RNA–Protein interactions for RNA: ENST00000570514.5

TRAP1-204, Transcript of TNF receptor associated protein 1, humanhuman

TSL 2

Gene TRAP1, Length 412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-204ENST00000570514 PSME1Q06323 249 aa13.16□□□□□ -0.3
TRAP1-204ENST00000570514 COG3Q96JB2 828 aa13.16□□□□□ -0.3
TRAP1-204ENST00000570514 MRS2Q9HD23 443 aa13.16□□□□□ -0.3
TRAP1-204ENST00000570514 AATKQ6ZMQ8 1374 aa13.16□□□□□ -0.3
TRAP1-204ENST00000570514 USP31Q70CQ4 1352 aa13.16□□□□□ -0.3
TRAP1-204ENST00000570514 CFAP53Q96M91 514 aa13.15□□□□□ -0.3
TRAP1-204ENST00000570514 LTBP4Q8N2S1 1624 aa13.14□□□□□ -0.31
TRAP1-204ENST00000570514 XIRP1Q702N8 1843 aaKnown RBP13.14□□□□□ -0.31
TRAP1-204ENST00000570514 PPP2R1AP30153 589 aa13.14□□□□□ -0.31
TRAP1-204ENST00000570514 USP54Q70EL1 1684 aa13.13□□□□□ -0.31
TRAP1-204ENST00000570514 SBNO1A3KN83 1393 aa13.13□□□□□ -0.31
TRAP1-204ENST00000570514 KIF24Q5T7B8 1368 aa13.13□□□□□ -0.31
TRAP1-204ENST00000570514 NUTM2FA1L443 756 aa13.13□□□□□ -0.31
TRAP1-204ENST00000570514 SLAIN2Q9P270 581 aa13.13□□□□□ -0.31
TRAP1-204ENST00000570514 RGPD8O14715 1765 aaPredicted RBP13.12□□□□□ -0.31
TRAP1-204ENST00000570514 PMFBP1Q8TBY8 1022 aa13.12□□□□□ -0.31
TRAP1-204ENST00000570514 OVOS2A0A0J9YW53 1432 aa13.12□□□□□ -0.31
TRAP1-204ENST00000570514 OVOS2Q6IE36 1432 aa13.12□□□□□ -0.31
TRAP1-204ENST00000570514 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRAP1-204ENST00000570514 RBM33Q96EV2 1170 aaKnown RBP13.11□□□□□ -0.31
TRAP1-204ENST00000570514 KCNH5Q8NCM2 988 aa13.1□□□□□ -0.31
TRAP1-204ENST00000570514 GGNBP2Q9H3C7 697 aa13.1□□□□□ -0.31
TRAP1-204ENST00000570514 SMG6Q86US8 1419 aaKnown RBP13.1□□□□□ -0.31
TRAP1-204ENST00000570514 ARHGEF10O15013 1369 aa13.09□□□□□ -0.31
TRAP1-204ENST00000570514 FOXO3O43524 673 aa13.08□□□□□ -0.32
TRAP1-204ENST00000570514 NME9Q86XW9 330 aa13.08□□□□□ -0.32
TRAP1-204ENST00000570514 ABTB2Q8N961 1025 aa13.08□□□□□ -0.32
TRAP1-204ENST00000570514 PNISRQ8TF01 805 aaKnown RBP13.08□□□□□ -0.32
TRAP1-204ENST00000570514 ORAI2Q96SN7 254 aa13.08□□□□□ -0.32
TRAP1-204ENST00000570514 NUDCQ9Y266 331 aa13.08□□□□□ -0.32
TRAP1-204ENST00000570514 PNPLA6Q8IY17 1366 aa13.07□□□□□ -0.32
TRAP1-204ENST00000570514 TOM1O60784 492 aa13.07□□□□□ -0.32
TRAP1-204ENST00000570514 WDR43Q15061 677 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAP1-204ENST00000570514 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
TRAP1-204ENST00000570514 KRT28Q7Z3Y7 464 aa13.07□□□□□ -0.32
TRAP1-204ENST00000570514 NGEFQ8N5V2 710 aa13.07□□□□□ -0.32
TRAP1-204ENST00000570514 PNNQ9H307 717 aaKnown RBP13.07□□□□□ -0.32
TRAP1-204ENST00000570514 CDK12Q9NYV4 1490 aaPredicted RBP13.07□□□□□ -0.32
TRAP1-204ENST00000570514 PIK3C2AO00443 1686 aa13.06□□□□□ -0.32
TRAP1-204ENST00000570514 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
TRAP1-204ENST00000570514 MTHFSP49914 203 aa13.06□□□□□ -0.32
TRAP1-204ENST00000570514 NLRP6P59044 892 aa13.06□□□□□ -0.32
TRAP1-204ENST00000570514 RTL1A6NKG5 1358 aa13.06□□□□□ -0.32
TRAP1-204ENST00000570514 TRPM3Q9HCF6 1732 aaPredicted RBP13.05□□□□□ -0.32
TRAP1-204ENST00000570514 PXDNQ92626 1479 aa13.05□□□□□ -0.32
TRAP1-204ENST00000570514 CNGB1Q14028 1251 aaPredicted RBP13.05□□□□□ -0.32
TRAP1-204ENST00000570514 SOS2Q07890 1332 aaPredicted RBP13.05□□□□□ -0.32
TRAP1-204ENST00000570514 TNS3Q68CZ2 1445 aa13.05□□□□□ -0.32
TRAP1-204ENST00000570514 CENPBP07199 599 aaPredicted RBP13.03□□□□□ -0.32
TRAP1-204ENST00000570514 POLKQ9UBT6 870 aa13.03□□□□□ -0.32
TRAP1-204ENST00000570514 USP19O94966 1318 aa13.03□□□□□ -0.32
TRAP1-204ENST00000570514 SLIT3O75094 1523 aa13.03□□□□□ -0.32
TRAP1-204ENST00000570514 ABCC6O95255 1503 aa13.03□□□□□ -0.32
TRAP1-204ENST00000570514 MED1Q15648 1581 aaPredicted RBP13.03□□□□□ -0.32
TRAP1-204ENST00000570514 NHSL1Q5SYE7 1610 aa13.02□□□□□ -0.32
TRAP1-204ENST00000570514 ALS2Q96Q42 1657 aa13.02□□□□□ -0.32
TRAP1-204ENST00000570514 NCBP3Q53F19 620 aaKnown RBP13.02□□□□□ -0.33
TRAP1-204ENST00000570514 SPATA31A3Q5VYP0 1347 aa13.02□□□□□ -0.33
TRAP1-204ENST00000570514 FLT4P35916 1363 aa13.02□□□□□ -0.33
TRAP1-204ENST00000570514 AHDC1Q5TGY3 1603 aaPredicted RBP13.02□□□□□ -0.33
TRAP1-204ENST00000570514 PHRF1Q9P1Y6 1649 aaKnown RBP13.02□□□□□ -0.33
TRAP1-204ENST00000570514 DIAPH1O60610 1272 aaKnown RBP13.01□□□□□ -0.33
TRAP1-204ENST00000570514 TNNT2P45379 298 aaPredicted RBP13.01□□□□□ -0.33
TRAP1-204ENST00000570514 FAM9BQ8IZU0 186 aa13□□□□□ -0.33
TRAP1-204ENST00000570514 BLMP54132 1417 aaPredicted RBP12.99□□□□□ -0.33
TRAP1-204ENST00000570514 CCDC184Q52MB2 194 aa12.99□□□□□ -0.33
TRAP1-204ENST00000570514 LRRC59Q96AG4 307 aaKnown RBP12.99□□□□□ -0.33
TRAP1-204ENST00000570514 COL3A1P02461 1466 aaPredicted RBP12.98□□□□□ -0.33
TRAP1-204ENST00000570514 MAP2P11137 1827 aaKnown RBP12.98□□□□□ -0.33
TRAP1-204ENST00000570514 NEFMP07197 916 aa12.98□□□□□ -0.33
TRAP1-204ENST00000570514 NFAT5O94916 1531 aa12.98□□□□□ -0.33
TRAP1-204ENST00000570514 CPDO75976 1380 aa12.97□□□□□ -0.33
TRAP1-204ENST00000570514 ZBED9Q6R2W3 1325 aa12.97□□□□□ -0.33
TRAP1-204ENST00000570514 ROBO1Q9Y6N7 1651 aa12.97□□□□□ -0.33
TRAP1-204ENST00000570514 GCP02774 474 aa12.97□□□□□ -0.33
TRAP1-204ENST00000570514 AMPHP49418 695 aa12.97□□□□□ -0.33
TRAP1-204ENST00000570514 MARF1Q9Y4F3 1742 aaKnown RBP12.96□□□□□ -0.33
TRAP1-204ENST00000570514 PLEKHG2Q9H7P9 1386 aa12.96□□□□□ -0.33
TRAP1-204ENST00000570514 MAP3K19Q56UN5 1328 aa12.96□□□□□ -0.33
TRAP1-204ENST00000570514 FCHSD2O94868 740 aa12.96□□□□□ -0.33
TRAP1-204ENST00000570514 CERKQ8TCT0 537 aa12.96□□□□□ -0.33
TRAP1-204ENST00000570514 PPM1GO15355 546 aaPredicted RBP12.95□□□□□ -0.34
TRAP1-204ENST00000570514 HNRNPUQ00839 825 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRAP1-204ENST00000570514 LMOD2Q6P5Q4 547 aa12.95□□□□□ -0.34
TRAP1-204ENST00000570514 IP6K1Q92551 441 aa12.95□□□□□ -0.34
TRAP1-204ENST00000570514 ZRANB1Q9UGI0 708 aa12.95□□□□□ -0.34
TRAP1-204ENST00000570514 ADAMTS8Q9UP79 889 aa12.95□□□□□ -0.34
TRAP1-204ENST00000570514 SHPRHQ149N8 1683 aa12.95□□□□□ -0.34
TRAP1-204ENST00000570514 U2AF1L5P0DN76 240 aaPredicted RBP12.94□□□□□ -0.34
TRAP1-204ENST00000570514 U2AF1Q01081 240 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRAP1-204ENST00000570514 PDE3BQ13370 1112 aa12.94□□□□□ -0.34
TRAP1-204ENST00000570514 ARHGEF25Q86VW2 580 aa12.94□□□□□ -0.34
TRAP1-204ENST00000570514 RUNDC1Q96C34 613 aa12.94□□□□□ -0.34
TRAP1-204ENST00000570514 EMILIN1Q9Y6C2 1016 aa12.94□□□□□ -0.34
TRAP1-204ENST00000570514 UBAP1LF5GYI3 381 aa12.93□□□□□ -0.34
TRAP1-204ENST00000570514 IL13P35225 146 aa12.93□□□□□ -0.34
TRAP1-204ENST00000570514 XPCQ01831 940 aaPredicted RBP12.93□□□□□ -0.34
TRAP1-204ENST00000570514 RRS1Q15050 365 aaKnown RBP12.93□□□□□ -0.34
TRAP1-204ENST00000570514 COL22A1Q8NFW1 1626 aaPredicted RBP12.92□□□□□ -0.34
TRAP1-204ENST00000570514 HOXC9P31274 260 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms