RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 INTS3Q68E01 1043 aaKnown RBP11.3□□□□□ -0.6
USP6-204ENST00000572949 SMARCE1Q969G3 411 aa11.3□□□□□ -0.6
USP6-204ENST00000572949 GNAI1P63096 354 aa11.3□□□□□ -0.6
USP6-204ENST00000572949 MNS1Q8NEH6 495 aa11.3□□□□□ -0.6
USP6-204ENST00000572949 TNIP1Q15025 636 aa11.29□□□□□ -0.6
USP6-204ENST00000572949 CLASRPQ8N2M8 674 aaKnown RBP11.29□□□□□ -0.6
USP6-204ENST00000572949 SMARCA2P51531 1590 aa11.29□□□□□ -0.6
USP6-204ENST00000572949 ZPR1O75312 459 aa11.29□□□□□ -0.6
USP6-204ENST00000572949 CCDC30Q5VVM6 783 aa11.28□□□□□ -0.6
USP6-204ENST00000572949 EZRP15311 586 aaKnown RBP11.28□□□□□ -0.6
USP6-204ENST00000572949 TANGO6Q9C0B7 1094 aa11.28□□□□□ -0.6
USP6-204ENST00000572949 PRDM11Q9NQV5 511 aa11.28□□□□□ -0.6
USP6-204ENST00000572949 STIM1Q13586 685 aa11.28□□□□□ -0.6
USP6-204ENST00000572949 LUC7LQ9NQ29 371 aaKnown RBP11.28□□□□□ -0.6
USP6-204ENST00000572949 SEPT11Q9NVA2 429 aaKnown RBP11.28□□□□□ -0.6
USP6-204ENST00000572949 SPG7Q9UQ90 795 aa11.28□□□□□ -0.6
USP6-204ENST00000572949 ST20-MTHFSA0A0A6YYL1 179 aa11.28□□□□□ -0.6
USP6-204ENST00000572949 CCDC57Q2TAC2 916 aa11.28□□□□□ -0.6
USP6-204ENST00000572949 ENOX2Q16206 610 aaKnown RBP11.27□□□□□ -0.6
USP6-204ENST00000572949 CCDC181Q5TID7 509 aa11.27□□□□□ -0.6
USP6-204ENST00000572949 ZNF771Q7L3S4 317 aaPredicted RBP11.27□□□□□ -0.6
USP6-204ENST00000572949 THEMISQ8N1K5 641 aaPredicted RBP11.27□□□□□ -0.6
USP6-204ENST00000572949 CCDC69A6NI79 296 aa11.27□□□□□ -0.61
USP6-204ENST00000572949 ZNHIT6Q9NWK9 470 aaKnown RBP11.27□□□□□ -0.61
USP6-204ENST00000572949 MYBBP1AQ9BQG0 1328 aaKnown RBP11.27□□□□□ -0.61
USP6-204ENST00000572949 L3MBTL2Q969R5 705 aa11.27□□□□□ -0.61
USP6-204ENST00000572949 USP5P45974 858 aa11.27□□□□□ -0.61
USP6-204ENST00000572949 CENPQQ7L2Z9 268 aaPredicted RBP11.27□□□□□ -0.61
USP6-204ENST00000572949 GAS2L2Q8NHY3 880 aa11.27□□□□□ -0.61
USP6-204ENST00000572949 ARGLU1Q9NWB6 273 aaPredicted RBP11.27□□□□□ -0.61
USP6-204ENST00000572949 GBP2P32456 591 aaPredicted RBP11.27□□□□□ -0.61
USP6-204ENST00000572949 BMP2KQ9NSY1 1161 aaPredicted RBP11.27□□□□□ -0.61
USP6-204ENST00000572949 SSBP05455 408 aaKnown RBP eCLIP11.26□□□□□ -0.61
USP6-204ENST00000572949 TRIM22Q8IYM9 498 aa11.26□□□□□ -0.61
USP6-204ENST00000572949 COG6Q9Y2V7 657 aa11.26□□□□□ -0.61
USP6-204ENST00000572949 GRIPAP1Q4V328 841 aa11.26□□□□□ -0.61
USP6-204ENST00000572949 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.26□□□□□ -0.61
USP6-204ENST00000572949 SSR1P43307 286 aaKnown RBP11.26□□□□□ -0.61
USP6-204ENST00000572949 CRACR2BQ8N4Y2 399 aaPredicted RBP11.26□□□□□ -0.61
USP6-204ENST00000572949 PIP4K2AP48426 406 aaPredicted RBP11.26□□□□□ -0.61
USP6-204ENST00000572949 ANAPC15P60006 121 aa11.26□□□□□ -0.61
USP6-204ENST00000572949 DEF6Q9H4E7 631 aa11.26□□□□□ -0.61
USP6-204ENST00000572949 HIP1O00291 1037 aa11.26□□□□□ -0.61
USP6-204ENST00000572949 POTEJP0CG39 1038 aa11.26□□□□□ -0.61
USP6-204ENST00000572949 CRBNQ96SW2 442 aa11.26□□□□□ -0.61
USP6-204ENST00000572949 ZNF652Q9Y2D9 606 aa11.26□□□□□ -0.61
USP6-204ENST00000572949 DZIP1LQ8IYY4 767 aaKnown RBP11.25□□□□□ -0.61
USP6-204ENST00000572949 IFT57Q9NWB7 429 aa11.25□□□□□ -0.61
USP6-204ENST00000572949 HMGN5P82970 282 aaKnown RBP11.25□□□□□ -0.61
USP6-204ENST00000572949 NUP133Q8WUM0 1156 aa11.25□□□□□ -0.61
USP6-204ENST00000572949 MYL6BP14649 208 aa11.25□□□□□ -0.61
USP6-204ENST00000572949 MTHFSP49914 203 aa11.24□□□□□ -0.61
USP6-204ENST00000572949 ZSCAN25Q6NSZ9 544 aa11.24□□□□□ -0.61
USP6-204ENST00000572949 IGHMBP2P38935 993 aaKnown RBP11.24□□□□□ -0.61
USP6-204ENST00000572949 MAP3K9P80192 1104 aa11.24□□□□□ -0.61
USP6-204ENST00000572949 ERCC4Q92889 916 aaPredicted RBP11.24□□□□□ -0.61
USP6-204ENST00000572949 KINO60870 393 aaKnown RBP11.24□□□□□ -0.61
USP6-204ENST00000572949 ANKLE2Q86XL3 938 aa11.24□□□□□ -0.61
USP6-204ENST00000572949 ANKIB1Q9P2G1 1089 aa11.24□□□□□ -0.61
USP6-204ENST00000572949 SURF6O75683 361 aaKnown RBP11.24□□□□□ -0.61
USP6-204ENST00000572949 VTI1AQ96AJ9 217 aa11.24□□□□□ -0.61
USP6-204ENST00000572949 RAB3GAP2Q9H2M9 1393 aa11.23□□□□□ -0.61
USP6-204ENST00000572949 TDO2P48775 406 aa11.23□□□□□ -0.61
USP6-204ENST00000572949 RAI14Q9P0K7 980 aa11.23□□□□□ -0.61
USP6-204ENST00000572949 LRP2BPQ9P2M1 347 aa11.23□□□□□ -0.61
USP6-204ENST00000572949 APAF1O14727 1248 aa11.23□□□□□ -0.61
USP6-204ENST00000572949 ZNF287Q9HBT7 754 aa11.23□□□□□ -0.61
USP6-204ENST00000572949 H0YHG0 523 aa11.22□□□□□ -0.61
USP6-204ENST00000572949 GOLGA6L10A6NI86 522 aa11.22□□□□□ -0.61
USP6-204ENST00000572949 ZNF428Q96B54 188 aa11.22□□□□□ -0.61
USP6-204ENST00000572949 RUNDC1Q96C34 613 aa11.22□□□□□ -0.61
USP6-204ENST00000572949 TXLNBQ8N3L3 684 aa11.22□□□□□ -0.61
USP6-204ENST00000572949 NGLY1Q96IV0 654 aa11.22□□□□□ -0.61
USP6-204ENST00000572949 HOMER2Q9NSB8 354 aa11.22□□□□□ -0.61
USP6-204ENST00000572949 SMC2O95347 1197 aa11.22□□□□□ -0.61
USP6-204ENST00000572949 FKBP4Q02790 459 aaKnown RBP eCLIP11.22□□□□□ -0.61
USP6-204ENST00000572949 NOM1Q5C9Z4 860 aaKnown RBP11.22□□□□□ -0.61
USP6-204ENST00000572949 CABP2Q9NPB3 220 aa11.22□□□□□ -0.61
USP6-204ENST00000572949 ZNF219Q9P2Y4 722 aaPredicted RBP11.22□□□□□ -0.61
USP6-204ENST00000572949 CLEC11AQ9Y240 323 aa11.22□□□□□ -0.61
USP6-204ENST00000572949 COMMD10Q9Y6G5 202 aa11.22□□□□□ -0.61
USP6-204ENST00000572949 CCDC150Q8NCX0 1101 aa11.22□□□□□ -0.61
USP6-204ENST00000572949 BCL11BQ9C0K0 894 aaPredicted RBP11.22□□□□□ -0.61
USP6-204ENST00000572949 STARD3NLO95772 234 aa11.21□□□□□ -0.61
USP6-204ENST00000572949 ADAMTS2O95450 1211 aa11.21□□□□□ -0.61
USP6-204ENST00000572949 RPGRQ92834 1020 aaKnown RBP11.21□□□□□ -0.61
USP6-204ENST00000572949 ZNF396Q96N95 335 aaPredicted RBP11.21□□□□□ -0.61
USP6-204ENST00000572949 GNAI3P08754 354 aa11.21□□□□□ -0.62
USP6-204ENST00000572949 JMYQ8N9B5 988 aa11.21□□□□□ -0.62
USP6-204ENST00000572949 CCDC112Q8NEF3 446 aa11.21□□□□□ -0.62
USP6-204ENST00000572949 PSMD1Q99460 953 aa11.21□□□□□ -0.62
USP6-204ENST00000572949 NOL7Q9UMY1 257 aaKnown RBP11.21□□□□□ -0.62
USP6-204ENST00000572949 FMNL2Q96PY5 1086 aa11.21□□□□□ -0.62
USP6-204ENST00000572949 UBAC1Q9BSL1 405 aa11.21□□□□□ -0.62
USP6-204ENST00000572949 SEC63Q9UGP8 760 aaKnown RBP11.2□□□□□ -0.62
USP6-204ENST00000572949 SIL1Q9H173 461 aa11.2□□□□□ -0.62
USP6-204ENST00000572949 ZNF710Q8N1W2 664 aa11.2□□□□□ -0.62
USP6-204ENST00000572949 GGNBP2Q9H3C7 697 aa11.2□□□□□ -0.62
USP6-204ENST00000572949 FHOD3Q2V2M9 1422 aa11.2□□□□□ -0.62
USP6-204ENST00000572949 PABPN1LA6NDY0 278 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms