RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 CCDC9Q9Y3X0 531 aaKnown RBP24.06■■□□□ 1.44
RAB40B-205ENST00000571880 NUDT16Q96DE0 195 aaKnown RBP24.04■■□□□ 1.44
RAB40B-205ENST00000571880 CDK19Q9BWU1 502 aa24.03■■□□□ 1.44
RAB40B-205ENST00000571880 SIN3AQ96ST3 1273 aa24.02■■□□□ 1.44
RAB40B-205ENST00000571880 FAM83GA6ND36 823 aa24.01■■□□□ 1.43
RAB40B-205ENST00000571880 NUTM2GQ5VZR2 741 aa23.99■■□□□ 1.43
RAB40B-205ENST00000571880 VPS72Q15906 364 aa23.98■■□□□ 1.43
RAB40B-205ENST00000571880 NRKQ7Z2Y5 1582 aa23.98■■□□□ 1.43
RAB40B-205ENST00000571880 A0A0G2JS52 829 aa23.97■■□□□ 1.43
RAB40B-205ENST00000571880 MYT1Q01538 1121 aa23.97■■□□□ 1.43
RAB40B-205ENST00000571880 NEUROD1Q13562 356 aa23.97■■□□□ 1.43
RAB40B-205ENST00000571880 L3MBTL2Q969R5 705 aa23.97■■□□□ 1.43
RAB40B-205ENST00000571880 BTG4Q9NY30 223 aa23.97■■□□□ 1.43
RAB40B-205ENST00000571880 SEPT12Q8IYM1 358 aa23.96■■□□□ 1.43
RAB40B-205ENST00000571880 ACEP12821 1306 aa23.95■■□□□ 1.42
RAB40B-205ENST00000571880 CENPJQ9HC77 1338 aaPredicted RBP23.95■■□□□ 1.42
RAB40B-205ENST00000571880 PPIP5K1Q6PFW1 1433 aa23.93■■□□□ 1.42
RAB40B-205ENST00000571880 POLR3AO14802 1390 aaPredicted RBP23.93■■□□□ 1.42
RAB40B-205ENST00000571880 SRPK2P78362 688 aaKnown RBP23.93■■□□□ 1.42
RAB40B-205ENST00000571880 CABP2Q9NPB3 220 aa23.93■■□□□ 1.42
RAB40B-205ENST00000571880 KIAA0232Q92628 1395 aa23.92■■□□□ 1.42
RAB40B-205ENST00000571880 PRDM11Q9NQV5 511 aa23.92■■□□□ 1.42
RAB40B-205ENST00000571880 CHRNA2Q15822 529 aa23.91■■□□□ 1.42
RAB40B-205ENST00000571880 FAM98CQ17RN3 349 aaKnown RBP23.91■■□□□ 1.42
RAB40B-205ENST00000571880 THSD7AQ9UPZ6 1657 aa23.9■■□□□ 1.42
RAB40B-205ENST00000571880 CCDC61Q9Y6R9 512 aa23.89■■□□□ 1.41
RAB40B-205ENST00000571880 ZC3H6P61129 1189 aaKnown RBP23.88■■□□□ 1.41
RAB40B-205ENST00000571880 NBPF8Q3BBV2 869 aa23.88■■□□□ 1.41
RAB40B-205ENST00000571880 BLMP54132 1417 aaPredicted RBP23.87■■□□□ 1.41
RAB40B-205ENST00000571880 AKAP12Q02952 1782 aa23.87■■□□□ 1.41
RAB40B-205ENST00000571880 ROCK2O75116 1388 aaKnown RBP23.87■■□□□ 1.41
RAB40B-205ENST00000571880 KRT27Q7Z3Y8 459 aa23.86■■□□□ 1.41
RAB40B-205ENST00000571880 STRN4Q9NRL3 753 aa23.86■■□□□ 1.41
RAB40B-205ENST00000571880 PIK3C2AO00443 1686 aa23.86■■□□□ 1.41
RAB40B-205ENST00000571880 LMO7Q8WWI1 1683 aa23.86■■□□□ 1.41
RAB40B-205ENST00000571880 DEFB132Q7Z7B7 95 aa23.85■■□□□ 1.41
RAB40B-205ENST00000571880 RGPD1P0DJD0 1748 aa23.84■■□□□ 1.41
RAB40B-205ENST00000571880 PLEKHG3A1L390 1219 aa23.84■■□□□ 1.41
RAB40B-205ENST00000571880 FAM182BQ5T319 152 aa23.84■■□□□ 1.41
RAB40B-205ENST00000571880 ABTB2Q8N961 1025 aa23.83■■□□□ 1.41
RAB40B-205ENST00000571880 TNS1Q9HBL0 1735 aaKnown RBP23.83■■□□□ 1.41
RAB40B-205ENST00000571880 SPATA31A5Q5VU36 1347 aa23.83■■□□□ 1.4
RAB40B-205ENST00000571880 SPATA31A7Q8IWB4 1347 aa23.83■■□□□ 1.4
RAB40B-205ENST00000571880 CAMTA1Q9Y6Y1 1673 aa23.81■■□□□ 1.4
RAB40B-205ENST00000571880 ZBTB7CA1YPR0 619 aa23.8■■□□□ 1.4
RAB40B-205ENST00000571880 ONECUT3O60422 494 aaPredicted RBP23.8■■□□□ 1.4
RAB40B-205ENST00000571880 USP6P35125 1406 aa23.8■■□□□ 1.4
RAB40B-205ENST00000571880 RGPD5Q99666 1765 aa23.8■■□□□ 1.4
RAB40B-205ENST00000571880 CCDC125Q86Z20 511 aa23.79■■□□□ 1.4
RAB40B-205ENST00000571880 CABP1Q9NZU7 370 aa23.79■■□□□ 1.4
RAB40B-205ENST00000571880 USP35Q9P2H5 1018 aa23.79■■□□□ 1.4
RAB40B-205ENST00000571880 USP19O94966 1318 aa23.79■■□□□ 1.4
RAB40B-205ENST00000571880 SSH2Q76I76 1423 aa23.78■■□□□ 1.4
RAB40B-205ENST00000571880 ZRANB1Q9UGI0 708 aa23.78■■□□□ 1.4
RAB40B-205ENST00000571880 SF3B2Q13435 895 aaKnown RBP23.77■■□□□ 1.4
RAB40B-205ENST00000571880 MON2Q7Z3U7 1717 aa23.76■■□□□ 1.39
RAB40B-205ENST00000571880 SPATA31A1Q5TZJ5 1347 aa23.76■■□□□ 1.39
RAB40B-205ENST00000571880 EVC2Q86UK5 1308 aa23.76■■□□□ 1.39
RAB40B-205ENST00000571880 SLIT3O75094 1523 aa23.75■■□□□ 1.39
RAB40B-205ENST00000571880 WNK3Q9BYP7 1800 aa23.75■■□□□ 1.39
RAB40B-205ENST00000571880 NLRP13Q86W25 1043 aa23.72■■□□□ 1.39
RAB40B-205ENST00000571880 COL18A1P39060 1754 aa23.72■■□□□ 1.39
RAB40B-205ENST00000571880 COL5A2P05997 1499 aaPredicted RBP23.71■■□□□ 1.39
RAB40B-205ENST00000571880 CPDO75976 1380 aa23.71■■□□□ 1.39
RAB40B-205ENST00000571880 EVA1CP58658 441 aa23.71■■□□□ 1.39
RAB40B-205ENST00000571880 LARP1Q6PKG0 1096 aaKnown RBP23.71■■□□□ 1.39
RAB40B-205ENST00000571880 TONSLQ96HA7 1378 aa23.7■■□□□ 1.38
RAB40B-205ENST00000571880 GCP02774 474 aa23.7■■□□□ 1.38
RAB40B-205ENST00000571880 NLRP6P59044 892 aa23.7■■□□□ 1.38
RAB40B-205ENST00000571880 PARP4Q9UKK3 1724 aaKnown RBP23.7■■□□□ 1.38
RAB40B-205ENST00000571880 SOX12O15370 315 aa23.68■■□□□ 1.38
RAB40B-205ENST00000571880 LRRC37A3O60309 1634 aa23.67■■□□□ 1.38
RAB40B-205ENST00000571880 CARD11Q9BXL7 1154 aa23.66■■□□□ 1.38
RAB40B-205ENST00000571880 BRD4O60885 1362 aaPredicted RBP23.65■■□□□ 1.38
RAB40B-205ENST00000571880 LTN1O94822 1766 aa23.65■■□□□ 1.38
RAB40B-205ENST00000571880 BAG6P46379 1132 aa23.65■■□□□ 1.38
RAB40B-205ENST00000571880 EN1Q05925 392 aaPredicted RBP23.64■■□□□ 1.37
RAB40B-205ENST00000571880 TTC21BQ7Z4L5 1316 aa23.63■■□□□ 1.37
RAB40B-205ENST00000571880 PSDA5PKW4 1024 aaPredicted RBP23.63■■□□□ 1.37
RAB40B-205ENST00000571880 SRCAPQ6ZRS2 3230 aa23.63■■□□□ 1.37
RAB40B-205ENST00000571880 KTN1Q86UP2 1357 aaKnown RBP23.63■■□□□ 1.37
RAB40B-205ENST00000571880 CPSF1Q10570 1443 aaKnown RBP23.62■■□□□ 1.37
RAB40B-205ENST00000571880 NFAT5O94916 1531 aa23.62■■□□□ 1.37
RAB40B-205ENST00000571880 SBF2Q86WG5 1849 aa23.61■■□□□ 1.37
RAB40B-205ENST00000571880 TRIM37O94972 964 aa23.61■■□□□ 1.37
RAB40B-205ENST00000571880 TCP11L2Q8N4U5 519 aa23.61■■□□□ 1.37
RAB40B-205ENST00000571880 RREB1Q92766 1687 aa23.6■■□□□ 1.37
RAB40B-205ENST00000571880 CRB1P82279 1406 aa23.6■■□□□ 1.37
RAB40B-205ENST00000571880 NUP188Q5SRE5 1749 aa23.6■■□□□ 1.37
RAB40B-205ENST00000571880 USP54Q70EL1 1684 aa23.6■■□□□ 1.37
RAB40B-205ENST00000571880 BARGINQ6ZT62 677 aa23.59■■□□□ 1.37
RAB40B-205ENST00000571880 SBNO2Q9Y2G9 1366 aa23.59■■□□□ 1.37
RAB40B-205ENST00000571880 CD163L1Q9NR16 1453 aa23.59■■□□□ 1.37
RAB40B-205ENST00000571880 PEAK1Q9H792 1746 aa23.59■■□□□ 1.37
RAB40B-205ENST00000571880 LRP5O75197 1615 aa23.59■■□□□ 1.37
RAB40B-205ENST00000571880 AATKQ6ZMQ8 1374 aa23.58■■□□□ 1.37
RAB40B-205ENST00000571880 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.58■■□□□ 1.37
RAB40B-205ENST00000571880 PDE3BQ13370 1112 aa23.57■■□□□ 1.36
RAB40B-205ENST00000571880 EZH2Q15910 746 aaKnown RBP23.56■■□□□ 1.36
RAB40B-205ENST00000571880 TMC1Q8TDI8 760 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms