RNA–Protein interactions for RNA: ENST00000575514.5

EDC4-211, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 5

Gene EDC4, Length 1,016 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-211ENST00000575514 VPS72Q15906 364 aa25.42■■□□□ 1.66
EDC4-211ENST00000575514 CCDC61Q9Y6R9 512 aa25.42■■□□□ 1.66
EDC4-211ENST00000575514 POLR3AO14802 1390 aaPredicted RBP25.42■■□□□ 1.66
EDC4-211ENST00000575514 QRICH2Q9H0J4 1663 aa25.42■■□□□ 1.66
EDC4-211ENST00000575514 TRPM1Q7Z4N2 1603 aa25.41■■□□□ 1.66
EDC4-211ENST00000575514 NEUROD1Q13562 356 aa25.41■■□□□ 1.66
EDC4-211ENST00000575514 NRAPQ86VF7 1730 aa25.4■■□□□ 1.66
EDC4-211ENST00000575514 COL14A1Q05707 1796 aaKnown RBP25.4■■□□□ 1.66
EDC4-211ENST00000575514 ACEP12821 1306 aa25.38■■□□□ 1.65
EDC4-211ENST00000575514 PLEKHG3A1L390 1219 aa25.38■■□□□ 1.65
EDC4-211ENST00000575514 CCDC9Q9Y3X0 531 aaKnown RBP25.37■■□□□ 1.65
EDC4-211ENST00000575514 BRWD3Q6RI45 1802 aa25.36■■□□□ 1.65
EDC4-211ENST00000575514 SRPK2P78362 688 aaKnown RBP25.36■■□□□ 1.65
EDC4-211ENST00000575514 NBPF8Q3BBV2 869 aa25.36■■□□□ 1.65
EDC4-211ENST00000575514 PHRF1Q9P1Y6 1649 aaKnown RBP25.36■■□□□ 1.65
EDC4-211ENST00000575514 BTG4Q9NY30 223 aa25.35■■□□□ 1.65
EDC4-211ENST00000575514 PPIP5K1Q6PFW1 1433 aa25.34■■□□□ 1.65
EDC4-211ENST00000575514 SEPT12Q8IYM1 358 aa25.33■■□□□ 1.65
EDC4-211ENST00000575514 CABP2Q9NPB3 220 aa25.33■■□□□ 1.65
EDC4-211ENST00000575514 ROCK2O75116 1388 aaKnown RBP25.32■■□□□ 1.64
EDC4-211ENST00000575514 ONECUT3O60422 494 aaPredicted RBP25.31■■□□□ 1.64
EDC4-211ENST00000575514 PRDM11Q9NQV5 511 aa25.31■■□□□ 1.64
EDC4-211ENST00000575514 NUTM2GQ5VZR2 741 aa25.3■■□□□ 1.64
EDC4-211ENST00000575514 CCDC125Q86Z20 511 aa25.3■■□□□ 1.64
EDC4-211ENST00000575514 KIAA0232Q92628 1395 aa25.29■■□□□ 1.64
EDC4-211ENST00000575514 NRKQ7Z2Y5 1582 aa25.27■■□□□ 1.64
EDC4-211ENST00000575514 ABTB2Q8N961 1025 aa25.26■■□□□ 1.63
EDC4-211ENST00000575514 EVC2Q86UK5 1308 aa25.26■■□□□ 1.63
EDC4-211ENST00000575514 FAM98CQ17RN3 349 aaKnown RBP25.25■■□□□ 1.63
EDC4-211ENST00000575514 BRD4O60885 1362 aaPredicted RBP25.24■■□□□ 1.63
EDC4-211ENST00000575514 SPATA31A5Q5VU36 1347 aa25.24■■□□□ 1.63
EDC4-211ENST00000575514 SPATA31A7Q8IWB4 1347 aa25.24■■□□□ 1.63
EDC4-211ENST00000575514 ZC3H6P61129 1189 aaKnown RBP25.24■■□□□ 1.63
EDC4-211ENST00000575514 CABP1Q9NZU7 370 aa25.24■■□□□ 1.63
EDC4-211ENST00000575514 BLMP54132 1417 aaPredicted RBP25.23■■□□□ 1.63
EDC4-211ENST00000575514 A0A0G2JS52 829 aa25.23■■□□□ 1.63
EDC4-211ENST00000575514 MYT1Q01538 1121 aa25.23■■□□□ 1.63
EDC4-211ENST00000575514 CHRNA2Q15822 529 aa25.23■■□□□ 1.63
EDC4-211ENST00000575514 KRT27Q7Z3Y8 459 aa25.23■■□□□ 1.63
EDC4-211ENST00000575514 USP19O94966 1318 aa25.22■■□□□ 1.63
EDC4-211ENST00000575514 USP6P35125 1406 aa25.21■■□□□ 1.63
EDC4-211ENST00000575514 NLRP13Q86W25 1043 aa25.19■■□□□ 1.62
EDC4-211ENST00000575514 THSD7AQ9UPZ6 1657 aa25.19■■□□□ 1.62
EDC4-211ENST00000575514 CPDO75976 1380 aa25.18■■□□□ 1.62
EDC4-211ENST00000575514 TONSLQ96HA7 1378 aa25.18■■□□□ 1.62
EDC4-211ENST00000575514 TRIM26Q12899 539 aaPredicted RBP25.17■■□□□ 1.62
EDC4-211ENST00000575514 STRN4Q9NRL3 753 aa25.17■■□□□ 1.62
EDC4-211ENST00000575514 LMO7Q8WWI1 1683 aa25.17■■□□□ 1.62
EDC4-211ENST00000575514 SPATA31A1Q5TZJ5 1347 aa25.16■■□□□ 1.62
EDC4-211ENST00000575514 SSH2Q76I76 1423 aa25.15■■□□□ 1.62
EDC4-211ENST00000575514 GCP02774 474 aa25.15■■□□□ 1.62
EDC4-211ENST00000575514 CARD11Q9BXL7 1154 aa25.15■■□□□ 1.62
EDC4-211ENST00000575514 PIK3C2AO00443 1686 aa25.14■■□□□ 1.62
EDC4-211ENST00000575514 CAMTA1Q9Y6Y1 1673 aa25.14■■□□□ 1.62
EDC4-211ENST00000575514 AKAP12Q02952 1782 aa25.14■■□□□ 1.62
EDC4-211ENST00000575514 SF3B2Q13435 895 aaKnown RBP25.14■■□□□ 1.62
EDC4-211ENST00000575514 SBNO2Q9Y2G9 1366 aa25.13■■□□□ 1.61
EDC4-211ENST00000575514 SLIT3O75094 1523 aa25.12■■□□□ 1.61
EDC4-211ENST00000575514 EVA1CP58658 441 aa25.12■■□□□ 1.61
EDC4-211ENST00000575514 NLRP6P59044 892 aa25.12■■□□□ 1.61
EDC4-211ENST00000575514 ZRANB1Q9UGI0 708 aa25.12■■□□□ 1.61
EDC4-211ENST00000575514 DEFB132Q7Z7B7 95 aa25.11■■□□□ 1.61
EDC4-211ENST00000575514 ZNF692Q9BU19 519 aaPredicted RBP25.1■■□□□ 1.61
EDC4-211ENST00000575514 LARP1Q6PKG0 1096 aaKnown RBP25.08■■□□□ 1.61
EDC4-211ENST00000575514 USP35Q9P2H5 1018 aa25.08■■□□□ 1.61
EDC4-211ENST00000575514 CPSF1Q10570 1443 aaKnown RBP25.08■■□□□ 1.61
EDC4-211ENST00000575514 SRCAPQ6ZRS2 3230 aa25.08■■□□□ 1.6
EDC4-211ENST00000575514 COL5A2P05997 1499 aaPredicted RBP25.07■■□□□ 1.6
EDC4-211ENST00000575514 TTC21BQ7Z4L5 1316 aa25.07■■□□□ 1.6
EDC4-211ENST00000575514 RGPD1P0DJD0 1748 aa25.06■■□□□ 1.6
EDC4-211ENST00000575514 FAM182BQ5T319 152 aa25.06■■□□□ 1.6
EDC4-211ENST00000575514 BARGINQ6ZT62 677 aa25.05■■□□□ 1.6
EDC4-211ENST00000575514 MON2Q7Z3U7 1717 aa25.05■■□□□ 1.6
EDC4-211ENST00000575514 TTC21AQ8NDW8 1320 aa25.05■■□□□ 1.6
EDC4-211ENST00000575514 KTN1Q86UP2 1357 aaKnown RBP25.05■■□□□ 1.6
EDC4-211ENST00000575514 ZBTB7CA1YPR0 619 aa25.04■■□□□ 1.6
EDC4-211ENST00000575514 AATKQ6ZMQ8 1374 aa25.04■■□□□ 1.6
EDC4-211ENST00000575514 TCP11L2Q8N4U5 519 aa25.03■■□□□ 1.6
EDC4-211ENST00000575514 BAG6P46379 1132 aa25.02■■□□□ 1.6
EDC4-211ENST00000575514 COL18A1P39060 1754 aa25.01■■□□□ 1.59
EDC4-211ENST00000575514 THRAP3Q9Y2W1 955 aaKnown RBP25.01■■□□□ 1.59
EDC4-211ENST00000575514 CRB1P82279 1406 aa25■■□□□ 1.59
EDC4-211ENST00000575514 TNS1Q9HBL0 1735 aaKnown RBP25■■□□□ 1.59
EDC4-211ENST00000575514 KCNH5Q8NCM2 988 aa24.99■■□□□ 1.59
EDC4-211ENST00000575514 CD163L1Q9NR16 1453 aa24.99■■□□□ 1.59
EDC4-211ENST00000575514 FAM196AQ6ZSG2 479 aa24.98■■□□□ 1.59
EDC4-211ENST00000575514 PARP4Q9UKK3 1724 aaKnown RBP24.98■■□□□ 1.59
EDC4-211ENST00000575514 PDE3BQ13370 1112 aa24.97■■□□□ 1.59
EDC4-211ENST00000575514 TMC1Q8TDI8 760 aa24.97■■□□□ 1.59
EDC4-211ENST00000575514 ARHGEF25Q86VW2 580 aa24.96■■□□□ 1.59
EDC4-211ENST00000575514 NFAT5O94916 1531 aa24.96■■□□□ 1.59
EDC4-211ENST00000575514 DISP2A7MBM2 1401 aa24.95■■□□□ 1.59
EDC4-211ENST00000575514 SOX12O15370 315 aa24.95■■□□□ 1.58
EDC4-211ENST00000575514 USP54Q70EL1 1684 aa24.94■■□□□ 1.58
EDC4-211ENST00000575514 EN1Q05925 392 aaPredicted RBP24.94■■□□□ 1.58
EDC4-211ENST00000575514 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.94■■□□□ 1.58
EDC4-211ENST00000575514 AXIN2Q9Y2T1 843 aa24.94■■□□□ 1.58
EDC4-211ENST00000575514 HDGFL2Q7Z4V5 671 aaPredicted RBP24.93■■□□□ 1.58
EDC4-211ENST00000575514 PUS7Q96PZ0 661 aaKnown RBP24.93■■□□□ 1.58
EDC4-211ENST00000575514 SLC12A5Q9H2X9 1139 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 410.9 ms