RNA–Protein interactions for RNA: ENST00000572503.1

NDE1-204, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 285 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-204ENST00000572503 OVOS2A0A0J9YW53 1432 aa6.24□□□□□ -1.41
NDE1-204ENST00000572503 OVOS2Q6IE36 1432 aa6.24□□□□□ -1.41
NDE1-204ENST00000572503 STRCP1A6NGW2 1772 aa6.23□□□□□ -1.41
NDE1-204ENST00000572503 PIK3C2AO00443 1686 aa6.23□□□□□ -1.41
NDE1-204ENST00000572503 PLEKHG3A1L390 1219 aa6.23□□□□□ -1.41
NDE1-204ENST00000572503 MORC1Q86VD1 984 aa6.23□□□□□ -1.41
NDE1-204ENST00000572503 NUDT16Q96DE0 195 aaKnown RBP6.23□□□□□ -1.41
NDE1-204ENST00000572503 SLC26A8Q96RN1 970 aa6.23□□□□□ -1.41
NDE1-204ENST00000572503 AMOTL2Q9Y2J4 779 aa6.23□□□□□ -1.41
NDE1-204ENST00000572503 NPHP4O75161 1426 aaPredicted RBP6.23□□□□□ -1.41
NDE1-204ENST00000572503 CDK12Q9NYV4 1490 aaPredicted RBP6.22□□□□□ -1.41
NDE1-204ENST00000572503 RGPD1P0DJD0 1748 aa6.22□□□□□ -1.41
NDE1-204ENST00000572503 PEAK1Q9H792 1746 aa6.22□□□□□ -1.41
NDE1-204ENST00000572503 AATKQ6ZMQ8 1374 aa6.22□□□□□ -1.41
NDE1-204ENST00000572503 HOXD11P31277 338 aaPredicted RBP6.22□□□□□ -1.41
NDE1-204ENST00000572503 PDE3BQ13370 1112 aa6.22□□□□□ -1.41
NDE1-204ENST00000572503 NCBP3Q53F19 620 aaKnown RBP6.22□□□□□ -1.41
NDE1-204ENST00000572503 HDGFL2Q7Z4V5 671 aaPredicted RBP6.22□□□□□ -1.41
NDE1-204ENST00000572503 TRMT2AQ8IZ69 625 aaKnown RBP6.22□□□□□ -1.41
NDE1-204ENST00000572503 CCDC61Q9Y6R9 512 aa6.22□□□□□ -1.41
NDE1-204ENST00000572503 USP6P35125 1406 aa6.22□□□□□ -1.41
NDE1-204ENST00000572503 NCKAP5LQ9HCH0 1330 aa6.22□□□□□ -1.41
NDE1-204ENST00000572503 DSG3P32926 999 aa6.21□□□□□ -1.42
NDE1-204ENST00000572503 MTHFSP49914 203 aa6.21□□□□□ -1.42
NDE1-204ENST00000572503 ANKLE2Q86XL3 938 aa6.21□□□□□ -1.42
NDE1-204ENST00000572503 GGNBP2Q9H3C7 697 aa6.21□□□□□ -1.42
NDE1-204ENST00000572503 ADGRL3Q9HAR2 1447 aa6.21□□□□□ -1.42
NDE1-204ENST00000572503 XIRP1Q702N8 1843 aaKnown RBP6.2□□□□□ -1.42
NDE1-204ENST00000572503 USP31Q70CQ4 1352 aa6.2□□□□□ -1.42
NDE1-204ENST00000572503 KCNA6P17658 529 aa6.2□□□□□ -1.42
NDE1-204ENST00000572503 WDR43Q15061 677 aaKnown RBP eCLIP6.2□□□□□ -1.42
NDE1-204ENST00000572503 ERICH6BQ5W0A0 696 aa6.2□□□□□ -1.42
NDE1-204ENST00000572503 NGEFQ8N5V2 710 aa6.2□□□□□ -1.42
NDE1-204ENST00000572503 STRCQ7RTU9 1775 aa6.2□□□□□ -1.42
NDE1-204ENST00000572503 TRPM3Q9HCF6 1732 aaPredicted RBP6.19□□□□□ -1.42
NDE1-204ENST00000572503 DLG5Q8TDM6 1919 aa6.19□□□□□ -1.42
NDE1-204ENST00000572503 PHRF1Q9P1Y6 1649 aaKnown RBP6.19□□□□□ -1.42
NDE1-204ENST00000572503 FKBP8Q14318 412 aa6.19□□□□□ -1.42
NDE1-204ENST00000572503 CDCA7LQ96GN5 454 aa6.19□□□□□ -1.42
NDE1-204ENST00000572503 ZNF692Q9BU19 519 aaPredicted RBP6.19□□□□□ -1.42
NDE1-204ENST00000572503 ACEP12821 1306 aa6.19□□□□□ -1.42
NDE1-204ENST00000572503 TTC21BQ7Z4L5 1316 aa6.19□□□□□ -1.42
NDE1-204ENST00000572503 SENP3-EIF4A1A0A087X0R7 540 aa6.18□□□□□ -1.42
NDE1-204ENST00000572503 SLFN5Q08AF3 891 aa6.18□□□□□ -1.42
NDE1-204ENST00000572503 DUSP27Q5VZP5 1158 aa6.18□□□□□ -1.42
NDE1-204ENST00000572503 NME9Q86XW9 330 aa6.18□□□□□ -1.42
NDE1-204ENST00000572503 BCANQ96GW7 911 aa6.18□□□□□ -1.42
NDE1-204ENST00000572503 PLEKHF1Q96S99 279 aa6.18□□□□□ -1.42
NDE1-204ENST00000572503 POLKQ9UBT6 870 aa6.18□□□□□ -1.42
NDE1-204ENST00000572503 ZRANB1Q9UGI0 708 aa6.18□□□□□ -1.42
NDE1-204ENST00000572503 KIF1AQ12756 1690 aa6.17□□□□□ -1.42
NDE1-204ENST00000572503 LMTK3Q96Q04 1460 aa6.17□□□□□ -1.42
NDE1-204ENST00000572503 APAF1O14727 1248 aa6.17□□□□□ -1.42
NDE1-204ENST00000572503 TNNT2P45379 298 aaPredicted RBP6.17□□□□□ -1.42
NDE1-204ENST00000572503 CCDC27Q2M243 656 aa6.17□□□□□ -1.42
NDE1-204ENST00000572503 CCDC146Q8IYE0 955 aa6.17□□□□□ -1.42
NDE1-204ENST00000572503 RUNDC1Q96C34 613 aa6.17□□□□□ -1.42
NDE1-204ENST00000572503 CFAP53Q96M91 514 aa6.17□□□□□ -1.42
NDE1-204ENST00000572503 TTC21AQ8NDW8 1320 aa6.17□□□□□ -1.42
NDE1-204ENST00000572503 ALS2Q96Q42 1657 aa6.17□□□□□ -1.42
NDE1-204ENST00000572503 MST1RQ04912 1400 aa6.16□□□□□ -1.42
NDE1-204ENST00000572503 NFAT5O94916 1531 aa6.16□□□□□ -1.42
NDE1-204ENST00000572503 NEFLP07196 543 aa6.16□□□□□ -1.42
NDE1-204ENST00000572503 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.16□□□□□ -1.42
NDE1-204ENST00000572503 SPINK5Q9NQ38 1064 aaPredicted RBP6.16□□□□□ -1.42
NDE1-204ENST00000572503 CRYBG1Q9Y4K1 1723 aa6.16□□□□□ -1.42
NDE1-204ENST00000572503 LTN1O94822 1766 aa6.16□□□□□ -1.42
NDE1-204ENST00000572503 NCOA3Q9Y6Q9 1424 aa6.16□□□□□ -1.42
NDE1-204ENST00000572503 KDM4FA0A1W2PPD8 638 aa6.15□□□□□ -1.42
NDE1-204ENST00000572503 FBLN1P23142 703 aa6.15□□□□□ -1.42
NDE1-204ENST00000572503 IL13P35225 146 aa6.15□□□□□ -1.42
NDE1-204ENST00000572503 RRP1P56182 461 aaKnown RBP6.15□□□□□ -1.42
NDE1-204ENST00000572503 GOLGA2Q08379 1002 aa6.15□□□□□ -1.42
NDE1-204ENST00000572503 WWC1Q8IX03 1113 aa6.15□□□□□ -1.42
NDE1-204ENST00000572503 TCP11L2Q8N4U5 519 aa6.15□□□□□ -1.42
NDE1-204ENST00000572503 RSPH6AQ9H0K4 717 aa6.15□□□□□ -1.42
NDE1-204ENST00000572503 RCAN3Q9UKA8 241 aa6.15□□□□□ -1.42
NDE1-204ENST00000572503 EMILIN1Q9Y6C2 1016 aa6.15□□□□□ -1.42
NDE1-204ENST00000572503 DCCP43146 1447 aa6.15□□□□□ -1.43
NDE1-204ENST00000572503 SLIT3O75094 1523 aa6.15□□□□□ -1.43
NDE1-204ENST00000572503 CAMTA1Q9Y6Y1 1673 aa6.14□□□□□ -1.43
NDE1-204ENST00000572503 DIAPH1O60610 1272 aaKnown RBP6.14□□□□□ -1.43
NDE1-204ENST00000572503 COG3Q96JB2 828 aa6.14□□□□□ -1.43
NDE1-204ENST00000572503 SALL2Q9Y467 1007 aaPredicted RBP6.14□□□□□ -1.43
NDE1-204ENST00000572503 KIF24Q5T7B8 1368 aa6.14□□□□□ -1.43
NDE1-204ENST00000572503 LRRC37A3O60309 1634 aa6.14□□□□□ -1.43
NDE1-204ENST00000572503 E9PSI1 815 aa6.13□□□□□ -1.43
NDE1-204ENST00000572503 IRX6P78412 446 aaPredicted RBP6.13□□□□□ -1.43
NDE1-204ENST00000572503 WDR63Q8IWG1 891 aa6.13□□□□□ -1.43
NDE1-204ENST00000572503 PPP4R2Q9NY27 417 aa6.13□□□□□ -1.43
NDE1-204ENST00000572503 TRIM35Q9UPQ4 493 aa6.13□□□□□ -1.43
NDE1-204ENST00000572503 C1orf167Q5SNV9 1468 aa6.13□□□□□ -1.43
NDE1-204ENST00000572503 NUTM2FA1L443 756 aa6.12□□□□□ -1.43
NDE1-204ENST00000572503 SBNO1A3KN83 1393 aa6.12□□□□□ -1.43
NDE1-204ENST00000572503 FCHSD2O94868 740 aa6.12□□□□□ -1.43
NDE1-204ENST00000572503 RGPD2P0DJD1 1756 aa6.12□□□□□ -1.43
NDE1-204ENST00000572503 U2AF1L5P0DN76 240 aaPredicted RBP6.12□□□□□ -1.43
NDE1-204ENST00000572503 KDRP35968 1356 aa6.12□□□□□ -1.43
NDE1-204ENST00000572503 TMPOP42166 694 aaKnown RBP6.12□□□□□ -1.43
NDE1-204ENST00000572503 U2AF1Q01081 240 aaKnown RBP eCLIP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms