RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 NBPF1Q3BBV0 1214 aa18.67■□□□□ 0.58
ATP2A3-211ENST00000572176 CCDC125Q86Z20 511 aa18.67■□□□□ 0.58
ATP2A3-211ENST00000572176 CDK19Q9BWU1 502 aa18.67■□□□□ 0.58
ATP2A3-211ENST00000572176 ONECUT3O60422 494 aaPredicted RBP18.66■□□□□ 0.58
ATP2A3-211ENST00000572176 SEPT12Q8IYM1 358 aa18.66■□□□□ 0.58
ATP2A3-211ENST00000572176 BLMP54132 1417 aaPredicted RBP18.65■□□□□ 0.58
ATP2A3-211ENST00000572176 PAK3O75914 559 aaPredicted RBP18.64■□□□□ 0.57
ATP2A3-211ENST00000572176 BTG4Q9NY30 223 aa18.64■□□□□ 0.57
ATP2A3-211ENST00000572176 CCDC9Q9Y3X0 531 aaKnown RBP18.64■□□□□ 0.57
ATP2A3-211ENST00000572176 QRICH2Q9H0J4 1663 aa18.63■□□□□ 0.57
ATP2A3-211ENST00000572176 CCDC61Q9Y6R9 512 aa18.63■□□□□ 0.57
ATP2A3-211ENST00000572176 PLEKHG3A1L390 1219 aa18.62■□□□□ 0.57
ATP2A3-211ENST00000572176 CENPJQ9HC77 1338 aaPredicted RBP18.62■□□□□ 0.57
ATP2A3-211ENST00000572176 TRPM1Q7Z4N2 1603 aa18.61■□□□□ 0.57
ATP2A3-211ENST00000572176 NRKQ7Z2Y5 1582 aa18.61■□□□□ 0.57
ATP2A3-211ENST00000572176 ACEP12821 1306 aa18.61■□□□□ 0.57
ATP2A3-211ENST00000572176 THSD7AQ9UPZ6 1657 aa18.6■□□□□ 0.57
ATP2A3-211ENST00000572176 KIAA0232Q92628 1395 aa18.59■□□□□ 0.57
ATP2A3-211ENST00000572176 NBPF8Q3BBV2 869 aa18.59■□□□□ 0.57
ATP2A3-211ENST00000572176 KRT27Q7Z3Y8 459 aa18.59■□□□□ 0.57
ATP2A3-211ENST00000572176 L3MBTL2Q969R5 705 aa18.59■□□□□ 0.57
ATP2A3-211ENST00000572176 PRDM11Q9NQV5 511 aa18.59■□□□□ 0.57
ATP2A3-211ENST00000572176 SRCAPQ6ZRS2 3230 aa18.59■□□□□ 0.57
ATP2A3-211ENST00000572176 PPIP5K1Q6PFW1 1433 aa18.58■□□□□ 0.57
ATP2A3-211ENST00000572176 SPATA31A5Q5VU36 1347 aa18.58■□□□□ 0.57
ATP2A3-211ENST00000572176 SPATA31A7Q8IWB4 1347 aa18.58■□□□□ 0.57
ATP2A3-211ENST00000572176 FAM98CQ17RN3 349 aaKnown RBP18.58■□□□□ 0.56
ATP2A3-211ENST00000572176 USP19O94966 1318 aa18.56■□□□□ 0.56
ATP2A3-211ENST00000572176 SRPK2P78362 688 aaKnown RBP18.56■□□□□ 0.56
ATP2A3-211ENST00000572176 ZRANB1Q9UGI0 708 aa18.56■□□□□ 0.56
ATP2A3-211ENST00000572176 NUTM2GQ5VZR2 741 aa18.55■□□□□ 0.56
ATP2A3-211ENST00000572176 SIN3AQ96ST3 1273 aa18.55■□□□□ 0.56
ATP2A3-211ENST00000572176 CABP2Q9NPB3 220 aa18.55■□□□□ 0.56
ATP2A3-211ENST00000572176 LMO7Q8WWI1 1683 aa18.54■□□□□ 0.56
ATP2A3-211ENST00000572176 A0A0G2JS52 829 aa18.54■□□□□ 0.56
ATP2A3-211ENST00000572176 MYT1Q01538 1121 aa18.54■□□□□ 0.56
ATP2A3-211ENST00000572176 BRD4O60885 1362 aaPredicted RBP18.54■□□□□ 0.56
ATP2A3-211ENST00000572176 CHRNA2Q15822 529 aa18.53■□□□□ 0.56
ATP2A3-211ENST00000572176 DEFB132Q7Z7B7 95 aa18.53■□□□□ 0.56
ATP2A3-211ENST00000572176 CPDO75976 1380 aa18.53■□□□□ 0.56
ATP2A3-211ENST00000572176 SPATA31A1Q5TZJ5 1347 aa18.52■□□□□ 0.56
ATP2A3-211ENST00000572176 USP6P35125 1406 aa18.52■□□□□ 0.56
ATP2A3-211ENST00000572176 ZC3H6P61129 1189 aaKnown RBP18.52■□□□□ 0.56
ATP2A3-211ENST00000572176 ABTB2Q8N961 1025 aa18.52■□□□□ 0.56
ATP2A3-211ENST00000572176 SSH2Q76I76 1423 aa18.51■□□□□ 0.55
ATP2A3-211ENST00000572176 SF3B2Q13435 895 aaKnown RBP18.51■□□□□ 0.55
ATP2A3-211ENST00000572176 ROCK2O75116 1388 aaKnown RBP18.51■□□□□ 0.55
ATP2A3-211ENST00000572176 RGPD1P0DJD0 1748 aa18.51■□□□□ 0.55
ATP2A3-211ENST00000572176 CAMTA1Q9Y6Y1 1673 aa18.5■□□□□ 0.55
ATP2A3-211ENST00000572176 SLIT3O75094 1523 aa18.49■□□□□ 0.55
ATP2A3-211ENST00000572176 NEUROD1Q13562 356 aa18.48■□□□□ 0.55
ATP2A3-211ENST00000572176 NLRP13Q86W25 1043 aa18.48■□□□□ 0.55
ATP2A3-211ENST00000572176 STRN4Q9NRL3 753 aa18.48■□□□□ 0.55
ATP2A3-211ENST00000572176 CABP1Q9NZU7 370 aa18.48■□□□□ 0.55
ATP2A3-211ENST00000572176 TNS1Q9HBL0 1735 aaKnown RBP18.48■□□□□ 0.55
ATP2A3-211ENST00000572176 EVC2Q86UK5 1308 aa18.48■□□□□ 0.55
ATP2A3-211ENST00000572176 PIK3C2AO00443 1686 aa18.47■□□□□ 0.55
ATP2A3-211ENST00000572176 DISP2A7MBM2 1401 aa18.46■□□□□ 0.55
ATP2A3-211ENST00000572176 COL5A2P05997 1499 aaPredicted RBP18.46■□□□□ 0.54
ATP2A3-211ENST00000572176 AKAP12Q02952 1782 aa18.45■□□□□ 0.54
ATP2A3-211ENST00000572176 GCP02774 474 aa18.45■□□□□ 0.54
ATP2A3-211ENST00000572176 BAG6P46379 1132 aa18.45■□□□□ 0.54
ATP2A3-211ENST00000572176 FAM182BQ5T319 152 aa18.45■□□□□ 0.54
ATP2A3-211ENST00000572176 BARGINQ6ZT62 677 aa18.44■□□□□ 0.54
ATP2A3-211ENST00000572176 LARP1Q6PKG0 1096 aaKnown RBP18.43■□□□□ 0.54
ATP2A3-211ENST00000572176 SBNO2Q9Y2G9 1366 aa18.42■□□□□ 0.54
ATP2A3-211ENST00000572176 EVA1CP58658 441 aa18.42■□□□□ 0.54
ATP2A3-211ENST00000572176 PARP4Q9UKK3 1724 aaKnown RBP18.41■□□□□ 0.54
ATP2A3-211ENST00000572176 USP35Q9P2H5 1018 aa18.41■□□□□ 0.54
ATP2A3-211ENST00000572176 CPSF1Q10570 1443 aaKnown RBP18.4■□□□□ 0.54
ATP2A3-211ENST00000572176 COL18A1P39060 1754 aa18.4■□□□□ 0.54
ATP2A3-211ENST00000572176 NLRP6P59044 892 aa18.4■□□□□ 0.54
ATP2A3-211ENST00000572176 TCP11L2Q8N4U5 519 aa18.4■□□□□ 0.54
ATP2A3-211ENST00000572176 LRP5O75197 1615 aa18.4■□□□□ 0.54
ATP2A3-211ENST00000572176 AATKQ6ZMQ8 1374 aa18.4■□□□□ 0.54
ATP2A3-211ENST00000572176 EN1Q05925 392 aaPredicted RBP18.39■□□□□ 0.53
ATP2A3-211ENST00000572176 THRAP3Q9Y2W1 955 aaKnown RBP18.39■□□□□ 0.53
ATP2A3-211ENST00000572176 MON2Q7Z3U7 1717 aa18.39■□□□□ 0.53
ATP2A3-211ENST00000572176 CRB1P82279 1406 aa18.39■□□□□ 0.53
ATP2A3-211ENST00000572176 FAM196AQ6ZSG2 479 aa18.38■□□□□ 0.53
ATP2A3-211ENST00000572176 ZNF692Q9BU19 519 aaPredicted RBP18.38■□□□□ 0.53
ATP2A3-211ENST00000572176 TTC21BQ7Z4L5 1316 aa18.38■□□□□ 0.53
ATP2A3-211ENST00000572176 LRRC37A3O60309 1634 aa18.36■□□□□ 0.53
ATP2A3-211ENST00000572176 NFAT5O94916 1531 aa18.36■□□□□ 0.53
ATP2A3-211ENST00000572176 TTC21AQ8NDW8 1320 aa18.36■□□□□ 0.53
ATP2A3-211ENST00000572176 WNK3Q9BYP7 1800 aa18.36■□□□□ 0.53
ATP2A3-211ENST00000572176 USP54Q70EL1 1684 aa18.35■□□□□ 0.53
ATP2A3-211ENST00000572176 TONSLQ96HA7 1378 aa18.35■□□□□ 0.53
ATP2A3-211ENST00000572176 TRIM37O94972 964 aa18.35■□□□□ 0.53
ATP2A3-211ENST00000572176 CARD11Q9BXL7 1154 aa18.35■□□□□ 0.53
ATP2A3-211ENST00000572176 RREB1Q92766 1687 aa18.34■□□□□ 0.53
ATP2A3-211ENST00000572176 CD163L1Q9NR16 1453 aa18.34■□□□□ 0.53
ATP2A3-211ENST00000572176 KTN1Q86UP2 1357 aaKnown RBP18.34■□□□□ 0.53
ATP2A3-211ENST00000572176 ZBTB7CA1YPR0 619 aa18.34■□□□□ 0.53
ATP2A3-211ENST00000572176 PDE3BQ13370 1112 aa18.34■□□□□ 0.53
ATP2A3-211ENST00000572176 PEAK1Q9H792 1746 aa18.34■□□□□ 0.53
ATP2A3-211ENST00000572176 ABCC6O95255 1503 aa18.33■□□□□ 0.53
ATP2A3-211ENST00000572176 PARD3Q8TEW0 1356 aa18.33■□□□□ 0.53
ATP2A3-211ENST00000572176 PSDA5PKW4 1024 aaPredicted RBP18.32■□□□□ 0.52
ATP2A3-211ENST00000572176 EZH2Q15910 746 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms