RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-215ENST00000572905 NUTM2BA6NNL0 878 aaPredicted RBP10.45□□□□□ -0.74
TOM1L1-215ENST00000572905 NUTM2EB1AL46 878 aaPredicted RBP10.45□□□□□ -0.74
TOM1L1-215ENST00000572905 QPCTQ16769 361 aa10.45□□□□□ -0.74
TOM1L1-215ENST00000572905 NUTM2DQ5VT03 806 aaPredicted RBP10.45□□□□□ -0.74
TOM1L1-215ENST00000572905 NUTM2AQ8IVF1 878 aaPredicted RBP10.45□□□□□ -0.74
TOM1L1-215ENST00000572905 SMCPP49901 116 aaPredicted RBP10.44□□□□□ -0.74
TOM1L1-215ENST00000572905 PRPF38BQ5VTL8 546 aaKnown RBP10.44□□□□□ -0.74
TOM1L1-215ENST00000572905 LYPD8Q6UX82 237 aa10.44□□□□□ -0.74
TOM1L1-215ENST00000572905 GMPR2Q9P2T1 348 aaKnown RBP10.44□□□□□ -0.74
TOM1L1-215ENST00000572905 MAP10Q9P2G4 905 aa10.43□□□□□ -0.74
TOM1L1-215ENST00000572905 ZNF511Q8NB15 262 aa10.42□□□□□ -0.74
TOM1L1-215ENST00000572905 TIMELESSQ9UNS1 1208 aa10.42□□□□□ -0.74
TOM1L1-215ENST00000572905 PER1O15534 1290 aaPredicted RBP10.41□□□□□ -0.74
TOM1L1-215ENST00000572905 SIAH2O43255 324 aa10.41□□□□□ -0.74
TOM1L1-215ENST00000572905 POLR3EQ9NVU0 708 aa10.41□□□□□ -0.74
TOM1L1-215ENST00000572905 CLK2P49760 499 aaKnown RBP10.4□□□□□ -0.74
TOM1L1-215ENST00000572905 GPBP1L1Q9HC44 474 aaPredicted RBP10.4□□□□□ -0.74
TOM1L1-215ENST00000572905 TLL2Q9Y6L7 1015 aa10.4□□□□□ -0.74
TOM1L1-215ENST00000572905 WASF2Q9Y6W5 498 aa10.4□□□□□ -0.74
TOM1L1-215ENST00000572905 C11orf95C9JLR9 678 aaPredicted RBP10.39□□□□□ -0.75
TOM1L1-215ENST00000572905 ATP13A2Q9NQ11 1180 aa10.39□□□□□ -0.75
TOM1L1-215ENST00000572905 LILRB3O75022 631 aa10.38□□□□□ -0.75
TOM1L1-215ENST00000572905 F12P00748 615 aaPredicted RBP10.38□□□□□ -0.75
TOM1L1-215ENST00000572905 TUSC1Q2TAM9 212 aa10.37□□□□□ -0.75
TOM1L1-215ENST00000572905 RTL5Q5HYW3 569 aaPredicted RBP10.37□□□□□ -0.75
TOM1L1-215ENST00000572905 RSPH6AQ9H0K4 717 aa10.37□□□□□ -0.75
TOM1L1-215ENST00000572905 KDM4CQ9H3R0 1056 aa10.36□□□□□ -0.75
TOM1L1-215ENST00000572905 VARSP26640 1264 aaKnown RBP10.35□□□□□ -0.75
TOM1L1-215ENST00000572905 HELBQ8NG08 1087 aaPredicted RBP10.35□□□□□ -0.75
TOM1L1-215ENST00000572905 FOXJ1Q92949 421 aa10.35□□□□□ -0.75
TOM1L1-215ENST00000572905 ATP1B4Q9UN42 357 aaPredicted RBP10.34□□□□□ -0.75
TOM1L1-215ENST00000572905 SNRPBP14678 240 aaKnown RBP10.32□□□□□ -0.76
TOM1L1-215ENST00000572905 AGERQ15109 404 aa10.32□□□□□ -0.76
TOM1L1-215ENST00000572905 FAM117AQ9C073 453 aa10.32□□□□□ -0.76
TOM1L1-215ENST00000572905 CAPN5O15484 640 aaPredicted RBP10.31□□□□□ -0.76
TOM1L1-215ENST00000572905 BMP1P13497 986 aa10.31□□□□□ -0.76
TOM1L1-215ENST00000572905 ARID5BQ14865 1188 aa10.31□□□□□ -0.76
TOM1L1-215ENST00000572905 C14orf37Q86TY3 774 aa10.31□□□□□ -0.76
TOM1L1-215ENST00000572905 PLEKHG3A1L390 1219 aa10.3□□□□□ -0.76
TOM1L1-215ENST00000572905 FAM174AQ8TBP5 190 aa10.3□□□□□ -0.76
TOM1L1-215ENST00000572905 SENP2Q9HC62 589 aa10.3□□□□□ -0.76
TOM1L1-215ENST00000572905 NNTQ13423 1086 aa10.29□□□□□ -0.76
TOM1L1-215ENST00000572905 TRIM47Q96LD4 638 aa10.29□□□□□ -0.76
TOM1L1-215ENST00000572905 CTDSPL2Q05D32 466 aa10.28□□□□□ -0.76
TOM1L1-215ENST00000572905 C4orf48Q5BLP8 95 aa10.28□□□□□ -0.76
TOM1L1-215ENST00000572905 IL27Q8NEV9 243 aa10.28□□□□□ -0.76
TOM1L1-215ENST00000572905 DDRGK1Q96HY6 314 aa10.28□□□□□ -0.76
TOM1L1-215ENST00000572905 SKIV2LQ15477 1246 aaKnown RBP10.27□□□□□ -0.77
TOM1L1-215ENST00000572905 SH3D19Q5HYK7 790 aa10.27□□□□□ -0.77
TOM1L1-215ENST00000572905 FBXO31Q5XUX0 539 aaPredicted RBP10.27□□□□□ -0.77
TOM1L1-215ENST00000572905 PROCA1Q8NCQ7 364 aaPredicted RBP10.27□□□□□ -0.77
TOM1L1-215ENST00000572905 ADH1CP00326 375 aa10.26□□□□□ -0.77
TOM1L1-215ENST00000572905 BPHLQ86WA6 291 aaPredicted RBP10.26□□□□□ -0.77
TOM1L1-215ENST00000572905 MPNDQ8N594 471 aa10.26□□□□□ -0.77
TOM1L1-215ENST00000572905 TREML4Q6UXN2 200 aa10.25□□□□□ -0.77
TOM1L1-215ENST00000572905 TRIM46Q7Z4K8 759 aa10.25□□□□□ -0.77
TOM1L1-215ENST00000572905 ARMC2Q8NEN0 867 aa10.25□□□□□ -0.77
TOM1L1-215ENST00000572905 KIFC2Q96AC6 838 aa10.25□□□□□ -0.77
TOM1L1-215ENST00000572905 MAGEB6P1A0A0J9YX57 407 aa10.24□□□□□ -0.77
TOM1L1-215ENST00000572905 NBPF14Q5TI25 921 aa10.24□□□□□ -0.77
TOM1L1-215ENST00000572905 LRRN4Q8WUT4 740 aa10.24□□□□□ -0.77
TOM1L1-215ENST00000572905 WDR4P57081 412 aaKnown RBP10.23□□□□□ -0.77
TOM1L1-215ENST00000572905 CDK15Q96Q40 435 aa10.23□□□□□ -0.77
TOM1L1-215ENST00000572905 CARD14Q9BXL6 1004 aa10.23□□□□□ -0.77
TOM1L1-215ENST00000572905 TIMP2P16035 220 aa10.22□□□□□ -0.77
TOM1L1-215ENST00000572905 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.22□□□□□ -0.77
TOM1L1-215ENST00000572905 WFS1O76024 890 aa10.21□□□□□ -0.77
TOM1L1-215ENST00000572905 AP1G2O75843 785 aa10.2□□□□□ -0.78
TOM1L1-215ENST00000572905 NR3C2P08235 984 aa10.2□□□□□ -0.78
TOM1L1-215ENST00000572905 LCE2AQ5TA79 106 aaPredicted RBP10.2□□□□□ -0.78
TOM1L1-215ENST00000572905 SH3BP5LQ7L8J4 393 aa10.2□□□□□ -0.78
TOM1L1-215ENST00000572905 SH3RF1Q7Z6J0 888 aa10.2□□□□□ -0.78
TOM1L1-215ENST00000572905 ZIC2O95409 532 aaPredicted RBP10.19□□□□□ -0.78
TOM1L1-215ENST00000572905 NFX1Q12986 1120 aaKnown RBP10.19□□□□□ -0.78
TOM1L1-215ENST00000572905 ZFP42Q96MM3 310 aa10.19□□□□□ -0.78
TOM1L1-215ENST00000572905 FSHRP23945 695 aa10.18□□□□□ -0.78
TOM1L1-215ENST00000572905 GRM5P41594 1212 aa10.18□□□□□ -0.78
TOM1L1-215ENST00000572905 NR5A1Q13285 461 aa10.18□□□□□ -0.78
TOM1L1-215ENST00000572905 NR6A1Q15406 480 aa10.18□□□□□ -0.78
TOM1L1-215ENST00000572905 PPP2R2DQ66LE6 453 aa10.18□□□□□ -0.78
TOM1L1-215ENST00000572905 VASH1Q7L8A9 365 aaPredicted RBP10.18□□□□□ -0.78
TOM1L1-215ENST00000572905 ITPKCQ96DU7 683 aa10.18□□□□□ -0.78
TOM1L1-215ENST00000572905 PURBQ96QR8 312 aaKnown RBP10.18□□□□□ -0.78
TOM1L1-215ENST00000572905 C1QTNF2Q9BXJ5 285 aa10.18□□□□□ -0.78
TOM1L1-215ENST00000572905 ZFAND3Q9H8U3 227 aa10.18□□□□□ -0.78
TOM1L1-215ENST00000572905 MRPL14Q6P1L8 145 aaKnown RBP10.17□□□□□ -0.78
TOM1L1-215ENST00000572905 KLF16Q9BXK1 252 aaPredicted RBP10.17□□□□□ -0.78
TOM1L1-215ENST00000572905 TERTO14746 1132 aaKnown RBP10.16□□□□□ -0.78
TOM1L1-215ENST00000572905 GPKOWQ92917 476 aaPredicted RBP eCLIP10.16□□□□□ -0.78
TOM1L1-215ENST00000572905 FKBPLQ9UIM3 349 aa10.16□□□□□ -0.78
TOM1L1-215ENST00000572905 SCARF1Q14162 830 aa10.15□□□□□ -0.78
TOM1L1-215ENST00000572905 ARHGAP9Q9BRR9 750 aa10.15□□□□□ -0.78
TOM1L1-215ENST00000572905 ERFEQ4G0M1 354 aa10.14□□□□□ -0.79
TOM1L1-215ENST00000572905 TRMT44Q8IYL2 757 aaKnown RBP10.14□□□□□ -0.79
TOM1L1-215ENST00000572905 USP17L8P0C7I0 530 aa10.13□□□□□ -0.79
TOM1L1-215ENST00000572905 C6orf118Q5T5N4 469 aa10.13□□□□□ -0.79
TOM1L1-215ENST00000572905 EPS8L1Q8TE68 723 aa10.13□□□□□ -0.79
TOM1L1-215ENST00000572905 MAP4K5Q9Y4K4 846 aa10.13□□□□□ -0.79
TOM1L1-215ENST00000572905 LCE2CQ5TA81 110 aa10.12□□□□□ -0.79
TOM1L1-215ENST00000572905 PDXDC2PQ6P474 469 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms