RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 HSP90AB3PQ58FF7 597 aa13.06□□□□□ -0.32
CHRNB1-205ENST00000573209 PPP1R9BQ96SB3 815 aa13.06□□□□□ -0.32
CHRNB1-205ENST00000573209 NINLQ9Y2I6 1382 aa13.06□□□□□ -0.32
CHRNB1-205ENST00000573209 TRIM6-TRIM34B2RNG4 842 aa13.06□□□□□ -0.32
CHRNB1-205ENST00000573209 RGL3Q3MIN7 710 aa13.06□□□□□ -0.32
CHRNB1-205ENST00000573209 BANK1Q8NDB2 785 aa13.06□□□□□ -0.32
CHRNB1-205ENST00000573209 TRIM34Q9BYJ4 488 aa13.06□□□□□ -0.32
CHRNB1-205ENST00000573209 PLCH2O75038 1416 aa13.06□□□□□ -0.32
CHRNB1-205ENST00000573209 SENP3-EIF4A1A0A087X0R7 540 aa13.05□□□□□ -0.32
CHRNB1-205ENST00000573209 SCAPERQ9BY12 1400 aa13.05□□□□□ -0.32
CHRNB1-205ENST00000573209 PANK3Q9H999 370 aa13.05□□□□□ -0.32
CHRNB1-205ENST00000573209 CHMP4CQ96CF2 233 aa13.05□□□□□ -0.32
CHRNB1-205ENST00000573209 ASXL1Q8IXJ9 1541 aa13.04□□□□□ -0.32
CHRNB1-205ENST00000573209 CLTCL1P53675 1640 aa13.04□□□□□ -0.32
CHRNB1-205ENST00000573209 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHRNB1-205ENST00000573209 VIRMAQ69YN4 1812 aaKnown RBP13.04□□□□□ -0.32
CHRNB1-205ENST00000573209 FAM161AQ3B820 660 aa13.03□□□□□ -0.32
CHRNB1-205ENST00000573209 PSMD1Q99460 953 aa13.03□□□□□ -0.32
CHRNB1-205ENST00000573209 ZFYVE16Q7Z3T8 1539 aa13.03□□□□□ -0.32
CHRNB1-205ENST00000573209 UHRF1BP1LA0JNW5 1464 aa13.03□□□□□ -0.32
CHRNB1-205ENST00000573209 SCAF11Q99590 1463 aaKnown RBP13.03□□□□□ -0.32
CHRNB1-205ENST00000573209 PIK3C2GO75747 1445 aa13.03□□□□□ -0.32
CHRNB1-205ENST00000573209 GABPB1Q06547 395 aaPredicted RBP13.02□□□□□ -0.32
CHRNB1-205ENST00000573209 CDCA7LQ96GN5 454 aa13.02□□□□□ -0.32
CHRNB1-205ENST00000573209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.32
CHRNB1-205ENST00000573209 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.32
CHRNB1-205ENST00000573209 RTEL1-TNFRSF6BF6WH68 1400 aa13.02□□□□□ -0.32
CHRNB1-205ENST00000573209 CDCA8Q53HL2 280 aa13.02□□□□□ -0.33
CHRNB1-205ENST00000573209 IFT172Q9UG01 1749 aa13.01□□□□□ -0.33
CHRNB1-205ENST00000573209 MCM4P33991 863 aa13.01□□□□□ -0.33
CHRNB1-205ENST00000573209 MYCBPQ99417 103 aaPredicted RBP13.01□□□□□ -0.33
CHRNB1-205ENST00000573209 PTPRTO14522 1441 aa13.01□□□□□ -0.33
CHRNB1-205ENST00000573209 GZF1Q9H116 711 aaPredicted RBP13.01□□□□□ -0.33
CHRNB1-205ENST00000573209 KIF1BO60333 1816 aa13.01□□□□□ -0.33
CHRNB1-205ENST00000573209 VWDEQ8N2E2 1590 aa13□□□□□ -0.33
CHRNB1-205ENST00000573209 INO80Q9ULG1 1556 aaPredicted RBP13□□□□□ -0.33
CHRNB1-205ENST00000573209 TRAK2O60296 914 aa13□□□□□ -0.33
CHRNB1-205ENST00000573209 SATB1Q01826 763 aa13□□□□□ -0.33
CHRNB1-205ENST00000573209 PUS7Q96PZ0 661 aaKnown RBP13□□□□□ -0.33
CHRNB1-205ENST00000573209 CALCOCO1Q9P1Z2 691 aa13□□□□□ -0.33
CHRNB1-205ENST00000573209 LOC102724159A0A0B4J2E5 919 aa13□□□□□ -0.33
CHRNB1-205ENST00000573209 PRR29P0C7W0 189 aa13□□□□□ -0.33
CHRNB1-205ENST00000573209 PWP2Q15269 919 aaKnown RBP13□□□□□ -0.33
CHRNB1-205ENST00000573209 EIF3AQ14152 1382 aaKnown RBP12.99□□□□□ -0.33
CHRNB1-205ENST00000573209 OS9Q13438 667 aaPredicted RBP12.99□□□□□ -0.33
CHRNB1-205ENST00000573209 ATP2B3Q16720 1220 aa12.99□□□□□ -0.33
CHRNB1-205ENST00000573209 MYO3AQ8NEV4 1616 aa12.99□□□□□ -0.33
CHRNB1-205ENST00000573209 ASXL2Q76L83 1435 aa12.99□□□□□ -0.33
CHRNB1-205ENST00000573209 CFAP44Q96MT7 982 aa12.99□□□□□ -0.33
CHRNB1-205ENST00000573209 CEP83Q9Y592 693 aa12.99□□□□□ -0.33
CHRNB1-205ENST00000573209 MAP3K4Q9Y6R4 1608 aa12.98□□□□□ -0.33
CHRNB1-205ENST00000573209 CAPN2P17655 700 aa12.98□□□□□ -0.33
CHRNB1-205ENST00000573209 FAM69CQ0P6D2 419 aa12.98□□□□□ -0.33
CHRNB1-205ENST00000573209 CRBNQ96SW2 442 aa12.98□□□□□ -0.33
CHRNB1-205ENST00000573209 ANTXR1Q9H6X2 564 aa12.98□□□□□ -0.33
CHRNB1-205ENST00000573209 KNSTRNQ9Y448 316 aa12.98□□□□□ -0.33
CHRNB1-205ENST00000573209 MCM5P33992 734 aa12.98□□□□□ -0.33
CHRNB1-205ENST00000573209 EFCAB2Q5VUJ9 269 aa12.98□□□□□ -0.33
CHRNB1-205ENST00000573209 MYRIPQ8NFW9 859 aa12.98□□□□□ -0.33
CHRNB1-205ENST00000573209 ZNF521Q96K83 1311 aa12.97□□□□□ -0.33
CHRNB1-205ENST00000573209 PPP2R1AP30153 589 aa12.97□□□□□ -0.33
CHRNB1-205ENST00000573209 MFAP1P55081 439 aaKnown RBP12.97□□□□□ -0.33
CHRNB1-205ENST00000573209 WDR43Q15061 677 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHRNB1-205ENST00000573209 NOL7Q9UMY1 257 aaKnown RBP12.97□□□□□ -0.33
CHRNB1-205ENST00000573209 SH3BP1Q9Y3L3 701 aa12.97□□□□□ -0.33
CHRNB1-205ENST00000573209 ABCA9Q8IUA7 1624 aa12.97□□□□□ -0.33
CHRNB1-205ENST00000573209 MYOM2P54296 1465 aa12.97□□□□□ -0.33
CHRNB1-205ENST00000573209 NBPF11Q86T75 865 aa12.96□□□□□ -0.33
CHRNB1-205ENST00000573209 ZBTB9Q96C00 473 aa12.96□□□□□ -0.33
CHRNB1-205ENST00000573209 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.33
CHRNB1-205ENST00000573209 CFAP65Q6ZU64 1925 aaKnown RBP12.96□□□□□ -0.33
CHRNB1-205ENST00000573209 KDM2BQ8NHM5 1336 aa12.96□□□□□ -0.33
CHRNB1-205ENST00000573209 ABCA6Q8N139 1617 aa12.96□□□□□ -0.33
CHRNB1-205ENST00000573209 DDX11L8A8MPP1 907 aa12.96□□□□□ -0.33
CHRNB1-205ENST00000573209 CTR9Q6PD62 1173 aa12.96□□□□□ -0.33
CHRNB1-205ENST00000573209 NCAPGQ9BPX3 1015 aa12.96□□□□□ -0.33
CHRNB1-205ENST00000573209 BRPF1P55201 1214 aaPredicted RBP12.95□□□□□ -0.34
CHRNB1-205ENST00000573209 C8orf34Q49A92 452 aa12.95□□□□□ -0.34
CHRNB1-205ENST00000573209 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.95□□□□□ -0.34
CHRNB1-205ENST00000573209 RAI14Q9P0K7 980 aa12.95□□□□□ -0.34
CHRNB1-205ENST00000573209 ADAMTS8Q9UP79 889 aa12.95□□□□□ -0.34
CHRNB1-205ENST00000573209 ATP7AQ04656 1500 aa12.95□□□□□ -0.34
CHRNB1-205ENST00000573209 PLEKHH1Q9ULM0 1364 aa12.95□□□□□ -0.34
CHRNB1-205ENST00000573209 CENPQQ7L2Z9 268 aaPredicted RBP12.95□□□□□ -0.34
CHRNB1-205ENST00000573209 PLIN1O60240 522 aa12.94□□□□□ -0.34
CHRNB1-205ENST00000573209 FEZ1Q99689 392 aa12.94□□□□□ -0.34
CHRNB1-205ENST00000573209 SMC4Q9NTJ3 1288 aa12.94□□□□□ -0.34
CHRNB1-205ENST00000573209 CCDC172P0C7W6 258 aa12.94□□□□□ -0.34
CHRNB1-205ENST00000573209 GTF2F1P35269 517 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHRNB1-205ENST00000573209 DUSP27Q5VZP5 1158 aa12.94□□□□□ -0.34
CHRNB1-205ENST00000573209 ZC3H13Q5T200 1668 aaKnown RBP12.93□□□□□ -0.34
CHRNB1-205ENST00000573209 TTC36A6NLP5 189 aa12.93□□□□□ -0.34
CHRNB1-205ENST00000573209 IRF6O14896 467 aa12.93□□□□□ -0.34
CHRNB1-205ENST00000573209 SIRT1Q96EB6 747 aa12.93□□□□□ -0.34
CHRNB1-205ENST00000573209 SLKQ9H2G2 1235 aaPredicted RBP12.93□□□□□ -0.34
CHRNB1-205ENST00000573209 GOLIM4O00461 696 aa12.93□□□□□ -0.34
CHRNB1-205ENST00000573209 TNNT3P45378 269 aaPredicted RBP12.93□□□□□ -0.34
CHRNB1-205ENST00000573209 HMGN5P82970 282 aaKnown RBP12.93□□□□□ -0.34
CHRNB1-205ENST00000573209 MAP2K1Q02750 393 aaPredicted RBP12.93□□□□□ -0.34
CHRNB1-205ENST00000573209 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms