RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 TTC37Q6PGP7 1564 aa17.91■□□□□ 0.46
SMG6-215ENST00000574501 ZSCAN23Q3MJ62 389 aa17.9■□□□□ 0.46
SMG6-215ENST00000574501 MAP7D2Q96T17 732 aa17.9■□□□□ 0.46
SMG6-215ENST00000574501 KANK1Q14678 1352 aa17.9■□□□□ 0.46
SMG6-215ENST00000574501 ARHGAP5Q13017 1502 aa17.9■□□□□ 0.46
SMG6-215ENST00000574501 IBTKQ9P2D0 1353 aaPredicted RBP17.89■□□□□ 0.45
SMG6-215ENST00000574501 SLC12A5Q9H2X9 1139 aa17.89■□□□□ 0.45
SMG6-215ENST00000574501 SPHKAPQ2M3C7 1700 aa17.89■□□□□ 0.45
SMG6-215ENST00000574501 ZNF500O60304 480 aaPredicted RBP17.88■□□□□ 0.45
SMG6-215ENST00000574501 ZNF445P59923 1031 aa17.88■□□□□ 0.45
SMG6-215ENST00000574501 TBC1D9Q6ZT07 1266 aa17.88■□□□□ 0.45
SMG6-215ENST00000574501 DUOX2Q9NRD8 1548 aa17.88■□□□□ 0.45
SMG6-215ENST00000574501 BMP2KLQ5H9B9 411 aa17.88■□□□□ 0.45
SMG6-215ENST00000574501 ANKRD45Q5TZF3 282 aa17.88■□□□□ 0.45
SMG6-215ENST00000574501 PRDM10Q9NQV6 1147 aa17.88■□□□□ 0.45
SMG6-215ENST00000574501 PRIM1P49642 420 aaKnown RBP17.87■□□□□ 0.45
SMG6-215ENST00000574501 HS1BP3Q53T59 392 aa17.87■□□□□ 0.45
SMG6-215ENST00000574501 CLEC17AQ6ZS10 378 aa17.87■□□□□ 0.45
SMG6-215ENST00000574501 CFAP53Q96M91 514 aa17.87■□□□□ 0.45
SMG6-215ENST00000574501 PKP1Q13835 747 aa17.86■□□□□ 0.45
SMG6-215ENST00000574501 RBM27Q9P2N5 1060 aaKnown RBP17.86■□□□□ 0.45
SMG6-215ENST00000574501 PDLIM2Q96JY6 352 aa17.85■□□□□ 0.45
SMG6-215ENST00000574501 LMBRD1Q9NUN5 540 aa17.85■□□□□ 0.45
SMG6-215ENST00000574501 ZBTB7CA1YPR0 619 aa17.84■□□□□ 0.45
SMG6-215ENST00000574501 ADGRF5Q8IZF2 1346 aa17.84■□□□□ 0.45
SMG6-215ENST00000574501 A0A0U1RQG5 324 aaPredicted RBP17.84■□□□□ 0.45
SMG6-215ENST00000574501 ZKSCAN5Q9Y2L8 839 aa17.84■□□□□ 0.45
SMG6-215ENST00000574501 ZNF518AQ6AHZ1 1483 aa17.84■□□□□ 0.45
SMG6-215ENST00000574501 CT47B1P0C2W7 299 aaPredicted RBP17.83■□□□□ 0.45
SMG6-215ENST00000574501 CYB5RLQ6IPT4 315 aa17.83■□□□□ 0.45
SMG6-215ENST00000574501 C1orf115Q9H7X2 142 aa17.83■□□□□ 0.45
SMG6-215ENST00000574501 SLC24A1O60721 1099 aa17.83■□□□□ 0.44
SMG6-215ENST00000574501 STAC3Q96MF2 364 aa17.83■□□□□ 0.44
SMG6-215ENST00000574501 ZHX1Q9UKY1 873 aaPredicted RBP17.83■□□□□ 0.44
SMG6-215ENST00000574501 CLTCL1P53675 1640 aa17.82■□□□□ 0.44
SMG6-215ENST00000574501 DYNC1I1O14576 645 aa17.82■□□□□ 0.44
SMG6-215ENST00000574501 PRPF40AO75400 957 aaKnown RBP17.82■□□□□ 0.44
SMG6-215ENST00000574501 KIF16BQ96L93 1317 aa17.81■□□□□ 0.44
SMG6-215ENST00000574501 SMAP1Q8IYB5 467 aaPredicted RBP17.81■□□□□ 0.44
SMG6-215ENST00000574501 PTPRTO14522 1441 aa17.81■□□□□ 0.44
SMG6-215ENST00000574501 CHAMP1Q96JM3 812 aa17.81■□□□□ 0.44
SMG6-215ENST00000574501 TRPM2O94759 1503 aa17.81■□□□□ 0.44
SMG6-215ENST00000574501 U2SURPO15042 1029 aaKnown RBP17.8■□□□□ 0.44
SMG6-215ENST00000574501 GPT2Q8TD30 523 aa17.8■□□□□ 0.44
SMG6-215ENST00000574501 TRIM35Q9UPQ4 493 aa17.8■□□□□ 0.44
SMG6-215ENST00000574501 CSPP1Q1MSJ5 1256 aa17.79■□□□□ 0.44
SMG6-215ENST00000574501 TMPOP42166 694 aaKnown RBP17.79■□□□□ 0.44
SMG6-215ENST00000574501 TRAK1Q9UPV9 953 aa17.79■□□□□ 0.44
SMG6-215ENST00000574501 RIMBP3CA6NJZ7 1639 aa17.78■□□□□ 0.44
SMG6-215ENST00000574501 RIMBP3BA6NNM3 1639 aa17.78■□□□□ 0.44
SMG6-215ENST00000574501 RIMBP3Q9UFD9 1639 aa17.78■□□□□ 0.44
SMG6-215ENST00000574501 SYCE3A1L190 88 aa17.78■□□□□ 0.44
SMG6-215ENST00000574501 NUCB2P80303 420 aa17.78■□□□□ 0.44
SMG6-215ENST00000574501 SASS6Q6UVJ0 657 aa17.78■□□□□ 0.44
SMG6-215ENST00000574501 JARID2Q92833 1246 aaPredicted RBP17.78■□□□□ 0.44
SMG6-215ENST00000574501 IPO8O15397 1037 aaKnown RBP17.78■□□□□ 0.44
SMG6-215ENST00000574501 MTERF4Q7Z6M4 381 aaKnown RBP17.78■□□□□ 0.44
SMG6-215ENST00000574501 RNF214Q8ND24 703 aa17.78■□□□□ 0.44
SMG6-215ENST00000574501 CFAP74Q9C0B2 1584 aa17.77■□□□□ 0.44
SMG6-215ENST00000574501 NOS1P29475 1434 aa17.77■□□□□ 0.44
SMG6-215ENST00000574501 CD109Q6YHK3 1445 aa17.77■□□□□ 0.43
SMG6-215ENST00000574501 CYP2E1P05181 493 aaPredicted RBP17.77■□□□□ 0.43
SMG6-215ENST00000574501 PPIP5K1Q6PFW1 1433 aa17.76■□□□□ 0.43
SMG6-215ENST00000574501 ZGPATQ8N5A5 531 aaKnown RBP17.76■□□□□ 0.43
SMG6-215ENST00000574501 TMEM63CQ9P1W3 806 aa17.76■□□□□ 0.43
SMG6-215ENST00000574501 NSFL1CQ9UNZ2 370 aaKnown RBP17.76■□□□□ 0.43
SMG6-215ENST00000574501 CCDC39Q9UFE4 941 aa17.76■□□□□ 0.43
SMG6-215ENST00000574501 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.75■□□□□ 0.43
SMG6-215ENST00000574501 CDC45O75419 566 aa17.75■□□□□ 0.43
SMG6-215ENST00000574501 FOXD4L5Q5VV16 416 aaPredicted RBP17.75■□□□□ 0.43
SMG6-215ENST00000574501 FOXD4L4Q8WXT5 416 aaPredicted RBP17.75■□□□□ 0.43
SMG6-215ENST00000574501 ARHGAP31Q2M1Z3 1444 aa17.75■□□□□ 0.43
SMG6-215ENST00000574501 LRSAM1Q6UWE0 723 aa17.74■□□□□ 0.43
SMG6-215ENST00000574501 TSC1Q92574 1164 aa17.74■□□□□ 0.43
SMG6-215ENST00000574501 GCC1Q96CN9 775 aa17.74■□□□□ 0.43
SMG6-215ENST00000574501 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
SMG6-215ENST00000574501 ABCA6Q8N139 1617 aa17.74■□□□□ 0.43
SMG6-215ENST00000574501 RABEP1Q15276 862 aa17.74■□□□□ 0.43
SMG6-215ENST00000574501 GSPT1P15170 499 aaKnown RBP17.73■□□□□ 0.43
SMG6-215ENST00000574501 MCM5P33992 734 aa17.73■□□□□ 0.43
SMG6-215ENST00000574501 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
SMG6-215ENST00000574501 MPNDQ8N594 471 aa17.73■□□□□ 0.43
SMG6-215ENST00000574501 KIAA1210Q9ULL0 1709 aa17.73■□□□□ 0.43
SMG6-215ENST00000574501 ZBTB7BO15156 539 aaPredicted RBP17.73■□□□□ 0.43
SMG6-215ENST00000574501 CCDC94Q9BW85 323 aaPredicted RBP17.73■□□□□ 0.43
SMG6-215ENST00000574501 ABCC11Q96J66 1382 aa17.73■□□□□ 0.43
SMG6-215ENST00000574501 PTMAP06454 111 aaKnown RBP17.72■□□□□ 0.43
SMG6-215ENST00000574501 SIRT2Q8IXJ6 389 aa17.72■□□□□ 0.43
SMG6-215ENST00000574501 ZDHHC9Q9Y397 364 aa17.72■□□□□ 0.43
SMG6-215ENST00000574501 ADGRB2O60241 1585 aa17.72■□□□□ 0.43
SMG6-215ENST00000574501 DNTTIP2Q5QJE6 756 aaKnown RBP17.72■□□□□ 0.43
SMG6-215ENST00000574501 UGGT1Q9NYU2 1555 aa17.71■□□□□ 0.43
SMG6-215ENST00000574501 UHRF1BP1LA0JNW5 1464 aa17.71■□□□□ 0.43
SMG6-215ENST00000574501 MAP3K4Q9Y6R4 1608 aa17.71■□□□□ 0.42
SMG6-215ENST00000574501 DNAJC5Q9H3Z4 198 aa17.7■□□□□ 0.42
SMG6-215ENST00000574501 DMTNQ08495 405 aa17.7■□□□□ 0.42
SMG6-215ENST00000574501 TRAPPC8Q9Y2L5 1435 aa17.69■□□□□ 0.42
SMG6-215ENST00000574501 NPM1P06748 294 aaKnown RBP eCLIP17.69■□□□□ 0.42
SMG6-215ENST00000574501 ZSCAN20P17040 1043 aaPredicted RBP17.69■□□□□ 0.42
SMG6-215ENST00000574501 TMEM132EQ6IEE7 984 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 281.9 ms