RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 PAK3O75914 559 aaPredicted RBP17.73■□□□□ 0.43
CCDC40-210ENST00000573903 FAM83GA6ND36 823 aa17.72■□□□□ 0.43
CCDC40-210ENST00000573903 KIAA1210Q9ULL0 1709 aa17.72■□□□□ 0.43
CCDC40-210ENST00000573903 ATP7BP35670 1465 aa17.71■□□□□ 0.43
CCDC40-210ENST00000573903 KRT27Q7Z3Y8 459 aa17.71■□□□□ 0.43
CCDC40-210ENST00000573903 BTG4Q9NY30 223 aa17.71■□□□□ 0.43
CCDC40-210ENST00000573903 CRYBG1Q9Y4K1 1723 aa17.7■□□□□ 0.42
CCDC40-210ENST00000573903 ONECUT3O60422 494 aaPredicted RBP17.69■□□□□ 0.42
CCDC40-210ENST00000573903 NUDT16Q96DE0 195 aaKnown RBP17.69■□□□□ 0.42
CCDC40-210ENST00000573903 PRDM11Q9NQV5 511 aa17.68■□□□□ 0.42
CCDC40-210ENST00000573903 FAM98CQ17RN3 349 aaKnown RBP17.67■□□□□ 0.42
CCDC40-210ENST00000573903 TOPAZ1Q8N9V7 1692 aa17.67■□□□□ 0.42
CCDC40-210ENST00000573903 PHRF1Q9P1Y6 1649 aaKnown RBP17.66■□□□□ 0.42
CCDC40-210ENST00000573903 CDK19Q9BWU1 502 aa17.65■□□□□ 0.42
CCDC40-210ENST00000573903 DEFB132Q7Z7B7 95 aa17.64■□□□□ 0.41
CCDC40-210ENST00000573903 BAG6P46379 1132 aa17.63■□□□□ 0.41
CCDC40-210ENST00000573903 CCDC61Q9Y6R9 512 aa17.63■□□□□ 0.41
CCDC40-210ENST00000573903 SPATA31A5Q5VU36 1347 aa17.63■□□□□ 0.41
CCDC40-210ENST00000573903 SPATA31A7Q8IWB4 1347 aa17.63■□□□□ 0.41
CCDC40-210ENST00000573903 RGPD1P0DJD0 1748 aa17.62■□□□□ 0.41
CCDC40-210ENST00000573903 POLR3AO14802 1390 aaPredicted RBP17.62■□□□□ 0.41
CCDC40-210ENST00000573903 KIAA0232Q92628 1395 aa17.62■□□□□ 0.41
CCDC40-210ENST00000573903 ACEP12821 1306 aa17.61■□□□□ 0.41
CCDC40-210ENST00000573903 THSD7AQ9UPZ6 1657 aa17.61■□□□□ 0.41
CCDC40-210ENST00000573903 SRPK2P78362 688 aaKnown RBP17.6■□□□□ 0.41
CCDC40-210ENST00000573903 CENPJQ9HC77 1338 aaPredicted RBP17.59■□□□□ 0.41
CCDC40-210ENST00000573903 NBPF8Q3BBV2 869 aa17.59■□□□□ 0.41
CCDC40-210ENST00000573903 NUTM2GQ5VZR2 741 aa17.59■□□□□ 0.41
CCDC40-210ENST00000573903 STRN4Q9NRL3 753 aa17.59■□□□□ 0.41
CCDC40-210ENST00000573903 QRICH2Q9H0J4 1663 aa17.58■□□□□ 0.41
CCDC40-210ENST00000573903 NRKQ7Z2Y5 1582 aa17.58■□□□□ 0.41
CCDC40-210ENST00000573903 PLEKHG3A1L390 1219 aa17.58■□□□□ 0.4
CCDC40-210ENST00000573903 ZC3H6P61129 1189 aaKnown RBP17.58■□□□□ 0.4
CCDC40-210ENST00000573903 CHRNA2Q15822 529 aa17.58■□□□□ 0.4
CCDC40-210ENST00000573903 PPIP5K1Q6PFW1 1433 aa17.57■□□□□ 0.4
CCDC40-210ENST00000573903 NBPF1Q3BBV0 1214 aa17.57■□□□□ 0.4
CCDC40-210ENST00000573903 ABTB2Q8N961 1025 aa17.57■□□□□ 0.4
CCDC40-210ENST00000573903 SPATA31A1Q5TZJ5 1347 aa17.56■□□□□ 0.4
CCDC40-210ENST00000573903 EVA1CP58658 441 aa17.56■□□□□ 0.4
CCDC40-210ENST00000573903 FAM182BQ5T319 152 aa17.54■□□□□ 0.4
CCDC40-210ENST00000573903 NLRP13Q86W25 1043 aa17.54■□□□□ 0.4
CCDC40-210ENST00000573903 SSH2Q76I76 1423 aa17.54■□□□□ 0.4
CCDC40-210ENST00000573903 BRD4O60885 1362 aaPredicted RBP17.53■□□□□ 0.4
CCDC40-210ENST00000573903 TNS1Q9HBL0 1735 aaKnown RBP17.53■□□□□ 0.4
CCDC40-210ENST00000573903 USP35Q9P2H5 1018 aa17.53■□□□□ 0.4
CCDC40-210ENST00000573903 LRP5O75197 1615 aa17.53■□□□□ 0.4
CCDC40-210ENST00000573903 USP19O94966 1318 aa17.52■□□□□ 0.4
CCDC40-210ENST00000573903 CABP2Q9NPB3 220 aa17.52■□□□□ 0.4
CCDC40-210ENST00000573903 CPDO75976 1380 aa17.52■□□□□ 0.39
CCDC40-210ENST00000573903 EN1Q05925 392 aaPredicted RBP17.51■□□□□ 0.39
CCDC40-210ENST00000573903 FAM196AQ6ZSG2 479 aa17.51■□□□□ 0.39
CCDC40-210ENST00000573903 LMO7Q8WWI1 1683 aa17.51■□□□□ 0.39
CCDC40-210ENST00000573903 SRCAPQ6ZRS2 3230 aa17.51■□□□□ 0.39
CCDC40-210ENST00000573903 TRPM1Q7Z4N2 1603 aa17.5■□□□□ 0.39
CCDC40-210ENST00000573903 DISP2A7MBM2 1401 aa17.5■□□□□ 0.39
CCDC40-210ENST00000573903 PDE3BQ13370 1112 aa17.5■□□□□ 0.39
CCDC40-210ENST00000573903 BARGINQ6ZT62 677 aa17.5■□□□□ 0.39
CCDC40-210ENST00000573903 CAMTA1Q9Y6Y1 1673 aa17.5■□□□□ 0.39
CCDC40-210ENST00000573903 PSDA5PKW4 1024 aaPredicted RBP17.49■□□□□ 0.39
CCDC40-210ENST00000573903 L3MBTL2Q969R5 705 aa17.49■□□□□ 0.39
CCDC40-210ENST00000573903 EVC2Q86UK5 1308 aa17.48■□□□□ 0.39
CCDC40-210ENST00000573903 USP6P35125 1406 aa17.48■□□□□ 0.39
CCDC40-210ENST00000573903 GCP02774 474 aa17.48■□□□□ 0.39
CCDC40-210ENST00000573903 TCP11L2Q8N4U5 519 aa17.48■□□□□ 0.39
CCDC40-210ENST00000573903 ZBTB7CA1YPR0 619 aa17.47■□□□□ 0.39
CCDC40-210ENST00000573903 TRIM37O94972 964 aa17.47■□□□□ 0.39
CCDC40-210ENST00000573903 LARP1Q6PKG0 1096 aaKnown RBP17.47■□□□□ 0.39
CCDC40-210ENST00000573903 CABP1Q9NZU7 370 aa17.47■□□□□ 0.39
CCDC40-210ENST00000573903 THRAP3Q9Y2W1 955 aaKnown RBP17.47■□□□□ 0.39
CCDC40-210ENST00000573903 ROCK2O75116 1388 aaKnown RBP17.47■□□□□ 0.39
CCDC40-210ENST00000573903 NLRP6P59044 892 aa17.46■□□□□ 0.39
CCDC40-210ENST00000573903 COL5A2P05997 1499 aaPredicted RBP17.45■□□□□ 0.38
CCDC40-210ENST00000573903 PARD3Q8TEW0 1356 aa17.45■□□□□ 0.38
CCDC40-210ENST00000573903 PARP4Q9UKK3 1724 aaKnown RBP17.44■□□□□ 0.38
CCDC40-210ENST00000573903 SLIT3O75094 1523 aa17.44■□□□□ 0.38
CCDC40-210ENST00000573903 APBA3O96018 575 aa17.44■□□□□ 0.38
CCDC40-210ENST00000573903 EZH2Q15910 746 aaKnown RBP17.44■□□□□ 0.38
CCDC40-210ENST00000573903 CRB1P82279 1406 aa17.44■□□□□ 0.38
CCDC40-210ENST00000573903 PIK3C2AO00443 1686 aa17.43■□□□□ 0.38
CCDC40-210ENST00000573903 NEUROD1Q13562 356 aa17.43■□□□□ 0.38
CCDC40-210ENST00000573903 R3HDM1Q15032 1099 aaKnown RBP17.43■□□□□ 0.38
CCDC40-210ENST00000573903 SIN3AQ96ST3 1273 aa17.43■□□□□ 0.38
CCDC40-210ENST00000573903 C11orf95C9JLR9 678 aaPredicted RBP17.42■□□□□ 0.38
CCDC40-210ENST00000573903 AKAP12Q02952 1782 aa17.42■□□□□ 0.38
CCDC40-210ENST00000573903 AATKQ6ZMQ8 1374 aa17.41■□□□□ 0.38
CCDC40-210ENST00000573903 ZNF692Q9BU19 519 aaPredicted RBP17.41■□□□□ 0.38
CCDC40-210ENST00000573903 RREB1Q92766 1687 aa17.4■□□□□ 0.38
CCDC40-210ENST00000573903 CAMKK2Q96RR4 588 aa17.4■□□□□ 0.38
CCDC40-210ENST00000573903 TOM1L2Q6ZVM7 507 aa17.39■□□□□ 0.37
CCDC40-210ENST00000573903 OVOS2A0A0G2JMS6 1433 aa17.38■□□□□ 0.37
CCDC40-210ENST00000573903 OVOS2A0A0J9YW53 1432 aa17.38■□□□□ 0.37
CCDC40-210ENST00000573903 OVOS2Q6IE36 1432 aa17.38■□□□□ 0.37
CCDC40-210ENST00000573903 KCNH5Q8NCM2 988 aa17.38■□□□□ 0.37
CCDC40-210ENST00000573903 LRRC37A3O60309 1634 aa17.38■□□□□ 0.37
CCDC40-210ENST00000573903 TTC21AQ8NDW8 1320 aa17.38■□□□□ 0.37
CCDC40-210ENST00000573903 NUP188Q5SRE5 1749 aa17.38■□□□□ 0.37
CCDC40-210ENST00000573903 CPSF1Q10570 1443 aaKnown RBP17.38■□□□□ 0.37
CCDC40-210ENST00000573903 WNK3Q9BYP7 1800 aa17.37■□□□□ 0.37
CCDC40-210ENST00000573903 NBPF14Q5TI25 921 aa17.37■□□□□ 0.37
CCDC40-210ENST00000573903 TTC21BQ7Z4L5 1316 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms