RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 UNC5CLQ8IV45 518 aa21.72■■□□□ 1.07
RAB40B-203ENST00000570676 NGDNQ8NEJ9 315 aaKnown RBP21.72■■□□□ 1.07
RAB40B-203ENST00000570676 CCER1Q8TC90 406 aaPredicted RBP21.72■■□□□ 1.07
RAB40B-203ENST00000570676 PLEKHG5O94827 1062 aa21.71■■□□□ 1.07
RAB40B-203ENST00000570676 HAP1P54257 671 aaPredicted RBP21.71■■□□□ 1.07
RAB40B-203ENST00000570676 NEUROD1Q13562 356 aa21.71■■□□□ 1.07
RAB40B-203ENST00000570676 GJD4Q96KN9 370 aaPredicted RBP21.7■■□□□ 1.06
RAB40B-203ENST00000570676 NRKQ7Z2Y5 1582 aa21.69■■□□□ 1.06
RAB40B-203ENST00000570676 CCDC61Q9Y6R9 512 aa21.68■■□□□ 1.06
RAB40B-203ENST00000570676 ROCK2O75116 1388 aaKnown RBP21.68■■□□□ 1.06
RAB40B-203ENST00000570676 ATAD2Q6PL18 1390 aa21.68■■□□□ 1.06
RAB40B-203ENST00000570676 PPIP5K1Q6PFW1 1433 aa21.68■■□□□ 1.06
RAB40B-203ENST00000570676 ACEP12821 1306 aa21.67■■□□□ 1.06
RAB40B-203ENST00000570676 PLEKHG3A1L390 1219 aa21.66■■□□□ 1.06
RAB40B-203ENST00000570676 NBPF8Q3BBV2 869 aa21.65■■□□□ 1.06
RAB40B-203ENST00000570676 AKAP12Q02952 1782 aa21.64■■□□□ 1.06
RAB40B-203ENST00000570676 FAM83GA6ND36 823 aa21.64■■□□□ 1.05
RAB40B-203ENST00000570676 PAK3O75914 559 aaPredicted RBP21.64■■□□□ 1.05
RAB40B-203ENST00000570676 VPS72Q15906 364 aa21.64■■□□□ 1.05
RAB40B-203ENST00000570676 SRPK2P78362 688 aaKnown RBP21.63■■□□□ 1.05
RAB40B-203ENST00000570676 CABP2Q9NPB3 220 aa21.63■■□□□ 1.05
RAB40B-203ENST00000570676 PIK3C2AO00443 1686 aa21.6■■□□□ 1.05
RAB40B-203ENST00000570676 LMO7Q8WWI1 1683 aa21.6■■□□□ 1.05
RAB40B-203ENST00000570676 THSD7AQ9UPZ6 1657 aa21.6■■□□□ 1.05
RAB40B-203ENST00000570676 USP6P35125 1406 aa21.59■■□□□ 1.05
RAB40B-203ENST00000570676 TONSLQ96HA7 1378 aa21.59■■□□□ 1.05
RAB40B-203ENST00000570676 BTG4Q9NY30 223 aa21.58■■□□□ 1.05
RAB40B-203ENST00000570676 KIAA0232Q92628 1395 aa21.58■■□□□ 1.04
RAB40B-203ENST00000570676 USP19O94966 1318 aa21.57■■□□□ 1.04
RAB40B-203ENST00000570676 CLSPNQ9HAW4 1339 aa21.57■■□□□ 1.04
RAB40B-203ENST00000570676 BRD4O60885 1362 aaPredicted RBP21.57■■□□□ 1.04
RAB40B-203ENST00000570676 SBNO2Q9Y2G9 1366 aa21.57■■□□□ 1.04
RAB40B-203ENST00000570676 MON2Q7Z3U7 1717 aa21.57■■□□□ 1.04
RAB40B-203ENST00000570676 EVC2Q86UK5 1308 aa21.56■■□□□ 1.04
RAB40B-203ENST00000570676 SSH2Q76I76 1423 aa21.56■■□□□ 1.04
RAB40B-203ENST00000570676 NUTM2GQ5VZR2 741 aa21.56■■□□□ 1.04
RAB40B-203ENST00000570676 SLIT3O75094 1523 aa21.55■■□□□ 1.04
RAB40B-203ENST00000570676 PRDM11Q9NQV5 511 aa21.55■■□□□ 1.04
RAB40B-203ENST00000570676 ONECUT3O60422 494 aaPredicted RBP21.54■■□□□ 1.04
RAB40B-203ENST00000570676 SEPT12Q8IYM1 358 aa21.54■■□□□ 1.04
RAB40B-203ENST00000570676 CCDC9Q9Y3X0 531 aaKnown RBP21.54■■□□□ 1.04
RAB40B-203ENST00000570676 CABP1Q9NZU7 370 aa21.53■■□□□ 1.04
RAB40B-203ENST00000570676 CPDO75976 1380 aa21.51■■□□□ 1.03
RAB40B-203ENST00000570676 CAMTA1Q9Y6Y1 1673 aa21.51■■□□□ 1.03
RAB40B-203ENST00000570676 ABTB2Q8N961 1025 aa21.51■■□□□ 1.03
RAB40B-203ENST00000570676 SPATA31A5Q5VU36 1347 aa21.51■■□□□ 1.03
RAB40B-203ENST00000570676 SPATA31A7Q8IWB4 1347 aa21.51■■□□□ 1.03
RAB40B-203ENST00000570676 CHRNA2Q15822 529 aa21.5■■□□□ 1.03
RAB40B-203ENST00000570676 CARD11Q9BXL7 1154 aa21.5■■□□□ 1.03
RAB40B-203ENST00000570676 EP400Q96L91 3159 aa21.5■■□□□ 1.03
RAB40B-203ENST00000570676 USP54Q70EL1 1684 aa21.5■■□□□ 1.03
RAB40B-203ENST00000570676 CPSF1Q10570 1443 aaKnown RBP21.49■■□□□ 1.03
RAB40B-203ENST00000570676 ZC3H6P61129 1189 aaKnown RBP21.49■■□□□ 1.03
RAB40B-203ENST00000570676 BLMP54132 1417 aaPredicted RBP21.48■■□□□ 1.03
RAB40B-203ENST00000570676 COL18A1P39060 1754 aa21.48■■□□□ 1.03
RAB40B-203ENST00000570676 FAM98CQ17RN3 349 aaKnown RBP21.47■■□□□ 1.03
RAB40B-203ENST00000570676 NLRP13Q86W25 1043 aa21.46■■□□□ 1.03
RAB40B-203ENST00000570676 CD163L1Q9NR16 1453 aa21.45■■□□□ 1.03
RAB40B-203ENST00000570676 RGPD1P0DJD0 1748 aa21.45■■□□□ 1.02
RAB40B-203ENST00000570676 SPATA31A1Q5TZJ5 1347 aa21.45■■□□□ 1.02
RAB40B-203ENST00000570676 COL5A2P05997 1499 aaPredicted RBP21.45■■□□□ 1.02
RAB40B-203ENST00000570676 TNS1Q9HBL0 1735 aaKnown RBP21.44■■□□□ 1.02
RAB40B-203ENST00000570676 WNK3Q9BYP7 1800 aa21.44■■□□□ 1.02
RAB40B-203ENST00000570676 KRT27Q7Z3Y8 459 aa21.44■■□□□ 1.02
RAB40B-203ENST00000570676 CCDC125Q86Z20 511 aa21.44■■□□□ 1.02
RAB40B-203ENST00000570676 GCP02774 474 aa21.43■■□□□ 1.02
RAB40B-203ENST00000570676 NFAT5O94916 1531 aa21.42■■□□□ 1.02
RAB40B-203ENST00000570676 TTC21BQ7Z4L5 1316 aa21.42■■□□□ 1.02
RAB40B-203ENST00000570676 RGPD5Q99666 1765 aa21.42■■□□□ 1.02
RAB40B-203ENST00000570676 STRN4Q9NRL3 753 aa21.42■■□□□ 1.02
RAB40B-203ENST00000570676 PARP4Q9UKK3 1724 aaKnown RBP21.41■■□□□ 1.02
RAB40B-203ENST00000570676 A0A0G2JS52 829 aa21.41■■□□□ 1.02
RAB40B-203ENST00000570676 NLRP6P59044 892 aa21.41■■□□□ 1.02
RAB40B-203ENST00000570676 MYT1Q01538 1121 aa21.41■■□□□ 1.02
RAB40B-203ENST00000570676 KTN1Q86UP2 1357 aaKnown RBP21.4■■□□□ 1.02
RAB40B-203ENST00000570676 ZNF692Q9BU19 519 aaPredicted RBP21.4■■□□□ 1.02
RAB40B-203ENST00000570676 TTC21AQ8NDW8 1320 aa21.39■■□□□ 1.01
RAB40B-203ENST00000570676 AATKQ6ZMQ8 1374 aa21.37■■□□□ 1.01
RAB40B-203ENST00000570676 LRRC37A3O60309 1634 aa21.37■■□□□ 1.01
RAB40B-203ENST00000570676 ABCC6O95255 1503 aa21.36■■□□□ 1.01
RAB40B-203ENST00000570676 LARP1Q6PKG0 1096 aaKnown RBP21.36■■□□□ 1.01
RAB40B-203ENST00000570676 TESK2Q96S53 571 aa21.36■■□□□ 1.01
RAB40B-203ENST00000570676 LTN1O94822 1766 aa21.36■■□□□ 1.01
RAB40B-203ENST00000570676 CRB1P82279 1406 aa21.35■■□□□ 1.01
RAB40B-203ENST00000570676 BARGINQ6ZT62 677 aa21.34■■□□□ 1.01
RAB40B-203ENST00000570676 DEFB132Q7Z7B7 95 aa21.34■■□□□ 1.01
RAB40B-203ENST00000570676 EVA1CP58658 441 aa21.33■■□□□ 1.01
RAB40B-203ENST00000570676 FAM182BQ5T319 152 aa21.33■■□□□ 1.01
RAB40B-203ENST00000570676 USP35Q9P2H5 1018 aa21.33■■□□□ 1.01
RAB40B-203ENST00000570676 A0A1W2PP64 1363 aa21.33■■□□□ 1
RAB40B-203ENST00000570676 USP31Q70CQ4 1352 aa21.33■■□□□ 1
RAB40B-203ENST00000570676 EDC4Q6P2E9 1401 aaKnown RBP21.32■■□□□ 1
RAB40B-203ENST00000570676 ZEB1P37275 1124 aaPredicted RBP21.32■■□□□ 1
RAB40B-203ENST00000570676 PEAK1Q9H792 1746 aa21.32■■□□□ 1
RAB40B-203ENST00000570676 ST20-MTHFSA0A0A6YYL1 179 aa21.31■■□□□ 1
RAB40B-203ENST00000570676 ZBTB7CA1YPR0 619 aa21.31■■□□□ 1
RAB40B-203ENST00000570676 PUS7Q96PZ0 661 aaKnown RBP21.31■■□□□ 1
RAB40B-203ENST00000570676 DISP2A7MBM2 1401 aa21.3■■□□□ 1
RAB40B-203ENST00000570676 SF3B2Q13435 895 aaKnown RBP21.3■■□□□ 1
RAB40B-203ENST00000570676 ARHGEF25Q86VW2 580 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms