RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 NUTM2AQ8IVF1 878 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC1-206ENST00000573989 TERF2IPQ9NYB0 399 aa17.78■□□□□ 0.44
TRAPPC1-206ENST00000573989 PHF23Q9BUL5 403 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC1-206ENST00000573989 USP6P35125 1406 aa17.77■□□□□ 0.44
TRAPPC1-206ENST00000573989 HAP1P54257 671 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC1-206ENST00000573989 KTN1Q86UP2 1357 aaKnown RBP17.76■□□□□ 0.43
TRAPPC1-206ENST00000573989 CPSF1Q10570 1443 aaKnown RBP17.75■□□□□ 0.43
TRAPPC1-206ENST00000573989 SLC12A5Q9H2X9 1139 aa17.75■□□□□ 0.43
TRAPPC1-206ENST00000573989 ABTB2Q8N961 1025 aa17.74■□□□□ 0.43
TRAPPC1-206ENST00000573989 MON2Q7Z3U7 1717 aa17.74■□□□□ 0.43
TRAPPC1-206ENST00000573989 LRP6O75581 1613 aa17.72■□□□□ 0.43
TRAPPC1-206ENST00000573989 MARF1Q9Y4F3 1742 aaKnown RBP17.72■□□□□ 0.43
TRAPPC1-206ENST00000573989 TTC21AQ8NDW8 1320 aa17.72■□□□□ 0.43
TRAPPC1-206ENST00000573989 NLRP13Q86W25 1043 aa17.71■□□□□ 0.43
TRAPPC1-206ENST00000573989 POLR3GLQ9BT43 218 aa17.71■□□□□ 0.43
TRAPPC1-206ENST00000573989 ABCA3Q99758 1704 aa17.7■□□□□ 0.42
TRAPPC1-206ENST00000573989 ADAMTS2O95450 1211 aa17.7■□□□□ 0.42
TRAPPC1-206ENST00000573989 TTC21BQ7Z4L5 1316 aa17.7■□□□□ 0.42
TRAPPC1-206ENST00000573989 CD163L1Q9NR16 1453 aa17.69■□□□□ 0.42
TRAPPC1-206ENST00000573989 A0A1W2PP64 1363 aa17.69■□□□□ 0.42
TRAPPC1-206ENST00000573989 ANKRD36BQ8N2N9 1353 aa17.69■□□□□ 0.42
TRAPPC1-206ENST00000573989 PLEKHG5O94827 1062 aa17.69■□□□□ 0.42
TRAPPC1-206ENST00000573989 EDC4Q6P2E9 1401 aaKnown RBP17.69■□□□□ 0.42
TRAPPC1-206ENST00000573989 NRKQ7Z2Y5 1582 aa17.69■□□□□ 0.42
TRAPPC1-206ENST00000573989 NLRP6P59044 892 aa17.68■□□□□ 0.42
TRAPPC1-206ENST00000573989 SSH2Q76I76 1423 aa17.68■□□□□ 0.42
TRAPPC1-206ENST00000573989 CABLES1Q8TDN4 633 aa17.68■□□□□ 0.42
TRAPPC1-206ENST00000573989 MYOM1P52179 1685 aa17.67■□□□□ 0.42
TRAPPC1-206ENST00000573989 NUTM2GQ5VZR2 741 aa17.67■□□□□ 0.42
TRAPPC1-206ENST00000573989 NGLY1Q96IV0 654 aa17.67■□□□□ 0.42
TRAPPC1-206ENST00000573989 C8orf37Q96NL8 207 aa17.67■□□□□ 0.42
TRAPPC1-206ENST00000573989 CRYBG1Q9Y4K1 1723 aa17.67■□□□□ 0.42
TRAPPC1-206ENST00000573989 ZNF772Q68DY9 489 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC1-206ENST00000573989 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.66■□□□□ 0.42
TRAPPC1-206ENST00000573989 PIK3C2AO00443 1686 aa17.66■□□□□ 0.42
TRAPPC1-206ENST00000573989 PHRF1Q9P1Y6 1649 aaKnown RBP17.65■□□□□ 0.42
TRAPPC1-206ENST00000573989 USP19O94966 1318 aa17.63■□□□□ 0.41
TRAPPC1-206ENST00000573989 AFF2P51816 1311 aa17.63■□□□□ 0.41
TRAPPC1-206ENST00000573989 KCNH5Q8NCM2 988 aa17.62■□□□□ 0.41
TRAPPC1-206ENST00000573989 USP54Q70EL1 1684 aa17.61■□□□□ 0.41
TRAPPC1-206ENST00000573989 C11orf95C9JLR9 678 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC1-206ENST00000573989 GCP02774 474 aa17.6■□□□□ 0.41
TRAPPC1-206ENST00000573989 FNBP4Q8N3X1 1017 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC1-206ENST00000573989 PRDM11Q9NQV5 511 aa17.6■□□□□ 0.41
TRAPPC1-206ENST00000573989 USP21Q9UK80 565 aa17.6■□□□□ 0.41
TRAPPC1-206ENST00000573989 KIF7Q2M1P5 1343 aa17.6■□□□□ 0.41
TRAPPC1-206ENST00000573989 USP31Q70CQ4 1352 aa17.6■□□□□ 0.41
TRAPPC1-206ENST00000573989 COL14A1Q05707 1796 aaKnown RBP17.6■□□□□ 0.41
TRAPPC1-206ENST00000573989 KIF20BQ96Q89 1820 aa17.59■□□□□ 0.41
TRAPPC1-206ENST00000573989 NWD2Q9ULI1 1742 aa17.59■□□□□ 0.41
TRAPPC1-206ENST00000573989 SLIT3O75094 1523 aa17.59■□□□□ 0.41
TRAPPC1-206ENST00000573989 NME9Q86XW9 330 aa17.59■□□□□ 0.41
TRAPPC1-206ENST00000573989 PLCH1Q4KWH8 1693 aa17.58■□□□□ 0.41
TRAPPC1-206ENST00000573989 ZC3H6P61129 1189 aaKnown RBP17.58■□□□□ 0.4
TRAPPC1-206ENST00000573989 COG3Q96JB2 828 aa17.58■□□□□ 0.4
TRAPPC1-206ENST00000573989 NSD3Q9BZ95 1437 aa17.57■□□□□ 0.4
TRAPPC1-206ENST00000573989 KIAA0232Q92628 1395 aa17.57■□□□□ 0.4
TRAPPC1-206ENST00000573989 RGS17Q9UGC6 210 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC1-206ENST00000573989 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.57■□□□□ 0.4
TRAPPC1-206ENST00000573989 CPDO75976 1380 aa17.56■□□□□ 0.4
TRAPPC1-206ENST00000573989 CCDC7Q96M83 1385 aa17.56■□□□□ 0.4
TRAPPC1-206ENST00000573989 CGNL1Q0VF96 1302 aa17.56■□□□□ 0.4
TRAPPC1-206ENST00000573989 FAM83GA6ND36 823 aa17.56■□□□□ 0.4
TRAPPC1-206ENST00000573989 PANK3Q9H999 370 aa17.56■□□□□ 0.4
TRAPPC1-206ENST00000573989 SLIT2O94813 1529 aa17.56■□□□□ 0.4
TRAPPC1-206ENST00000573989 UNC5CLQ8IV45 518 aa17.55■□□□□ 0.4
TRAPPC1-206ENST00000573989 QTRT2Q9H974 415 aaKnown RBP17.55■□□□□ 0.4
TRAPPC1-206ENST00000573989 TRPC5Q9UL62 973 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC1-206ENST00000573989 OVOS2A0A0J9YW53 1432 aa17.55■□□□□ 0.4
TRAPPC1-206ENST00000573989 OVOS2Q6IE36 1432 aa17.55■□□□□ 0.4
TRAPPC1-206ENST00000573989 FYB1O15117 783 aa17.54■□□□□ 0.4
TRAPPC1-206ENST00000573989 CARD14Q9BXL6 1004 aa17.54■□□□□ 0.4
TRAPPC1-206ENST00000573989 BTG4Q9NY30 223 aa17.54■□□□□ 0.4
TRAPPC1-206ENST00000573989 WASHC2AQ641Q2 1341 aa17.53■□□□□ 0.4
TRAPPC1-206ENST00000573989 ZBTB7CA1YPR0 619 aa17.53■□□□□ 0.4
TRAPPC1-206ENST00000573989 SOX12O15370 315 aa17.53■□□□□ 0.4
TRAPPC1-206ENST00000573989 ZRANB1Q9UGI0 708 aa17.53■□□□□ 0.4
TRAPPC1-206ENST00000573989 KNSTRNQ9Y448 316 aa17.53■□□□□ 0.4
TRAPPC1-206ENST00000573989 BCL9LQ86UU0 1499 aa17.52■□□□□ 0.4
TRAPPC1-206ENST00000573989 CHRNA2Q15822 529 aa17.52■□□□□ 0.4
TRAPPC1-206ENST00000573989 POTEAQ6S8J7 498 aa17.52■□□□□ 0.4
TRAPPC1-206ENST00000573989 GGNBP2Q9H3C7 697 aa17.52■□□□□ 0.4
TRAPPC1-206ENST00000573989 LTN1O94822 1766 aa17.51■□□□□ 0.39
TRAPPC1-206ENST00000573989 RXRBP28702 533 aa17.51■□□□□ 0.39
TRAPPC1-206ENST00000573989 NFAT5O94916 1531 aa17.51■□□□□ 0.39
TRAPPC1-206ENST00000573989 ATRNO75882 1429 aa17.5■□□□□ 0.39
TRAPPC1-206ENST00000573989 EVA1CP58658 441 aa17.5■□□□□ 0.39
TRAPPC1-206ENST00000573989 RBM6P78332 1123 aaKnown RBP17.5■□□□□ 0.39
TRAPPC1-206ENST00000573989 ARHGEF25Q86VW2 580 aa17.5■□□□□ 0.39
TRAPPC1-206ENST00000573989 AATKQ6ZMQ8 1374 aa17.5■□□□□ 0.39
TRAPPC1-206ENST00000573989 NRAPQ86VF7 1730 aa17.5■□□□□ 0.39
TRAPPC1-206ENST00000573989 ANKRD26Q9UPS8 1709 aa17.5■□□□□ 0.39
TRAPPC1-206ENST00000573989 ABCC6O95255 1503 aa17.49■□□□□ 0.39
TRAPPC1-206ENST00000573989 CCDC9Q9Y3X0 531 aaKnown RBP17.49■□□□□ 0.39
TRAPPC1-206ENST00000573989 NSD2O96028 1365 aa17.49■□□□□ 0.39
TRAPPC1-206ENST00000573989 LMO7Q8WWI1 1683 aa17.48■□□□□ 0.39
TRAPPC1-206ENST00000573989 VPS72Q15906 364 aa17.48■□□□□ 0.39
TRAPPC1-206ENST00000573989 GJD4Q96KN9 370 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC1-206ENST00000573989 COL18A1P39060 1754 aa17.46■□□□□ 0.39
TRAPPC1-206ENST00000573989 STRN4Q9NRL3 753 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms