RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 UNC5CLQ8IV45 518 aa19.61■□□□□ 0.73
PRPF8-202ENST00000571346 ATAD2Q6PL18 1390 aa19.6■□□□□ 0.73
PRPF8-202ENST00000571346 SRPK2P78362 688 aaKnown RBP19.6■□□□□ 0.73
PRPF8-202ENST00000571346 PHRF1Q9P1Y6 1649 aaKnown RBP19.59■□□□□ 0.73
PRPF8-202ENST00000571346 GJD4Q96KN9 370 aaPredicted RBP19.59■□□□□ 0.73
PRPF8-202ENST00000571346 NRAPQ86VF7 1730 aa19.59■□□□□ 0.73
PRPF8-202ENST00000571346 COL14A1Q05707 1796 aaKnown RBP19.58■□□□□ 0.73
PRPF8-202ENST00000571346 PPIP5K1Q6PFW1 1433 aa19.58■□□□□ 0.72
PRPF8-202ENST00000571346 CCDC9Q9Y3X0 531 aaKnown RBP19.57■□□□□ 0.72
PRPF8-202ENST00000571346 POLR3AO14802 1390 aaPredicted RBP19.57■□□□□ 0.72
PRPF8-202ENST00000571346 ACEP12821 1306 aa19.56■□□□□ 0.72
PRPF8-202ENST00000571346 CCDC61Q9Y6R9 512 aa19.56■□□□□ 0.72
PRPF8-202ENST00000571346 CABP2Q9NPB3 220 aa19.55■□□□□ 0.72
PRPF8-202ENST00000571346 TONSLQ96HA7 1378 aa19.54■□□□□ 0.72
PRPF8-202ENST00000571346 FAM83GA6ND36 823 aa19.53■□□□□ 0.72
PRPF8-202ENST00000571346 NUTM2GQ5VZR2 741 aa19.53■□□□□ 0.72
PRPF8-202ENST00000571346 TRIM26Q12899 539 aaPredicted RBP19.52■□□□□ 0.72
PRPF8-202ENST00000571346 VPS72Q15906 364 aa19.52■□□□□ 0.72
PRPF8-202ENST00000571346 NRKQ7Z2Y5 1582 aa19.52■□□□□ 0.71
PRPF8-202ENST00000571346 BRWD3Q6RI45 1802 aa19.51■□□□□ 0.71
PRPF8-202ENST00000571346 NBPF8Q3BBV2 869 aa19.51■□□□□ 0.71
PRPF8-202ENST00000571346 PRDM11Q9NQV5 511 aa19.51■□□□□ 0.71
PRPF8-202ENST00000571346 BTG4Q9NY30 223 aa19.51■□□□□ 0.71
PRPF8-202ENST00000571346 A0A0G2JS52 829 aa19.5■□□□□ 0.71
PRPF8-202ENST00000571346 PLEKHG3A1L390 1219 aa19.5■□□□□ 0.71
PRPF8-202ENST00000571346 MYT1Q01538 1121 aa19.5■□□□□ 0.71
PRPF8-202ENST00000571346 KIAA0232Q92628 1395 aa19.49■□□□□ 0.71
PRPF8-202ENST00000571346 EVC2Q86UK5 1308 aa19.49■□□□□ 0.71
PRPF8-202ENST00000571346 ABTB2Q8N961 1025 aa19.47■□□□□ 0.71
PRPF8-202ENST00000571346 SEPT12Q8IYM1 358 aa19.46■□□□□ 0.71
PRPF8-202ENST00000571346 USP6P35125 1406 aa19.45■□□□□ 0.7
PRPF8-202ENST00000571346 CHRNA2Q15822 529 aa19.45■□□□□ 0.7
PRPF8-202ENST00000571346 CABP1Q9NZU7 370 aa19.45■□□□□ 0.7
PRPF8-202ENST00000571346 ZC3H6P61129 1189 aaKnown RBP19.44■□□□□ 0.7
PRPF8-202ENST00000571346 CARD11Q9BXL7 1154 aa19.44■□□□□ 0.7
PRPF8-202ENST00000571346 PIK3C2AO00443 1686 aa19.43■□□□□ 0.7
PRPF8-202ENST00000571346 FAM98CQ17RN3 349 aaKnown RBP19.43■□□□□ 0.7
PRPF8-202ENST00000571346 AKAP12Q02952 1782 aa19.42■□□□□ 0.7
PRPF8-202ENST00000571346 STRN4Q9NRL3 753 aa19.42■□□□□ 0.7
PRPF8-202ENST00000571346 USP19O94966 1318 aa19.42■□□□□ 0.7
PRPF8-202ENST00000571346 BRD4O60885 1362 aaPredicted RBP19.41■□□□□ 0.7
PRPF8-202ENST00000571346 THSD7AQ9UPZ6 1657 aa19.4■□□□□ 0.7
PRPF8-202ENST00000571346 LMO7Q8WWI1 1683 aa19.4■□□□□ 0.7
PRPF8-202ENST00000571346 KRT27Q7Z3Y8 459 aa19.39■□□□□ 0.69
PRPF8-202ENST00000571346 NLRP13Q86W25 1043 aa19.39■□□□□ 0.69
PRPF8-202ENST00000571346 SPATA31A5Q5VU36 1347 aa19.39■□□□□ 0.69
PRPF8-202ENST00000571346 SPATA31A7Q8IWB4 1347 aa19.39■□□□□ 0.69
PRPF8-202ENST00000571346 SBNO2Q9Y2G9 1366 aa19.39■□□□□ 0.69
PRPF8-202ENST00000571346 BLMP54132 1417 aaPredicted RBP19.39■□□□□ 0.69
PRPF8-202ENST00000571346 ZBTB7CA1YPR0 619 aa19.38■□□□□ 0.69
PRPF8-202ENST00000571346 SLIT3O75094 1523 aa19.38■□□□□ 0.69
PRPF8-202ENST00000571346 CPDO75976 1380 aa19.38■□□□□ 0.69
PRPF8-202ENST00000571346 MON2Q7Z3U7 1717 aa19.37■□□□□ 0.69
PRPF8-202ENST00000571346 SSH2Q76I76 1423 aa19.37■□□□□ 0.69
PRPF8-202ENST00000571346 ONECUT3O60422 494 aaPredicted RBP19.36■□□□□ 0.69
PRPF8-202ENST00000571346 NLRP6P59044 892 aa19.36■□□□□ 0.69
PRPF8-202ENST00000571346 CAMTA1Q9Y6Y1 1673 aa19.36■□□□□ 0.69
PRPF8-202ENST00000571346 GCP02774 474 aa19.35■□□□□ 0.69
PRPF8-202ENST00000571346 CCDC125Q86Z20 511 aa19.35■□□□□ 0.69
PRPF8-202ENST00000571346 USP35Q9P2H5 1018 aa19.35■□□□□ 0.69
PRPF8-202ENST00000571346 SRCAPQ6ZRS2 3230 aa19.35■□□□□ 0.69
PRPF8-202ENST00000571346 SPATA31A1Q5TZJ5 1347 aa19.34■□□□□ 0.69
PRPF8-202ENST00000571346 EVA1CP58658 441 aa19.34■□□□□ 0.69
PRPF8-202ENST00000571346 SF3B2Q13435 895 aaKnown RBP19.34■□□□□ 0.69
PRPF8-202ENST00000571346 KTN1Q86UP2 1357 aaKnown RBP19.33■□□□□ 0.69
PRPF8-202ENST00000571346 COL5A2P05997 1499 aaPredicted RBP19.33■□□□□ 0.68
PRPF8-202ENST00000571346 TTC21BQ7Z4L5 1316 aa19.32■□□□□ 0.68
PRPF8-202ENST00000571346 CPSF1Q10570 1443 aaKnown RBP19.32■□□□□ 0.68
PRPF8-202ENST00000571346 RGPD1P0DJD0 1748 aa19.31■□□□□ 0.68
PRPF8-202ENST00000571346 SOX12O15370 315 aa19.31■□□□□ 0.68
PRPF8-202ENST00000571346 TMC1Q8TDI8 760 aa19.31■□□□□ 0.68
PRPF8-202ENST00000571346 FAM182BQ5T319 152 aa19.3■□□□□ 0.68
PRPF8-202ENST00000571346 LARP1Q6PKG0 1096 aaKnown RBP19.3■□□□□ 0.68
PRPF8-202ENST00000571346 ZNF692Q9BU19 519 aaPredicted RBP19.3■□□□□ 0.68
PRPF8-202ENST00000571346 TTC21AQ8NDW8 1320 aa19.29■□□□□ 0.68
PRPF8-202ENST00000571346 DEFB132Q7Z7B7 95 aa19.29■□□□□ 0.68
PRPF8-202ENST00000571346 CD163L1Q9NR16 1453 aa19.28■□□□□ 0.68
PRPF8-202ENST00000571346 NFAT5O94916 1531 aa19.27■□□□□ 0.68
PRPF8-202ENST00000571346 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.27■□□□□ 0.68
PRPF8-202ENST00000571346 ZRANB1Q9UGI0 708 aa19.27■□□□□ 0.68
PRPF8-202ENST00000571346 TNS1Q9HBL0 1735 aaKnown RBP19.27■□□□□ 0.68
PRPF8-202ENST00000571346 AATKQ6ZMQ8 1374 aa19.27■□□□□ 0.68
PRPF8-202ENST00000571346 CRB1P82279 1406 aa19.26■□□□□ 0.67
PRPF8-202ENST00000571346 COL18A1P39060 1754 aa19.25■□□□□ 0.67
PRPF8-202ENST00000571346 USP54Q70EL1 1684 aa19.25■□□□□ 0.67
PRPF8-202ENST00000571346 HDGFL2Q7Z4V5 671 aaPredicted RBP19.25■□□□□ 0.67
PRPF8-202ENST00000571346 TCP11L2Q8N4U5 519 aa19.25■□□□□ 0.67
PRPF8-202ENST00000571346 PCGF6Q9BYE7 350 aa19.25■□□□□ 0.67
PRPF8-202ENST00000571346 PARP4Q9UKK3 1724 aaKnown RBP19.25■□□□□ 0.67
PRPF8-202ENST00000571346 A0A1W2PP64 1363 aa19.24■□□□□ 0.67
PRPF8-202ENST00000571346 USP47Q96K76 1375 aa19.24■□□□□ 0.67
PRPF8-202ENST00000571346 WNK3Q9BYP7 1800 aa19.24■□□□□ 0.67
PRPF8-202ENST00000571346 ST20-MTHFSA0A0A6YYL1 179 aa19.24■□□□□ 0.67
PRPF8-202ENST00000571346 KCNH5Q8NCM2 988 aa19.24■□□□□ 0.67
PRPF8-202ENST00000571346 LRRC37A3O60309 1634 aa19.23■□□□□ 0.67
PRPF8-202ENST00000571346 BAG6P46379 1132 aa19.23■□□□□ 0.67
PRPF8-202ENST00000571346 BARGINQ6ZT62 677 aa19.23■□□□□ 0.67
PRPF8-202ENST00000571346 SLC12A5Q9H2X9 1139 aa19.23■□□□□ 0.67
PRPF8-202ENST00000571346 RGPD5Q99666 1765 aa19.23■□□□□ 0.67
PRPF8-202ENST00000571346 EDC4Q6P2E9 1401 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms