RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 NBPF1Q3BBV0 1214 aa16.95■□□□□ 0.3
NDE1-206ENST00000572967 SIN3AQ96ST3 1273 aa16.93■□□□□ 0.3
NDE1-206ENST00000572967 ATAD2Q6PL18 1390 aa16.92■□□□□ 0.3
NDE1-206ENST00000572967 NEUROD1Q13562 356 aa16.92■□□□□ 0.3
NDE1-206ENST00000572967 NGDNQ8NEJ9 315 aaKnown RBP16.92■□□□□ 0.3
NDE1-206ENST00000572967 NRKQ7Z2Y5 1582 aa16.92■□□□□ 0.3
NDE1-206ENST00000572967 L3MBTL2Q969R5 705 aa16.91■□□□□ 0.3
NDE1-206ENST00000572967 UNC5CLQ8IV45 518 aa16.9■□□□□ 0.3
NDE1-206ENST00000572967 NUDT16Q96DE0 195 aaKnown RBP16.9■□□□□ 0.3
NDE1-206ENST00000572967 CENPJQ9HC77 1338 aaPredicted RBP16.9■□□□□ 0.3
NDE1-206ENST00000572967 PAK3O75914 559 aaPredicted RBP16.89■□□□□ 0.29
NDE1-206ENST00000572967 GJD4Q96KN9 370 aaPredicted RBP16.89■□□□□ 0.29
NDE1-206ENST00000572967 CDK19Q9BWU1 502 aa16.89■□□□□ 0.29
NDE1-206ENST00000572967 ROCK2O75116 1388 aaKnown RBP16.88■□□□□ 0.29
NDE1-206ENST00000572967 PPIP5K1Q6PFW1 1433 aa16.87■□□□□ 0.29
NDE1-206ENST00000572967 POLR3AO14802 1390 aaPredicted RBP16.87■□□□□ 0.29
NDE1-206ENST00000572967 AKAP12Q02952 1782 aa16.85■□□□□ 0.29
NDE1-206ENST00000572967 SRPK2P78362 688 aaKnown RBP16.85■□□□□ 0.29
NDE1-206ENST00000572967 CCDC9Q9Y3X0 531 aaKnown RBP16.85■□□□□ 0.29
NDE1-206ENST00000572967 ACEP12821 1306 aa16.85■□□□□ 0.29
NDE1-206ENST00000572967 PIK3C2AO00443 1686 aa16.83■□□□□ 0.28
NDE1-206ENST00000572967 VPS72Q15906 364 aa16.83■□□□□ 0.28
NDE1-206ENST00000572967 NUTM2GQ5VZR2 741 aa16.83■□□□□ 0.28
NDE1-206ENST00000572967 THSD7AQ9UPZ6 1657 aa16.83■□□□□ 0.28
NDE1-206ENST00000572967 FAM83GA6ND36 823 aa16.82■□□□□ 0.28
NDE1-206ENST00000572967 CABP2Q9NPB3 220 aa16.82■□□□□ 0.28
NDE1-206ENST00000572967 LMO7Q8WWI1 1683 aa16.81■□□□□ 0.28
NDE1-206ENST00000572967 KIAA0232Q92628 1395 aa16.81■□□□□ 0.28
NDE1-206ENST00000572967 PRDM11Q9NQV5 511 aa16.81■□□□□ 0.28
NDE1-206ENST00000572967 BTG4Q9NY30 223 aa16.81■□□□□ 0.28
NDE1-206ENST00000572967 CCDC61Q9Y6R9 512 aa16.81■□□□□ 0.28
NDE1-206ENST00000572967 A0A0G2JS52 829 aa16.8■□□□□ 0.28
NDE1-206ENST00000572967 MYT1Q01538 1121 aa16.8■□□□□ 0.28
NDE1-206ENST00000572967 MON2Q7Z3U7 1717 aa16.79■□□□□ 0.28
NDE1-206ENST00000572967 USP6P35125 1406 aa16.79■□□□□ 0.28
NDE1-206ENST00000572967 PLEKHG3A1L390 1219 aa16.78■□□□□ 0.28
NDE1-206ENST00000572967 NBPF8Q3BBV2 869 aa16.78■□□□□ 0.28
NDE1-206ENST00000572967 SEPT12Q8IYM1 358 aa16.78■□□□□ 0.28
NDE1-206ENST00000572967 CHRNA2Q15822 529 aa16.77■□□□□ 0.28
NDE1-206ENST00000572967 RGPD1P0DJD0 1748 aa16.76■□□□□ 0.27
NDE1-206ENST00000572967 SLIT3O75094 1523 aa16.75■□□□□ 0.27
NDE1-206ENST00000572967 WNK3Q9BYP7 1800 aa16.75■□□□□ 0.27
NDE1-206ENST00000572967 USP19O94966 1318 aa16.75■□□□□ 0.27
NDE1-206ENST00000572967 EVC2Q86UK5 1308 aa16.75■□□□□ 0.27
NDE1-206ENST00000572967 ZC3H6P61129 1189 aaKnown RBP16.75■□□□□ 0.27
NDE1-206ENST00000572967 FAM98CQ17RN3 349 aaKnown RBP16.75■□□□□ 0.27
NDE1-206ENST00000572967 ABTB2Q8N961 1025 aa16.75■□□□□ 0.27
NDE1-206ENST00000572967 BLMP54132 1417 aaPredicted RBP16.75■□□□□ 0.27
NDE1-206ENST00000572967 TNS1Q9HBL0 1735 aaKnown RBP16.75■□□□□ 0.27
NDE1-206ENST00000572967 EP400Q96L91 3159 aa16.74■□□□□ 0.27
NDE1-206ENST00000572967 CAMTA1Q9Y6Y1 1673 aa16.74■□□□□ 0.27
NDE1-206ENST00000572967 SSH2Q76I76 1423 aa16.73■□□□□ 0.27
NDE1-206ENST00000572967 STRN4Q9NRL3 753 aa16.73■□□□□ 0.27
NDE1-206ENST00000572967 CABP1Q9NZU7 370 aa16.73■□□□□ 0.27
NDE1-206ENST00000572967 SPATA31A5Q5VU36 1347 aa16.72■□□□□ 0.27
NDE1-206ENST00000572967 SPATA31A7Q8IWB4 1347 aa16.72■□□□□ 0.27
NDE1-206ENST00000572967 RGPD5Q99666 1765 aa16.72■□□□□ 0.27
NDE1-206ENST00000572967 KRT27Q7Z3Y8 459 aa16.71■□□□□ 0.27
NDE1-206ENST00000572967 USP54Q70EL1 1684 aa16.7■□□□□ 0.26
NDE1-206ENST00000572967 COL5A2P05997 1499 aaPredicted RBP16.7■□□□□ 0.26
NDE1-206ENST00000572967 BRD4O60885 1362 aaPredicted RBP16.7■□□□□ 0.26
NDE1-206ENST00000572967 CPDO75976 1380 aa16.7■□□□□ 0.26
NDE1-206ENST00000572967 SBNO2Q9Y2G9 1366 aa16.7■□□□□ 0.26
NDE1-206ENST00000572967 CARD11Q9BXL7 1154 aa16.7■□□□□ 0.26
NDE1-206ENST00000572967 COL18A1P39060 1754 aa16.69■□□□□ 0.26
NDE1-206ENST00000572967 ZBTB7CA1YPR0 619 aa16.69■□□□□ 0.26
NDE1-206ENST00000572967 PARP4Q9UKK3 1724 aaKnown RBP16.69■□□□□ 0.26
NDE1-206ENST00000572967 LRRC37A3O60309 1634 aa16.68■□□□□ 0.26
NDE1-206ENST00000572967 ONECUT3O60422 494 aaPredicted RBP16.68■□□□□ 0.26
NDE1-206ENST00000572967 NLRP13Q86W25 1043 aa16.68■□□□□ 0.26
NDE1-206ENST00000572967 LTN1O94822 1766 aa16.68■□□□□ 0.26
NDE1-206ENST00000572967 SPATA31A1Q5TZJ5 1347 aa16.68■□□□□ 0.26
NDE1-206ENST00000572967 USP35Q9P2H5 1018 aa16.67■□□□□ 0.26
NDE1-206ENST00000572967 NFAT5O94916 1531 aa16.66■□□□□ 0.26
NDE1-206ENST00000572967 CPSF1Q10570 1443 aaKnown RBP16.66■□□□□ 0.26
NDE1-206ENST00000572967 SF3B2Q13435 895 aaKnown RBP16.66■□□□□ 0.26
NDE1-206ENST00000572967 FAM182BQ5T319 152 aa16.66■□□□□ 0.26
NDE1-206ENST00000572967 DEFB132Q7Z7B7 95 aa16.66■□□□□ 0.26
NDE1-206ENST00000572967 CCDC125Q86Z20 511 aa16.66■□□□□ 0.26
NDE1-206ENST00000572967 CD163L1Q9NR16 1453 aa16.66■□□□□ 0.26
NDE1-206ENST00000572967 GCP02774 474 aa16.65■□□□□ 0.26
NDE1-206ENST00000572967 NLRP6P59044 892 aa16.65■□□□□ 0.26
NDE1-206ENST00000572967 KTN1Q86UP2 1357 aaKnown RBP16.64■□□□□ 0.26
NDE1-206ENST00000572967 LARP1Q6PKG0 1096 aaKnown RBP16.64■□□□□ 0.25
NDE1-206ENST00000572967 SOX12O15370 315 aa16.63■□□□□ 0.25
NDE1-206ENST00000572967 EVA1CP58658 441 aa16.63■□□□□ 0.25
NDE1-206ENST00000572967 TTC21BQ7Z4L5 1316 aa16.63■□□□□ 0.25
NDE1-206ENST00000572967 CRB1P82279 1406 aa16.62■□□□□ 0.25
NDE1-206ENST00000572967 ZRANB1Q9UGI0 708 aa16.61■□□□□ 0.25
NDE1-206ENST00000572967 TTC21AQ8NDW8 1320 aa16.61■□□□□ 0.25
NDE1-206ENST00000572967 RREB1Q92766 1687 aa16.6■□□□□ 0.25
NDE1-206ENST00000572967 AATKQ6ZMQ8 1374 aa16.6■□□□□ 0.25
NDE1-206ENST00000572967 ABCC6O95255 1503 aa16.6■□□□□ 0.25
NDE1-206ENST00000572967 PEAK1Q9H792 1746 aa16.59■□□□□ 0.25
NDE1-206ENST00000572967 A0A1W2PP64 1363 aa16.59■□□□□ 0.25
NDE1-206ENST00000572967 NUP188Q5SRE5 1749 aa16.59■□□□□ 0.25
NDE1-206ENST00000572967 BAG6P46379 1132 aa16.58■□□□□ 0.24
NDE1-206ENST00000572967 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.58■□□□□ 0.24
NDE1-206ENST00000572967 TCP11L2Q8N4U5 519 aa16.58■□□□□ 0.24
NDE1-206ENST00000572967 TMC1Q8TDI8 760 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms