RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 TTC21BQ7Z4L5 1316 aa18.22■□□□□ 0.51
TVP23A-207ENST00000573360 DMRT2Q9Y5R5 561 aa18.22■□□□□ 0.51
TVP23A-207ENST00000573360 ZNF692Q9BU19 519 aaPredicted RBP18.22■□□□□ 0.51
TVP23A-207ENST00000573360 PHF8Q9UPP1 1060 aa18.22■□□□□ 0.51
TVP23A-207ENST00000573360 CEP170BQ9Y4F5 1589 aaPredicted RBP18.22■□□□□ 0.51
TVP23A-207ENST00000573360 GOLGA2Q08379 1002 aa18.21■□□□□ 0.51
TVP23A-207ENST00000573360 ATF3P18847 181 aa18.21■□□□□ 0.51
TVP23A-207ENST00000573360 BCL2L13Q9BXK5 485 aa18.21■□□□□ 0.51
TVP23A-207ENST00000573360 RCAN3Q9UKA8 241 aa18.21■□□□□ 0.51
TVP23A-207ENST00000573360 PUS7Q96PZ0 661 aaKnown RBP18.21■□□□□ 0.51
TVP23A-207ENST00000573360 SPINK5Q9NQ38 1064 aaPredicted RBP18.2■□□□□ 0.5
TVP23A-207ENST00000573360 PRKAR2BP31323 418 aa18.2■□□□□ 0.5
TVP23A-207ENST00000573360 HSP90AB2PQ58FF8 381 aa18.2■□□□□ 0.5
TVP23A-207ENST00000573360 ERICH6BQ5W0A0 696 aa18.19■□□□□ 0.5
TVP23A-207ENST00000573360 NPHP4O75161 1426 aaPredicted RBP18.19■□□□□ 0.5
TVP23A-207ENST00000573360 NBR1Q14596 966 aa18.19■□□□□ 0.5
TVP23A-207ENST00000573360 THUMPD2Q9BTF0 503 aaKnown RBP18.19■□□□□ 0.5
TVP23A-207ENST00000573360 CANXP27824 592 aaKnown RBP18.18■□□□□ 0.5
TVP23A-207ENST00000573360 MYOM1P52179 1685 aa18.18■□□□□ 0.5
TVP23A-207ENST00000573360 RUNDC1Q96C34 613 aa18.18■□□□□ 0.5
TVP23A-207ENST00000573360 NRXN3Q9Y4C0 1643 aa18.17■□□□□ 0.5
TVP23A-207ENST00000573360 FRAT1Q92837 279 aaPredicted RBP18.17■□□□□ 0.5
TVP23A-207ENST00000573360 FAM135BQ49AJ0 1406 aa18.16■□□□□ 0.5
TVP23A-207ENST00000573360 NPC1L1Q9UHC9 1359 aa18.16■□□□□ 0.5
TVP23A-207ENST00000573360 MYO3AQ8NEV4 1616 aa18.16■□□□□ 0.5
TVP23A-207ENST00000573360 ELL2O00472 640 aaPredicted RBP18.16■□□□□ 0.5
TVP23A-207ENST00000573360 RIPK4P57078 832 aa18.16■□□□□ 0.5
TVP23A-207ENST00000573360 NPM2Q86SE8 214 aaKnown RBP18.16■□□□□ 0.5
TVP23A-207ENST00000573360 SIRT1Q96EB6 747 aa18.16■□□□□ 0.5
TVP23A-207ENST00000573360 NINLQ9Y2I6 1382 aa18.15■□□□□ 0.5
TVP23A-207ENST00000573360 AEBP1Q8IUX7 1158 aa18.15■□□□□ 0.5
TVP23A-207ENST00000573360 TSR2Q969E8 191 aaKnown RBP18.15■□□□□ 0.5
TVP23A-207ENST00000573360 SULT6B1Q6IMI4 303 aa18.14■□□□□ 0.5
TVP23A-207ENST00000573360 FANCIQ9NVI1 1328 aa18.14■□□□□ 0.5
TVP23A-207ENST00000573360 BCL11AQ9H165 835 aa18.14■□□□□ 0.49
TVP23A-207ENST00000573360 CD163L1Q9NR16 1453 aa18.13■□□□□ 0.49
TVP23A-207ENST00000573360 USHBP1Q8N6Y0 703 aa18.13■□□□□ 0.49
TVP23A-207ENST00000573360 ARHGAP23Q9P227 1491 aa18.13■□□□□ 0.49
TVP23A-207ENST00000573360 TCERG1O14776 1098 aaKnown RBP18.13■□□□□ 0.49
TVP23A-207ENST00000573360 ZC3H6P61129 1189 aaKnown RBP18.13■□□□□ 0.49
TVP23A-207ENST00000573360 SETD1BQ9UPS6 1966 aaKnown RBP18.13■□□□□ 0.49
TVP23A-207ENST00000573360 ZNF335Q9H4Z2 1342 aaPredicted RBP18.13■□□□□ 0.49
TVP23A-207ENST00000573360 DCTN1Q14203 1278 aa18.13■□□□□ 0.49
TVP23A-207ENST00000573360 CABLES1Q8TDN4 633 aa18.13■□□□□ 0.49
TVP23A-207ENST00000573360 WWC1Q8IX03 1113 aa18.12■□□□□ 0.49
TVP23A-207ENST00000573360 HAP1P54257 671 aaPredicted RBP18.12■□□□□ 0.49
TVP23A-207ENST00000573360 PLEKHG3A1L390 1219 aa18.12■□□□□ 0.49
TVP23A-207ENST00000573360 PHACTR3Q96KR7 559 aa18.11■□□□□ 0.49
TVP23A-207ENST00000573360 SLIT1O75093 1534 aa18.11■□□□□ 0.49
TVP23A-207ENST00000573360 POLR3AO14802 1390 aaPredicted RBP18.11■□□□□ 0.49
TVP23A-207ENST00000573360 ATP7BP35670 1465 aa18.1■□□□□ 0.49
TVP23A-207ENST00000573360 EDC4Q6P2E9 1401 aaKnown RBP18.1■□□□□ 0.49
TVP23A-207ENST00000573360 NSD2O96028 1365 aa18.1■□□□□ 0.49
TVP23A-207ENST00000573360 TMEM94Q12767 1356 aa18.1■□□□□ 0.49
TVP23A-207ENST00000573360 ANP32AP39687 249 aaKnown RBP18.09■□□□□ 0.49
TVP23A-207ENST00000573360 FAM83GA6ND36 823 aa18.09■□□□□ 0.49
TVP23A-207ENST00000573360 BCAR3O75815 825 aa18.09■□□□□ 0.49
TVP23A-207ENST00000573360 CLUAP1Q96AJ1 413 aa18.09■□□□□ 0.49
TVP23A-207ENST00000573360 C19orf44Q9H6X5 657 aa18.09■□□□□ 0.49
TVP23A-207ENST00000573360 CPS1P31327 1500 aa18.09■□□□□ 0.49
TVP23A-207ENST00000573360 EXOC6Q8TAG9 804 aa18.08■□□□□ 0.49
TVP23A-207ENST00000573360 TECPR2O15040 1411 aa18.08■□□□□ 0.49
TVP23A-207ENST00000573360 MAP3K19Q56UN5 1328 aa18.08■□□□□ 0.49
TVP23A-207ENST00000573360 PDE3BQ13370 1112 aa18.08■□□□□ 0.48
TVP23A-207ENST00000573360 TMPOP42166 694 aaKnown RBP18.07■□□□□ 0.48
TVP23A-207ENST00000573360 KRT28Q7Z3Y7 464 aa18.07■□□□□ 0.48
TVP23A-207ENST00000573360 DLC1Q96QB1 1528 aa18.07■□□□□ 0.48
TVP23A-207ENST00000573360 EIF4A2Q14240 407 aaKnown RBP18.06■□□□□ 0.48
TVP23A-207ENST00000573360 DUSP27Q5VZP5 1158 aa18.06■□□□□ 0.48
TVP23A-207ENST00000573360 C20orf194Q5TEA3 1177 aa18.06■□□□□ 0.48
TVP23A-207ENST00000573360 SMG6Q86US8 1419 aaKnown RBP18.06■□□□□ 0.48
TVP23A-207ENST00000573360 RRP1P56182 461 aaKnown RBP18.05■□□□□ 0.48
TVP23A-207ENST00000573360 MED14O60244 1454 aa18.05■□□□□ 0.48
TVP23A-207ENST00000573360 ADAMTSL3P82987 1691 aa18.05■□□□□ 0.48
TVP23A-207ENST00000573360 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.05■□□□□ 0.48
TVP23A-207ENST00000573360 USP6P35125 1406 aa18.04■□□□□ 0.48
TVP23A-207ENST00000573360 NKTRP30414 1462 aaKnown RBP18.04■□□□□ 0.48
TVP23A-207ENST00000573360 CPSF1Q10570 1443 aaKnown RBP18.04■□□□□ 0.48
TVP23A-207ENST00000573360 SLFN5Q08AF3 891 aa18.04■□□□□ 0.48
TVP23A-207ENST00000573360 NOP58Q9Y2X3 529 aaKnown RBP18.04■□□□□ 0.48
TVP23A-207ENST00000573360 E9PSI1 815 aa18.03■□□□□ 0.48
TVP23A-207ENST00000573360 CHRNA2Q15822 529 aa18.02■□□□□ 0.48
TVP23A-207ENST00000573360 MIS18AQ9NYP9 233 aa18.02■□□□□ 0.48
TVP23A-207ENST00000573360 BLMP54132 1417 aaPredicted RBP18.02■□□□□ 0.47
TVP23A-207ENST00000573360 CSB-PGBD3P0DP91 1061 aa18.01■□□□□ 0.47
TVP23A-207ENST00000573360 IL13P35225 146 aa18.01■□□□□ 0.47
TVP23A-207ENST00000573360 MCM10Q7L590 875 aa18.01■□□□□ 0.47
TVP23A-207ENST00000573360 LRRC59Q96AG4 307 aaKnown RBP18.01■□□□□ 0.47
TVP23A-207ENST00000573360 CRBNQ96SW2 442 aa18■□□□□ 0.47
TVP23A-207ENST00000573360 ZBTB47Q9UFB7 747 aaPredicted RBP18■□□□□ 0.47
TVP23A-207ENST00000573360 PTCH1Q13635 1447 aa18■□□□□ 0.47
TVP23A-207ENST00000573360 SETD1AO15047 1707 aaKnown RBP18■□□□□ 0.47
TVP23A-207ENST00000573360 EXOSC9Q06265 439 aaKnown RBP18■□□□□ 0.47
TVP23A-207ENST00000573360 FCHSD2O94868 740 aa17.99■□□□□ 0.47
TVP23A-207ENST00000573360 PIK3R4Q99570 1358 aa17.99■□□□□ 0.47
TVP23A-207ENST00000573360 RSPH6AQ9H0K4 717 aa17.99■□□□□ 0.47
TVP23A-207ENST00000573360 DIP2AQ14689 1571 aa17.98■□□□□ 0.47
TVP23A-207ENST00000573360 RTL5Q5HYW3 569 aaPredicted RBP17.98■□□□□ 0.47
TVP23A-207ENST00000573360 PNNQ9H307 717 aaKnown RBP17.98■□□□□ 0.47
TVP23A-207ENST00000573360 CADPS2Q86UW7 1296 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms