RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 MARF1Q9Y4F3 1742 aaKnown RBP21.22■□□□□ 0.99
LITAF-217ENST00000575426 PLEKHG5O94827 1062 aa21.22■□□□□ 0.99
LITAF-217ENST00000575426 BRD4O60885 1362 aaPredicted RBP21.22■□□□□ 0.99
LITAF-217ENST00000575426 ADAMTS2O95450 1211 aa21.21■□□□□ 0.99
LITAF-217ENST00000575426 HDGFL2Q7Z4V5 671 aaPredicted RBP21.21■□□□□ 0.99
LITAF-217ENST00000575426 SLC12A5Q9H2X9 1139 aa21.2■□□□□ 0.98
LITAF-217ENST00000575426 TERF2IPQ9NYB0 399 aa21.2■□□□□ 0.98
LITAF-217ENST00000575426 ABTB2Q8N961 1025 aa21.19■□□□□ 0.98
LITAF-217ENST00000575426 KTN1Q86UP2 1357 aaKnown RBP21.19■□□□□ 0.98
LITAF-217ENST00000575426 NINLQ9Y2I6 1382 aa21.19■□□□□ 0.98
LITAF-217ENST00000575426 USP6P35125 1406 aa21.19■□□□□ 0.98
LITAF-217ENST00000575426 CABLES1Q8TDN4 633 aa21.17■□□□□ 0.98
LITAF-217ENST00000575426 C8orf37Q96NL8 207 aa21.17■□□□□ 0.98
LITAF-217ENST00000575426 MON2Q7Z3U7 1717 aa21.17■□□□□ 0.98
LITAF-217ENST00000575426 ABCA3Q99758 1704 aa21.16■□□□□ 0.98
LITAF-217ENST00000575426 NGLY1Q96IV0 654 aa21.16■□□□□ 0.98
LITAF-217ENST00000575426 CPSF1Q10570 1443 aaKnown RBP21.15■□□□□ 0.98
LITAF-217ENST00000575426 NUTM2GQ5VZR2 741 aa21.15■□□□□ 0.98
LITAF-217ENST00000575426 POLR3GLQ9BT43 218 aa21.15■□□□□ 0.98
LITAF-217ENST00000575426 NLRP13Q86W25 1043 aa21.14■□□□□ 0.97
LITAF-217ENST00000575426 TTC21BQ7Z4L5 1316 aa21.12■□□□□ 0.97
LITAF-217ENST00000575426 TTC21AQ8NDW8 1320 aa21.12■□□□□ 0.97
LITAF-217ENST00000575426 ZNF772Q68DY9 489 aaPredicted RBP21.12■□□□□ 0.97
LITAF-217ENST00000575426 AFF2P51816 1311 aa21.11■□□□□ 0.97
LITAF-217ENST00000575426 NLRP6P59044 892 aa21.11■□□□□ 0.97
LITAF-217ENST00000575426 CRYBG1Q9Y4K1 1723 aa21.11■□□□□ 0.97
LITAF-217ENST00000575426 CD163L1Q9NR16 1453 aa21.11■□□□□ 0.97
LITAF-217ENST00000575426 NRKQ7Z2Y5 1582 aa21.1■□□□□ 0.97
LITAF-217ENST00000575426 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.1■□□□□ 0.97
LITAF-217ENST00000575426 PHRF1Q9P1Y6 1649 aaKnown RBP21.1■□□□□ 0.97
LITAF-217ENST00000575426 SSH2Q76I76 1423 aa21.1■□□□□ 0.97
LITAF-217ENST00000575426 A0A1W2PP64 1363 aa21.1■□□□□ 0.97
LITAF-217ENST00000575426 RGS17Q9UGC6 210 aaPredicted RBP21.09■□□□□ 0.97
LITAF-217ENST00000575426 EDC4Q6P2E9 1401 aaKnown RBP21.09■□□□□ 0.97
LITAF-217ENST00000575426 ANKRD36BQ8N2N9 1353 aa21.09■□□□□ 0.97
LITAF-217ENST00000575426 PIK3C2AO00443 1686 aa21.09■□□□□ 0.97
LITAF-217ENST00000575426 MYOM1P52179 1685 aa21.07■□□□□ 0.96
LITAF-217ENST00000575426 ZEB1P37275 1124 aaPredicted RBP21.06■□□□□ 0.96
LITAF-217ENST00000575426 USP21Q9UK80 565 aa21.06■□□□□ 0.96
LITAF-217ENST00000575426 ZC3H6P61129 1189 aaKnown RBP21.04■□□□□ 0.96
LITAF-217ENST00000575426 FNBP4Q8N3X1 1017 aaPredicted RBP21.04■□□□□ 0.96
LITAF-217ENST00000575426 PLCH1Q4KWH8 1693 aa21.04■□□□□ 0.96
LITAF-217ENST00000575426 USP19O94966 1318 aa21.04■□□□□ 0.96
LITAF-217ENST00000575426 COL14A1Q05707 1796 aaKnown RBP21.03■□□□□ 0.96
LITAF-217ENST00000575426 GCP02774 474 aa21.03■□□□□ 0.96
LITAF-217ENST00000575426 PRDM11Q9NQV5 511 aa21.03■□□□□ 0.96
LITAF-217ENST00000575426 NWD2Q9ULI1 1742 aa21.03■□□□□ 0.96
LITAF-217ENST00000575426 FAM83GA6ND36 823 aa21.02■□□□□ 0.96
LITAF-217ENST00000575426 POTEAQ6S8J7 498 aa21.02■□□□□ 0.96
LITAF-217ENST00000575426 NME9Q86XW9 330 aa21.02■□□□□ 0.96
LITAF-217ENST00000575426 KCNH5Q8NCM2 988 aa21.02■□□□□ 0.96
LITAF-217ENST00000575426 QTRT2Q9H974 415 aaKnown RBP21.02■□□□□ 0.96
LITAF-217ENST00000575426 C11orf95C9JLR9 678 aaPredicted RBP21.01■□□□□ 0.95
LITAF-217ENST00000575426 TRPC5Q9UL62 973 aaPredicted RBP21■□□□□ 0.95
LITAF-217ENST00000575426 TNKS1BP1Q9C0C2 1729 aaKnown RBP21■□□□□ 0.95
LITAF-217ENST00000575426 KIF20BQ96Q89 1820 aa20.99■□□□□ 0.95
LITAF-217ENST00000575426 USP54Q70EL1 1684 aa20.99■□□□□ 0.95
LITAF-217ENST00000575426 SLIT3O75094 1523 aa20.99■□□□□ 0.95
LITAF-217ENST00000575426 USP31Q70CQ4 1352 aa20.99■□□□□ 0.95
LITAF-217ENST00000575426 KIAA0232Q92628 1395 aa20.99■□□□□ 0.95
LITAF-217ENST00000575426 UNC5CLQ8IV45 518 aa20.99■□□□□ 0.95
LITAF-217ENST00000575426 SLIT2O94813 1529 aa20.99■□□□□ 0.95
LITAF-217ENST00000575426 ZBTB7CA1YPR0 619 aa20.98■□□□□ 0.95
LITAF-217ENST00000575426 SOX12O15370 315 aa20.98■□□□□ 0.95
LITAF-217ENST00000575426 RXRBP28702 533 aa20.98■□□□□ 0.95
LITAF-217ENST00000575426 ZRANB1Q9UGI0 708 aa20.98■□□□□ 0.95
LITAF-217ENST00000575426 CHRNA2Q15822 529 aa20.97■□□□□ 0.95
LITAF-217ENST00000575426 COG3Q96JB2 828 aa20.97■□□□□ 0.95
LITAF-217ENST00000575426 BTG4Q9NY30 223 aa20.97■□□□□ 0.95
LITAF-217ENST00000575426 KIF7Q2M1P5 1343 aa20.97■□□□□ 0.95
LITAF-217ENST00000575426 BCL9LQ86UU0 1499 aa20.96■□□□□ 0.95
LITAF-217ENST00000575426 ILDR2Q71H61 639 aa20.96■□□□□ 0.95
LITAF-217ENST00000575426 CPDO75976 1380 aa20.96■□□□□ 0.95
LITAF-217ENST00000575426 RBM6P78332 1123 aaKnown RBP20.95■□□□□ 0.94
LITAF-217ENST00000575426 PANK3Q9H999 370 aa20.95■□□□□ 0.94
LITAF-217ENST00000575426 NSD3Q9BZ95 1437 aa20.95■□□□□ 0.94
LITAF-217ENST00000575426 CARD14Q9BXL6 1004 aa20.94■□□□□ 0.94
LITAF-217ENST00000575426 CCDC9Q9Y3X0 531 aaKnown RBP20.94■□□□□ 0.94
LITAF-217ENST00000575426 FYB1O15117 783 aa20.93■□□□□ 0.94
LITAF-217ENST00000575426 EVA1CP58658 441 aa20.93■□□□□ 0.94
LITAF-217ENST00000575426 ATRNO75882 1429 aa20.93■□□□□ 0.94
LITAF-217ENST00000575426 NRAPQ86VF7 1730 aa20.92■□□□□ 0.94
LITAF-217ENST00000575426 LTN1O94822 1766 aa20.92■□□□□ 0.94
LITAF-217ENST00000575426 GGNBP2Q9H3C7 697 aa20.92■□□□□ 0.94
LITAF-217ENST00000575426 OVOS2A0A0J9YW53 1432 aa20.91■□□□□ 0.94
LITAF-217ENST00000575426 CGNL1Q0VF96 1302 aa20.91■□□□□ 0.94
LITAF-217ENST00000575426 OVOS2Q6IE36 1432 aa20.91■□□□□ 0.94
LITAF-217ENST00000575426 CCDC7Q96M83 1385 aa20.91■□□□□ 0.94
LITAF-217ENST00000575426 RGPD5Q99666 1765 aa20.91■□□□□ 0.94
LITAF-217ENST00000575426 VPS72Q15906 364 aa20.9■□□□□ 0.94
LITAF-217ENST00000575426 ARHGEF25Q86VW2 580 aa20.9■□□□□ 0.94
LITAF-217ENST00000575426 GJD4Q96KN9 370 aaPredicted RBP20.9■□□□□ 0.94
LITAF-217ENST00000575426 STRN4Q9NRL3 753 aa20.9■□□□□ 0.94
LITAF-217ENST00000575426 NFAT5O94916 1531 aa20.89■□□□□ 0.94
LITAF-217ENST00000575426 AATKQ6ZMQ8 1374 aa20.88■□□□□ 0.93
LITAF-217ENST00000575426 LMO7Q8WWI1 1683 aa20.88■□□□□ 0.93
LITAF-217ENST00000575426 COL18A1P39060 1754 aa20.87■□□□□ 0.93
LITAF-217ENST00000575426 CAMTA1Q9Y6Y1 1673 aa20.87■□□□□ 0.93
LITAF-217ENST00000575426 WASHC2AQ641Q2 1341 aa20.87■□□□□ 0.93
LITAF-217ENST00000575426 KNSTRNQ9Y448 316 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms