RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 STRCQ7RTU9 1775 aa8.18□□□□□ -1.1
TRAPPC1-204ENST00000571947 XIRP1Q702N8 1843 aaKnown RBP8.18□□□□□ -1.1
TRAPPC1-204ENST00000571947 PLEKHG3A1L390 1219 aa8.18□□□□□ -1.1
TRAPPC1-204ENST00000571947 MTHFSP49914 203 aa8.18□□□□□ -1.1
TRAPPC1-204ENST00000571947 PDE3BQ13370 1112 aa8.18□□□□□ -1.1
TRAPPC1-204ENST00000571947 CFAP53Q96M91 514 aa8.18□□□□□ -1.1
TRAPPC1-204ENST00000571947 ZNF692Q9BU19 519 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC1-204ENST00000571947 GGNBP2Q9H3C7 697 aa8.18□□□□□ -1.1
TRAPPC1-204ENST00000571947 NUDCQ9Y266 331 aa8.18□□□□□ -1.1
TRAPPC1-204ENST00000571947 PIK3C2AO00443 1686 aa8.18□□□□□ -1.1
TRAPPC1-204ENST00000571947 NEFLP07196 543 aa8.17□□□□□ -1.1
TRAPPC1-204ENST00000571947 KCNA6P17658 529 aa8.17□□□□□ -1.1
TRAPPC1-204ENST00000571947 TNNT2P45379 298 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC1-204ENST00000571947 LTN1O94822 1766 aa8.16□□□□□ -1.1
TRAPPC1-204ENST00000571947 USP6P35125 1406 aa8.16□□□□□ -1.1
TRAPPC1-204ENST00000571947 NCKAP5LQ9HCH0 1330 aa8.16□□□□□ -1.1
TRAPPC1-204ENST00000571947 SUPT16HQ9Y5B9 1047 aaKnown RBP8.16□□□□□ -1.1
TRAPPC1-204ENST00000571947 KIF1AQ12756 1690 aa8.15□□□□□ -1.1
TRAPPC1-204ENST00000571947 SSH2Q76I76 1423 aa8.15□□□□□ -1.1
TRAPPC1-204ENST00000571947 ADGRL3Q9HAR2 1447 aa8.15□□□□□ -1.1
TRAPPC1-204ENST00000571947 ACEP12821 1306 aa8.15□□□□□ -1.1
TRAPPC1-204ENST00000571947 SENP3-EIF4A1A0A087X0R7 540 aa8.15□□□□□ -1.1
TRAPPC1-204ENST00000571947 FKBP8Q14318 412 aa8.15□□□□□ -1.1
TRAPPC1-204ENST00000571947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.15□□□□□ -1.1
TRAPPC1-204ENST00000571947 NGEFQ8N5V2 710 aa8.15□□□□□ -1.1
TRAPPC1-204ENST00000571947 LRRC7Q96NW7 1537 aa8.14□□□□□ -1.11
TRAPPC1-204ENST00000571947 IQSEC2Q5JU85 1478 aa8.14□□□□□ -1.11
TRAPPC1-204ENST00000571947 CDK12Q9NYV4 1490 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC1-204ENST00000571947 AATKQ6ZMQ8 1374 aa8.14□□□□□ -1.11
TRAPPC1-204ENST00000571947 PNPLA6Q8IY17 1366 aa8.14□□□□□ -1.11
TRAPPC1-204ENST00000571947 RGPD1P0DJD0 1748 aa8.14□□□□□ -1.11
TRAPPC1-204ENST00000571947 PEAK1Q9H792 1746 aa8.14□□□□□ -1.11
TRAPPC1-204ENST00000571947 OVOS2A0A0J9YW53 1432 aa8.13□□□□□ -1.11
TRAPPC1-204ENST00000571947 OVOS2Q6IE36 1432 aa8.13□□□□□ -1.11
TRAPPC1-204ENST00000571947 TTC21BQ7Z4L5 1316 aa8.13□□□□□ -1.11
TRAPPC1-204ENST00000571947 ZNF521Q96K83 1311 aa8.13□□□□□ -1.11
TRAPPC1-204ENST00000571947 DCAF8L1A6NGE4 600 aa8.13□□□□□ -1.11
TRAPPC1-204ENST00000571947 NME9Q86XW9 330 aa8.13□□□□□ -1.11
TRAPPC1-204ENST00000571947 CCDC146Q8IYE0 955 aa8.13□□□□□ -1.11
TRAPPC1-204ENST00000571947 SALL2Q9Y467 1007 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC1-204ENST00000571947 TRPM3Q9HCF6 1732 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC1-204ENST00000571947 RNF123Q5XPI4 1314 aa8.12□□□□□ -1.11
TRAPPC1-204ENST00000571947 TTC21AQ8NDW8 1320 aa8.12□□□□□ -1.11
TRAPPC1-204ENST00000571947 NUTM2FA1L443 756 aa8.12□□□□□ -1.11
TRAPPC1-204ENST00000571947 APAF1O14727 1248 aa8.12□□□□□ -1.11
TRAPPC1-204ENST00000571947 NPM3O75607 178 aaKnown RBP8.12□□□□□ -1.11
TRAPPC1-204ENST00000571947 RUNDC1Q96C34 613 aa8.12□□□□□ -1.11
TRAPPC1-204ENST00000571947 COG3Q96JB2 828 aa8.12□□□□□ -1.11
TRAPPC1-204ENST00000571947 ZRANB1Q9UGI0 708 aa8.12□□□□□ -1.11
TRAPPC1-204ENST00000571947 VIRMAQ69YN4 1812 aaKnown RBP8.12□□□□□ -1.11
TRAPPC1-204ENST00000571947 USP31Q70CQ4 1352 aa8.11□□□□□ -1.11
TRAPPC1-204ENST00000571947 ERICH6BQ5W0A0 696 aa8.11□□□□□ -1.11
TRAPPC1-204ENST00000571947 CDCA7LQ96GN5 454 aa8.11□□□□□ -1.11
TRAPPC1-204ENST00000571947 POLKQ9UBT6 870 aa8.11□□□□□ -1.11
TRAPPC1-204ENST00000571947 LMTK3Q96Q04 1460 aa8.11□□□□□ -1.11
TRAPPC1-204ENST00000571947 RGPD5Q99666 1765 aa8.1□□□□□ -1.11
TRAPPC1-204ENST00000571947 KDM4FA0A1W2PPD8 638 aa8.1□□□□□ -1.11
TRAPPC1-204ENST00000571947 DIAPH1O60610 1272 aaKnown RBP8.1□□□□□ -1.11
TRAPPC1-204ENST00000571947 NGDNQ8NEJ9 315 aaKnown RBP8.1□□□□□ -1.11
TRAPPC1-204ENST00000571947 PMFBP1Q8TBY8 1022 aa8.1□□□□□ -1.11
TRAPPC1-204ENST00000571947 PHRF1Q9P1Y6 1649 aaKnown RBP8.1□□□□□ -1.11
TRAPPC1-204ENST00000571947 RGPD2P0DJD1 1756 aa8.1□□□□□ -1.11
TRAPPC1-204ENST00000571947 ALS2Q96Q42 1657 aa8.09□□□□□ -1.11
TRAPPC1-204ENST00000571947 U2AF1L5P0DN76 240 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC1-204ENST00000571947 U2AF1Q01081 240 aaKnown RBP eCLIP8.09□□□□□ -1.11
TRAPPC1-204ENST00000571947 GOLGA2Q08379 1002 aa8.09□□□□□ -1.11
TRAPPC1-204ENST00000571947 SLFN5Q08AF3 891 aa8.09□□□□□ -1.11
TRAPPC1-204ENST00000571947 TRMT2AQ8IZ69 625 aaKnown RBP8.09□□□□□ -1.11
TRAPPC1-204ENST00000571947 FBLN1P23142 703 aa8.08□□□□□ -1.12
TRAPPC1-204ENST00000571947 PROSER2Q86WR7 435 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC1-204ENST00000571947 TCP11L2Q8N4U5 519 aa8.08□□□□□ -1.12
TRAPPC1-204ENST00000571947 PNNQ9H307 717 aaKnown RBP8.08□□□□□ -1.12
TRAPPC1-204ENST00000571947 RCAN3Q9UKA8 241 aa8.08□□□□□ -1.12
TRAPPC1-204ENST00000571947 PHF8Q9UPP1 1060 aa8.08□□□□□ -1.12
TRAPPC1-204ENST00000571947 EMILIN1Q9Y6C2 1016 aa8.08□□□□□ -1.12
TRAPPC1-204ENST00000571947 NCOA3Q9Y6Q9 1424 aa8.08□□□□□ -1.12
TRAPPC1-204ENST00000571947 U2SURPO15042 1029 aaKnown RBP8.07□□□□□ -1.12
TRAPPC1-204ENST00000571947 CCDC27Q2M243 656 aa8.07□□□□□ -1.12
TRAPPC1-204ENST00000571947 DUSP27Q5VZP5 1158 aa8.07□□□□□ -1.12
TRAPPC1-204ENST00000571947 PLEKHF1Q96S99 279 aa8.07□□□□□ -1.12
TRAPPC1-204ENST00000571947 DCCP43146 1447 aa8.06□□□□□ -1.12
TRAPPC1-204ENST00000571947 E9PSI1 815 aa8.06□□□□□ -1.12
TRAPPC1-204ENST00000571947 PPM1GO15355 546 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC1-204ENST00000571947 FCHSD2O94868 740 aa8.06□□□□□ -1.12
TRAPPC1-204ENST00000571947 IL13P35225 146 aa8.06□□□□□ -1.12
TRAPPC1-204ENST00000571947 IRX6P78412 446 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC1-204ENST00000571947 C14orf37Q86TY3 774 aa8.06□□□□□ -1.12
TRAPPC1-204ENST00000571947 WDR63Q8IWG1 891 aa8.06□□□□□ -1.12
TRAPPC1-204ENST00000571947 WWC1Q8IX03 1113 aa8.06□□□□□ -1.12
TRAPPC1-204ENST00000571947 RBM33Q96EV2 1170 aaKnown RBP8.06□□□□□ -1.12
TRAPPC1-204ENST00000571947 CRYBG1Q9Y4K1 1723 aa8.06□□□□□ -1.12
TRAPPC1-204ENST00000571947 MAPK8IP3Q9UPT6 1336 aa8.05□□□□□ -1.12
TRAPPC1-204ENST00000571947 NFAT5O94916 1531 aa8.05□□□□□ -1.12
TRAPPC1-204ENST00000571947 CACNA1FO60840 1977 aa8.05□□□□□ -1.12
TRAPPC1-204ENST00000571947 TMPOP42166 694 aaKnown RBP8.05□□□□□ -1.12
TRAPPC1-204ENST00000571947 HSPA2P54652 639 aa8.05□□□□□ -1.12
TRAPPC1-204ENST00000571947 RRP1P56182 461 aaKnown RBP8.05□□□□□ -1.12
TRAPPC1-204ENST00000571947 RRS1Q15050 365 aaKnown RBP8.05□□□□□ -1.12
TRAPPC1-204ENST00000571947 RSPH6AQ9H0K4 717 aa8.05□□□□□ -1.12
TRAPPC1-204ENST00000571947 C19orf44Q9H6X5 657 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms