RNA–Protein interactions for RNA: ENST00000571245.5

ATP2A3-209, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 868 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-209ENST00000571245 ABCA3Q99758 1704 aa19.37■□□□□ 0.69
ATP2A3-209ENST00000571245 ATRNO75882 1429 aa19.36■□□□□ 0.69
ATP2A3-209ENST00000571245 PPIP5K1Q6PFW1 1433 aa19.36■□□□□ 0.69
ATP2A3-209ENST00000571245 POLR3AO14802 1390 aaPredicted RBP19.36■□□□□ 0.69
ATP2A3-209ENST00000571245 CABP1Q9NZU7 370 aa19.35■□□□□ 0.69
ATP2A3-209ENST00000571245 CCDC9Q9Y3X0 531 aaKnown RBP19.35■□□□□ 0.69
ATP2A3-209ENST00000571245 QRICH2Q9H0J4 1663 aa19.35■□□□□ 0.69
ATP2A3-209ENST00000571245 RGS12O14924 1447 aa19.34■□□□□ 0.69
ATP2A3-209ENST00000571245 TRPM3Q9HCF6 1732 aaPredicted RBP19.34■□□□□ 0.69
ATP2A3-209ENST00000571245 FAM83GA6ND36 823 aa19.34■□□□□ 0.69
ATP2A3-209ENST00000571245 ABTB2Q8N961 1025 aa19.34■□□□□ 0.69
ATP2A3-209ENST00000571245 SLIT2O94813 1529 aa19.34■□□□□ 0.69
ATP2A3-209ENST00000571245 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.34■□□□□ 0.69
ATP2A3-209ENST00000571245 NUTM2GQ5VZR2 741 aa19.33■□□□□ 0.68
ATP2A3-209ENST00000571245 UPF1Q92900 1129 aaKnown RBP eCLIP19.32■□□□□ 0.682e-7■■□□□ 12.7
ATP2A3-209ENST00000571245 TOPAZ1Q8N9V7 1692 aa19.32■□□□□ 0.68
ATP2A3-209ENST00000571245 ALS2Q96Q42 1657 aa19.31■□□□□ 0.68
ATP2A3-209ENST00000571245 PRDM11Q9NQV5 511 aa19.31■□□□□ 0.68
ATP2A3-209ENST00000571245 BTG4Q9NY30 223 aa19.31■□□□□ 0.68
ATP2A3-209ENST00000571245 VPS72Q15906 364 aa19.3■□□□□ 0.68
ATP2A3-209ENST00000571245 RALGAPBQ86X10 1494 aa19.29■□□□□ 0.68
ATP2A3-209ENST00000571245 ZEB1P37275 1124 aaPredicted RBP19.29■□□□□ 0.68
ATP2A3-209ENST00000571245 NLRP13Q86W25 1043 aa19.29■□□□□ 0.68
ATP2A3-209ENST00000571245 PLCH1Q4KWH8 1693 aa19.29■□□□□ 0.68
ATP2A3-209ENST00000571245 NWD2Q9ULI1 1742 aa19.28■□□□□ 0.68
ATP2A3-209ENST00000571245 BRD4O60885 1362 aaPredicted RBP19.28■□□□□ 0.68
ATP2A3-209ENST00000571245 ATAD2Q6PL18 1390 aa19.28■□□□□ 0.68
ATP2A3-209ENST00000571245 ZC3H6P61129 1189 aaKnown RBP19.27■□□□□ 0.68
ATP2A3-209ENST00000571245 ZNF692Q9BU19 519 aaPredicted RBP19.27■□□□□ 0.68
ATP2A3-209ENST00000571245 A0A0G2JS52 829 aa19.25■□□□□ 0.67
ATP2A3-209ENST00000571245 MYT1Q01538 1121 aa19.25■□□□□ 0.67
ATP2A3-209ENST00000571245 KIAA0232Q92628 1395 aa19.24■□□□□ 0.67
ATP2A3-209ENST00000571245 SBNO2Q9Y2G9 1366 aa19.24■□□□□ 0.67
ATP2A3-209ENST00000571245 NLRP6P59044 892 aa19.24■□□□□ 0.67
ATP2A3-209ENST00000571245 CRYBG1Q9Y4K1 1723 aa19.23■□□□□ 0.67
ATP2A3-209ENST00000571245 SLC24A1O60721 1099 aa19.23■□□□□ 0.67
ATP2A3-209ENST00000571245 CHRNA2Q15822 529 aa19.23■□□□□ 0.67
ATP2A3-209ENST00000571245 SEPT12Q8IYM1 358 aa19.23■□□□□ 0.67
ATP2A3-209ENST00000571245 TMC1Q8TDI8 760 aa19.23■□□□□ 0.67
ATP2A3-209ENST00000571245 USP6P35125 1406 aa19.23■□□□□ 0.67
ATP2A3-209ENST00000571245 EVA1CP58658 441 aa19.22■□□□□ 0.67
ATP2A3-209ENST00000571245 COL14A1Q05707 1796 aaKnown RBP19.21■□□□□ 0.67
ATP2A3-209ENST00000571245 GCP02774 474 aa19.21■□□□□ 0.67
ATP2A3-209ENST00000571245 STRN4Q9NRL3 753 aa19.21■□□□□ 0.67
ATP2A3-209ENST00000571245 ST20-MTHFSA0A0A6YYL1 179 aa19.2■□□□□ 0.66
ATP2A3-209ENST00000571245 GLI3P10071 1580 aa19.19■□□□□ 0.66
ATP2A3-209ENST00000571245 PHRF1Q9P1Y6 1649 aaKnown RBP19.19■□□□□ 0.66
ATP2A3-209ENST00000571245 ZBTB7CA1YPR0 619 aa19.19■□□□□ 0.66
ATP2A3-209ENST00000571245 ONECUT3O60422 494 aaPredicted RBP19.19■□□□□ 0.66
ATP2A3-209ENST00000571245 FAM98CQ17RN3 349 aaKnown RBP19.19■□□□□ 0.66
ATP2A3-209ENST00000571245 USP19O94966 1318 aa19.19■□□□□ 0.66
ATP2A3-209ENST00000571245 KTN1Q86UP2 1357 aaKnown RBP19.19■□□□□ 0.66
ATP2A3-209ENST00000571245 HDGFL2Q7Z4V5 671 aaPredicted RBP19.18■□□□□ 0.66
ATP2A3-209ENST00000571245 TTC21BQ7Z4L5 1316 aa19.18■□□□□ 0.66
ATP2A3-209ENST00000571245 CCDC125Q86Z20 511 aa19.17■□□□□ 0.66
ATP2A3-209ENST00000571245 SPATA31A5Q5VU36 1347 aa19.17■□□□□ 0.66
ATP2A3-209ENST00000571245 SPATA31A7Q8IWB4 1347 aa19.17■□□□□ 0.66
ATP2A3-209ENST00000571245 TTC21AQ8NDW8 1320 aa19.17■□□□□ 0.66
ATP2A3-209ENST00000571245 NRAPQ86VF7 1730 aa19.17■□□□□ 0.66
ATP2A3-209ENST00000571245 KRT27Q7Z3Y8 459 aa19.16■□□□□ 0.66
ATP2A3-209ENST00000571245 PUS7Q96PZ0 661 aaKnown RBP19.16■□□□□ 0.66
ATP2A3-209ENST00000571245 TERF2IPQ9NYB0 399 aa19.16■□□□□ 0.66
ATP2A3-209ENST00000571245 CPDO75976 1380 aa19.16■□□□□ 0.66
ATP2A3-209ENST00000571245 KCNH5Q8NCM2 988 aa19.15■□□□□ 0.66
ATP2A3-209ENST00000571245 USP47Q96K76 1375 aa19.15■□□□□ 0.66
ATP2A3-209ENST00000571245 SSH2Q76I76 1423 aa19.15■□□□□ 0.66
ATP2A3-209ENST00000571245 BRWD3Q6RI45 1802 aa19.14■□□□□ 0.65
ATP2A3-209ENST00000571245 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.14■□□□□ 0.65
ATP2A3-209ENST00000571245 SLC12A5Q9H2X9 1139 aa19.14■□□□□ 0.65
ATP2A3-209ENST00000571245 USP35Q9P2H5 1018 aa19.14■□□□□ 0.65
ATP2A3-209ENST00000571245 CPSF1Q10570 1443 aaKnown RBP19.14■□□□□ 0.65
ATP2A3-209ENST00000571245 TESK2Q96S53 571 aa19.13■□□□□ 0.65
ATP2A3-209ENST00000571245 AKAP12Q02952 1782 aa19.12■□□□□ 0.65
ATP2A3-209ENST00000571245 NRKQ7Z2Y5 1582 aa19.12■□□□□ 0.65
ATP2A3-209ENST00000571245 SPATA31A1Q5TZJ5 1347 aa19.12■□□□□ 0.65
ATP2A3-209ENST00000571245 SOX12O15370 315 aa19.12■□□□□ 0.65
ATP2A3-209ENST00000571245 TMF1P82094 1093 aa19.12■□□□□ 0.65
ATP2A3-209ENST00000571245 SF3B2Q13435 895 aaKnown RBP19.12■□□□□ 0.65
ATP2A3-209ENST00000571245 EIF4G2P78344 907 aaKnown RBP eCLIP19.1■□□□□ 0.65
ATP2A3-209ENST00000571245 LARP1Q6PKG0 1096 aaKnown RBP19.1■□□□□ 0.65
ATP2A3-209ENST00000571245 NINLQ9Y2I6 1382 aa19.08■□□□□ 0.65
ATP2A3-209ENST00000571245 CDCA8Q53HL2 280 aa19.08■□□□□ 0.64
ATP2A3-209ENST00000571245 TCP11L2Q8N4U5 519 aa19.08■□□□□ 0.64
ATP2A3-209ENST00000571245 CAMTA1Q9Y6Y1 1673 aa19.08■□□□□ 0.64
ATP2A3-209ENST00000571245 AATKQ6ZMQ8 1374 aa19.07■□□□□ 0.64
ATP2A3-209ENST00000571245 SLIT3O75094 1523 aa19.07■□□□□ 0.64
ATP2A3-209ENST00000571245 HSPA5P11021 654 aaKnown RBP19.07■□□□□ 0.64
ATP2A3-209ENST00000571245 BLMP54132 1417 aaPredicted RBP19.07■□□□□ 0.64
ATP2A3-209ENST00000571245 PIK3C2AO00443 1686 aa19.06■□□□□ 0.64
ATP2A3-209ENST00000571245 BARGINQ6ZT62 677 aa19.06■□□□□ 0.64
ATP2A3-209ENST00000571245 NME9Q86XW9 330 aa19.06■□□□□ 0.64
ATP2A3-209ENST00000571245 PDE3BQ13370 1112 aa19.05■□□□□ 0.64
ATP2A3-209ENST00000571245 TOM1L2Q6ZVM7 507 aa19.05■□□□□ 0.64
ATP2A3-209ENST00000571245 ARHGEF25Q86VW2 580 aa19.05■□□□□ 0.64
ATP2A3-209ENST00000571245 THRAP3Q9Y2W1 955 aaKnown RBP19.05■□□□□ 0.64
ATP2A3-209ENST00000571245 EDC4Q6P2E9 1401 aaKnown RBP19.05■□□□□ 0.64
ATP2A3-209ENST00000571245 A0A1W2PP64 1363 aa19.05■□□□□ 0.64
ATP2A3-209ENST00000571245 CD163L1Q9NR16 1453 aa19.04■□□□□ 0.64
ATP2A3-209ENST00000571245 CSB-PGBD3P0DP91 1061 aa19.04■□□□□ 0.64
ATP2A3-209ENST00000571245 MON2Q7Z3U7 1717 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms