST00000575707 NLRP6P59044 892 aa23.58■■□□□ 1.37
TRAP1-213ENST00000575707 BARGINQ6ZT62 677 aa23.58■■□□□ 1.37
TRAP1-213ENST00000575707 BAG6P46379 1132 aa23.57■■□□□ 1.36
TRAP1-213ENST00000575707 ZNF692Q9BU19 519 aaPredicted RBP23.57■■□□□ 1.36
TRAP1-213ENST00000575707 SRCAPQ6ZRS2 3230 aa23.56■■□□□ 1.36
TRAP1-213ENST00000575707 FAM182BQ5T319 152 aa23.56■■□□□ 1.36
TRAP1-213ENST00000575707 LARP1Q6PKG0 1096 aaKnown RBP23.56■■□□□ 1.36
TRAP1-213ENST00000575707 COL5A2P05997 1499 aaPredicted RBP23.56■■□□□ 1.36
TRAP1-213ENST00000575707 TONSLQ96HA7 1378 aa23.55■■□□□ 1.36
TRAP1-213ENST00000575707 USP35Q9P2H5 1018 aa23.55■■□□□ 1.36
TRAP1-213ENST00000575707 CPSF1Q10570 1443 aaKnown RBP23.54■■□□□ 1.36
TRAP1-213ENST00000575707 CARD11Q9BXL7 1154 aa23.54■■□□□ 1.36
TRAP1-213ENST00000575707 TNS1Q9HBL0 1735 aaKnown RBP23.53■■□□□ 1.36
TRAP1-213ENST00000575707 TCP11L2Q8N4U5 519 aa23.53■■□□□ 1.36
TRAP1-213ENST00000575707 THRAP3Q9Y2W1 955 aaKnown RBP23.53■■□□□ 1.36
TRAP1-213ENST00000575707 TTC21BQ7Z4L5 1316 aa23.53■■□□□ 1.36
TRAP1-213ENST00000575707 AATKQ6ZMQ8 1374 aa23.52■■□□□ 1.36
TRAP1-213ENST00000575707 DISP2A7MBM2 1401 aa23.52■■□□□ 1.36
TRAP1-213ENST00000575707 TTC21AQ8NDW8 1320 aa23.52■■□□□ 1.36
TRAP1-213ENST00000575707 FAM196AQ6ZSG2 479 aa23.51■■□□□ 1.35
TRAP1-213ENST00000575707 COL18A1P39060 1754 aa23.5■■□□□ 1.35
TRAP1-213ENST00000575707 MON2Q7Z3U7 1717 aa23.5■■□□□ 1.35
TRAP1-213ENST00000575707 CRB1P82279 1406 aa23.5■■□□□ 1.35
TRAP1-213ENST00000575707 KTN1Q86UP2 1357 aaKnown RBP23.49■■□□□ 1.35
TRAP1-213ENST00000575707 PARP4Q9UKK3 1724 aaKnown RBP23.48■■□□□ 1.35
TRAP1-213ENST00000575707 PDE3BQ13370 1112 aa23.48■■□□□ 1.35
TRAP1-213ENST00000575707 ZBTB7CA1YPR0 619 aa23.47■■□□□ 1.35
TRAP1-213ENST00000575707 EN1Q05925 392 aaPredicted RBP23.47■■□□□ 1.35
TRAP1-213ENST00000575707 TRIM26Q12899 539 aaPredicted RBP23.47■■□□□ 1.35
TRAP1-213ENST00000575707 KCNH5Q8NCM2 988 aa23.47■■□□□ 1.35
TRAP1-213ENST00000575707 ARHGEF25Q86VW2 580 aa23.45■■□□□ 1.34
TRAP1-213ENST00000575707 TRIM37O94972 964 aa23.44■■□□□ 1.34
TRAP1-213ENST00000575707 CD163L1Q9NR16 1453 aa23.43■■□□□ 1.34
TRAP1-213ENST00000575707 USP54Q70EL1 1684 aa23.43■■□□□ 1.34
TRAP1-213ENST00000575707 NFAT5O94916 1531 aa23.43■■□□□ 1.34
TRAP1-213ENST00000575707 AXIN2Q9Y2T1 843 aa23.42■■□□□ 1.34
TRAP1-213ENST00000575707 WDR17Q8IZU2 1322 aa23.41■■□□□ 1.34
TRAP1-213ENST00000575707 TOM1L2Q6ZVM7 507 aa23.41■■□□□ 1.34
TRAP1-213ENST00000575707 PUS7Q96PZ0 661 aaKnown RBP23.41■■□□□ 1.34
TRAP1-213ENST00000575707 USP31Q70CQ4 1352 aa23.4■■□□□ 1.34
TRAP1-213ENST00000575707 RGPD5Q99666 1765 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms