RNA–Protein interactions for RNA: ENST00000574781.1

ERCC4-206, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-206ENST00000574781 NHSL1Q5SYE7 1610 aa11.86□□□□□ -0.51
ERCC4-206ENST00000574781 SRCAPQ6ZRS2 3230 aa11.86□□□□□ -0.51
ERCC4-206ENST00000574781 PTCH1Q13635 1447 aa11.86□□□□□ -0.51
ERCC4-206ENST00000574781 TRPC5Q9UL62 973 aaPredicted RBP11.85□□□□□ -0.51
ERCC4-206ENST00000574781 RGS12O14924 1447 aa11.85□□□□□ -0.51
ERCC4-206ENST00000574781 RASEFQ8IZ41 740 aa11.84□□□□□ -0.51
ERCC4-206ENST00000574781 FNBP4Q8N3X1 1017 aaPredicted RBP11.84□□□□□ -0.51
ERCC4-206ENST00000574781 MS4A3Q96HJ5 214 aa11.84□□□□□ -0.51
ERCC4-206ENST00000574781 CCDC144AA2RUR9 1427 aa11.84□□□□□ -0.51
ERCC4-206ENST00000574781 NPHP3Q7Z494 1330 aa11.84□□□□□ -0.51
ERCC4-206ENST00000574781 CDK12Q9NYV4 1490 aaPredicted RBP11.83□□□□□ -0.52
ERCC4-206ENST00000574781 PLEKHH1Q9ULM0 1364 aa11.83□□□□□ -0.52
ERCC4-206ENST00000574781 SAFB2Q14151 953 aaKnown RBP eCLIP11.83□□□□□ -0.52
ERCC4-206ENST00000574781 CCDC61Q9Y6R9 512 aa11.83□□□□□ -0.52
ERCC4-206ENST00000574781 CFAP70Q5T0N1 1121 aa11.81□□□□□ -0.52
ERCC4-206ENST00000574781 LMOD2Q6P5Q4 547 aa11.81□□□□□ -0.52
ERCC4-206ENST00000574781 KRT28Q7Z3Y7 464 aa11.81□□□□□ -0.52
ERCC4-206ENST00000574781 IFNLR1Q8IU57 520 aaPredicted RBP11.81□□□□□ -0.52
ERCC4-206ENST00000574781 LRPPRCP42704 1394 aaKnown RBP11.8□□□□□ -0.52
ERCC4-206ENST00000574781 CABLES1Q8TDN4 633 aa11.8□□□□□ -0.52
ERCC4-206ENST00000574781 ABCC11Q96J66 1382 aa11.79□□□□□ -0.52
ERCC4-206ENST00000574781 ANKRD30BQ9BXX2 1392 aa11.79□□□□□ -0.52
ERCC4-206ENST00000574781 PPLO60437 1756 aa11.79□□□□□ -0.52
ERCC4-206ENST00000574781 SPATA31E1Q6ZUB1 1445 aa11.79□□□□□ -0.52
ERCC4-206ENST00000574781 HAP1P54257 671 aaPredicted RBP11.79□□□□□ -0.52
ERCC4-206ENST00000574781 GJD4Q96KN9 370 aaPredicted RBP11.79□□□□□ -0.52
ERCC4-206ENST00000574781 C14orf93Q9H972 538 aaKnown RBP11.79□□□□□ -0.52
ERCC4-206ENST00000574781 KLHL34Q8N239 644 aa11.78□□□□□ -0.52
ERCC4-206ENST00000574781 PRAM1Q96QH2 718 aa11.78□□□□□ -0.52
ERCC4-206ENST00000574781 TSPYL2Q9H2G4 693 aaPredicted RBP11.78□□□□□ -0.52
ERCC4-206ENST00000574781 ATAD2Q6PL18 1390 aa11.78□□□□□ -0.52
ERCC4-206ENST00000574781 BCL9LQ86UU0 1499 aa11.77□□□□□ -0.52
ERCC4-206ENST00000574781 PXDNQ92626 1479 aa11.77□□□□□ -0.52
ERCC4-206ENST00000574781 PSME1Q06323 249 aa11.77□□□□□ -0.53
ERCC4-206ENST00000574781 PMFBP1Q8TBY8 1022 aa11.77□□□□□ -0.53
ERCC4-206ENST00000574781 FAM212AQ96EL1 285 aa11.77□□□□□ -0.53
ERCC4-206ENST00000574781 POGKQ9P215 609 aa11.77□□□□□ -0.53
ERCC4-206ENST00000574781 PHF8Q9UPP1 1060 aa11.77□□□□□ -0.53
ERCC4-206ENST00000574781 KDM2AQ9Y2K7 1162 aa11.77□□□□□ -0.53
ERCC4-206ENST00000574781 SPATA31A3Q5VYP0 1347 aa11.77□□□□□ -0.53
ERCC4-206ENST00000574781 EP400Q96L91 3159 aa11.77□□□□□ -0.53
ERCC4-206ENST00000574781 ATRNO75882 1429 aa11.77□□□□□ -0.53
ERCC4-206ENST00000574781 PRAG1Q86YV5 1406 aa11.77□□□□□ -0.53
ERCC4-206ENST00000574781 YTHDC2Q9H6S0 1430 aaKnown RBP11.77□□□□□ -0.53
ERCC4-206ENST00000574781 ST18O60284 1047 aa11.76□□□□□ -0.53
ERCC4-206ENST00000574781 UNC5CLQ8IV45 518 aa11.76□□□□□ -0.53
ERCC4-206ENST00000574781 CCDC9Q9Y3X0 531 aaKnown RBP11.76□□□□□ -0.53
ERCC4-206ENST00000574781 MYOM2P54296 1465 aa11.76□□□□□ -0.53
ERCC4-206ENST00000574781 LAMC1P11047 1609 aa11.75□□□□□ -0.53
ERCC4-206ENST00000574781 ATN1P54259 1190 aaPredicted RBP11.75□□□□□ -0.53
ERCC4-206ENST00000574781 SIRT1Q96EB6 747 aa11.75□□□□□ -0.53
ERCC4-206ENST00000574781 HIRIP3Q9BW71 556 aaPredicted RBP11.75□□□□□ -0.53
ERCC4-206ENST00000574781 DHX57Q6P158 1386 aaKnown RBP11.75□□□□□ -0.53
ERCC4-206ENST00000574781 PIK3C2GO75747 1445 aa11.75□□□□□ -0.53
ERCC4-206ENST00000574781 SPOCK2Q92563 424 aa11.74□□□□□ -0.53
ERCC4-206ENST00000574781 TRAK1Q9UPV9 953 aa11.74□□□□□ -0.53
ERCC4-206ENST00000574781 TECPR2O15040 1411 aa11.74□□□□□ -0.53
ERCC4-206ENST00000574781 CDC42BPGQ6DT37 1551 aa11.74□□□□□ -0.53
ERCC4-206ENST00000574781 SEPT12Q8IYM1 358 aa11.72□□□□□ -0.53
ERCC4-206ENST00000574781 DCAF11Q8TEB1 546 aa11.72□□□□□ -0.53
ERCC4-206ENST00000574781 KIF12Q96FN5 646 aa11.72□□□□□ -0.53
ERCC4-206ENST00000574781 SGIP1Q9BQI5 828 aa11.72□□□□□ -0.53
ERCC4-206ENST00000574781 COL22A1Q8NFW1 1626 aaPredicted RBP11.71□□□□□ -0.53
ERCC4-206ENST00000574781 MINK1Q8N4C8 1332 aaPredicted RBP11.71□□□□□ -0.53
ERCC4-206ENST00000574781 FAM83GA6ND36 823 aa11.71□□□□□ -0.53
ERCC4-206ENST00000574781 GSE1Q14687 1217 aa11.71□□□□□ -0.53
ERCC4-206ENST00000574781 CCDC125Q86Z20 511 aa11.71□□□□□ -0.53
ERCC4-206ENST00000574781 A0A0G2JS52 829 aa11.7□□□□□ -0.54
ERCC4-206ENST00000574781 MYT1Q01538 1121 aa11.7□□□□□ -0.54
ERCC4-206ENST00000574781 DEFB132Q7Z7B7 95 aa11.7□□□□□ -0.54
ERCC4-206ENST00000574781 RALGAPBQ86X10 1494 aa11.7□□□□□ -0.54
ERCC4-206ENST00000574781 RAB3GAP2Q9H2M9 1393 aa11.69□□□□□ -0.54
ERCC4-206ENST00000574781 VPS72Q15906 364 aa11.69□□□□□ -0.54
ERCC4-206ENST00000574781 POTEFA5A3E0 1075 aa11.68□□□□□ -0.54
ERCC4-206ENST00000574781 SEC24BO95487 1268 aa11.68□□□□□ -0.54
ERCC4-206ENST00000574781 SLIT2O94813 1529 aa11.68□□□□□ -0.54
ERCC4-206ENST00000574781 IFT172Q9UG01 1749 aa11.68□□□□□ -0.54
ERCC4-206ENST00000574781 ACIN1Q9UKV3 1341 aaKnown RBP11.67□□□□□ -0.54
ERCC4-206ENST00000574781 FMN2Q9NZ56 1722 aa11.67□□□□□ -0.54
ERCC4-206ENST00000574781 SF3B2Q13435 895 aaKnown RBP11.67□□□□□ -0.54
ERCC4-206ENST00000574781 NGDNQ8NEJ9 315 aaKnown RBP11.67□□□□□ -0.54
ERCC4-206ENST00000574781 BTG4Q9NY30 223 aa11.67□□□□□ -0.54
ERCC4-206ENST00000574781 TNS3Q68CZ2 1445 aa11.67□□□□□ -0.54
ERCC4-206ENST00000574781 RGPD8O14715 1765 aaPredicted RBP11.67□□□□□ -0.54
ERCC4-206ENST00000574781 WASLO00401 505 aaPredicted RBP11.66□□□□□ -0.54
ERCC4-206ENST00000574781 FAM98CQ17RN3 349 aaKnown RBP11.66□□□□□ -0.54
ERCC4-206ENST00000574781 FAM182BQ5T319 152 aa11.66□□□□□ -0.54
ERCC4-206ENST00000574781 DCAF8Q5TAQ9 597 aa11.66□□□□□ -0.54
ERCC4-206ENST00000574781 KRT27Q7Z3Y8 459 aa11.66□□□□□ -0.54
ERCC4-206ENST00000574781 SBNO1A3KN83 1393 aa11.66□□□□□ -0.54
ERCC4-206ENST00000574781 PRR36Q9H6K5 1346 aa11.65□□□□□ -0.54
ERCC4-206ENST00000574781 NRXN1Q9ULB1 1477 aa11.65□□□□□ -0.54
ERCC4-206ENST00000574781 ONECUT3O60422 494 aaPredicted RBP11.65□□□□□ -0.54
ERCC4-206ENST00000574781 SLAIN1Q8ND83 568 aa11.65□□□□□ -0.54
ERCC4-206ENST00000574781 ARHGEF10O15013 1369 aa11.65□□□□□ -0.55
ERCC4-206ENST00000574781 GPRASP1Q5JY77 1395 aa11.65□□□□□ -0.55
ERCC4-206ENST00000574781 KNDC1Q76NI1 1749 aa11.64□□□□□ -0.55
ERCC4-206ENST00000574781 MARF1Q9Y4F3 1742 aaKnown RBP11.64□□□□□ -0.55
ERCC4-206ENST00000574781 GLI3P10071 1580 aa11.64□□□□□ -0.55
ERCC4-206ENST00000574781 CHRM1P11229 460 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms