RNA–Protein interactions for RNA: ENST00000569983.5

PKD1-237, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-237ENST00000569983 UNC5CLQ8IV45 518 aa28.82■■■□□ 2.2
PKD1-237ENST00000569983 CABP2Q9NPB3 220 aa28.82■■■□□ 2.2
PKD1-237ENST00000569983 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.81■■■□□ 2.2
PKD1-237ENST00000569983 PPIP5K1Q6PFW1 1433 aa28.79■■■□□ 2.2
PKD1-237ENST00000569983 GJD4Q96KN9 370 aaPredicted RBP28.78■■■□□ 2.2
PKD1-237ENST00000569983 EVC2Q86UK5 1308 aa28.77■■■□□ 2.2
PKD1-237ENST00000569983 UPF1Q92900 1129 aaKnown RBP eCLIP28.76■■■□□ 2.19
PKD1-237ENST00000569983 PLCH1Q4KWH8 1693 aa28.76■■■□□ 2.19
PKD1-237ENST00000569983 CARD11Q9BXL7 1154 aa28.75■■■□□ 2.19
PKD1-237ENST00000569983 NWD2Q9ULI1 1742 aa28.74■■■□□ 2.19
PKD1-237ENST00000569983 FAM83GA6ND36 823 aa28.74■■■□□ 2.19
PKD1-237ENST00000569983 RALGAPBQ86X10 1494 aa28.73■■■□□ 2.19
PKD1-237ENST00000569983 CRYBG1Q9Y4K1 1723 aa28.72■■■□□ 2.19
PKD1-237ENST00000569983 CABP1Q9NZU7 370 aa28.71■■■□□ 2.19
PKD1-237ENST00000569983 NUTM2GQ5VZR2 741 aa28.7■■■□□ 2.18
PKD1-237ENST00000569983 VPS72Q15906 364 aa28.69■■■□□ 2.18
PKD1-237ENST00000569983 COL14A1Q05707 1796 aaKnown RBP28.68■■■□□ 2.18
PKD1-237ENST00000569983 GLI3P10071 1580 aa28.68■■■□□ 2.18
PKD1-237ENST00000569983 ABTB2Q8N961 1025 aa28.68■■■□□ 2.18
PKD1-237ENST00000569983 CCDC9Q9Y3X0 531 aaKnown RBP28.68■■■□□ 2.18
PKD1-237ENST00000569983 PRDM11Q9NQV5 511 aa28.67■■■□□ 2.18
PKD1-237ENST00000569983 BTG4Q9NY30 223 aa28.67■■■□□ 2.18
PKD1-237ENST00000569983 ATAD2Q6PL18 1390 aa28.66■■■□□ 2.18
PKD1-237ENST00000569983 PHRF1Q9P1Y6 1649 aaKnown RBP28.65■■■□□ 2.18
PKD1-237ENST00000569983 BRD4O60885 1362 aaPredicted RBP28.65■■■□□ 2.18
PKD1-237ENST00000569983 SBNO2Q9Y2G9 1366 aa28.65■■■□□ 2.18
PKD1-237ENST00000569983 NRAPQ86VF7 1730 aa28.63■■■□□ 2.17
PKD1-237ENST00000569983 USP6P35125 1406 aa28.63■■■□□ 2.17
PKD1-237ENST00000569983 KIAA0232Q92628 1395 aa28.62■■■□□ 2.17
PKD1-237ENST00000569983 ZC3H6P61129 1189 aaKnown RBP28.6■■■□□ 2.17
PKD1-237ENST00000569983 NLRP13Q86W25 1043 aa28.6■■■□□ 2.17
PKD1-237ENST00000569983 USP19O94966 1318 aa28.59■■■□□ 2.17
PKD1-237ENST00000569983 CHRNA2Q15822 529 aa28.58■■■□□ 2.17
PKD1-237ENST00000569983 PCGF6Q9BYE7 350 aa28.58■■■□□ 2.17
PKD1-237ENST00000569983 ZNF692Q9BU19 519 aaPredicted RBP28.57■■■□□ 2.16
PKD1-237ENST00000569983 NRKQ7Z2Y5 1582 aa28.57■■■□□ 2.16
PKD1-237ENST00000569983 SEPT12Q8IYM1 358 aa28.56■■■□□ 2.16
PKD1-237ENST00000569983 SSH2Q76I76 1423 aa28.55■■■□□ 2.16
PKD1-237ENST00000569983 ONECUT3O60422 494 aaPredicted RBP28.54■■■□□ 2.16
PKD1-237ENST00000569983 NLRP6P59044 892 aa28.54■■■□□ 2.16
PKD1-237ENST00000569983 GCP02774 474 aa28.53■■■□□ 2.16
PKD1-237ENST00000569983 AKAP12Q02952 1782 aa28.52■■■□□ 2.16
PKD1-237ENST00000569983 CPDO75976 1380 aa28.52■■■□□ 2.16
PKD1-237ENST00000569983 SPATA31A5Q5VU36 1347 aa28.51■■■□□ 2.15
PKD1-237ENST00000569983 SPATA31A7Q8IWB4 1347 aa28.51■■■□□ 2.15
PKD1-237ENST00000569983 CLSPNQ9HAW4 1339 aa28.51■■■□□ 2.15
PKD1-237ENST00000569983 A0A0G2JS52 829 aa28.51■■■□□ 2.15
PKD1-237ENST00000569983 MYT1Q01538 1121 aa28.51■■■□□ 2.15
PKD1-237ENST00000569983 FAM98CQ17RN3 349 aaKnown RBP28.51■■■□□ 2.15
PKD1-237ENST00000569983 CPSF1Q10570 1443 aaKnown RBP28.51■■■□□ 2.15
PKD1-237ENST00000569983 BRWD3Q6RI45 1802 aa28.5■■■□□ 2.15
PKD1-237ENST00000569983 STRN4Q9NRL3 753 aa28.5■■■□□ 2.15
PKD1-237ENST00000569983 EP400Q96L91 3159 aa28.5■■■□□ 2.15
PKD1-237ENST00000569983 TTC21BQ7Z4L5 1316 aa28.49■■■□□ 2.15
PKD1-237ENST00000569983 PIK3C2AO00443 1686 aa28.49■■■□□ 2.15
PKD1-237ENST00000569983 KTN1Q86UP2 1357 aaKnown RBP28.49■■■□□ 2.15
PKD1-237ENST00000569983 ST20-MTHFSA0A0A6YYL1 179 aa28.48■■■□□ 2.15
PKD1-237ENST00000569983 EVA1CP58658 441 aa28.47■■■□□ 2.15
PKD1-237ENST00000569983 TMC1Q8TDI8 760 aa28.47■■■□□ 2.15
PKD1-237ENST00000569983 TTC21AQ8NDW8 1320 aa28.46■■■□□ 2.15
PKD1-237ENST00000569983 TIMELESSQ9UNS1 1208 aa28.46■■■□□ 2.15
PKD1-237ENST00000569983 SLIT3O75094 1523 aa28.46■■■□□ 2.15
PKD1-237ENST00000569983 KRT27Q7Z3Y8 459 aa28.45■■■□□ 2.14
PKD1-237ENST00000569983 TESK2Q96S53 571 aa28.45■■■□□ 2.14
PKD1-237ENST00000569983 SPATA31A1Q5TZJ5 1347 aa28.44■■■□□ 2.14
PKD1-237ENST00000569983 CCDC125Q86Z20 511 aa28.44■■■□□ 2.14
PKD1-237ENST00000569983 PUS7Q96PZ0 661 aaKnown RBP28.44■■■□□ 2.14
PKD1-237ENST00000569983 LMO7Q8WWI1 1683 aa28.44■■■□□ 2.14
PKD1-237ENST00000569983 CAMTA1Q9Y6Y1 1673 aa28.44■■■□□ 2.14
PKD1-237ENST00000569983 MON2Q7Z3U7 1717 aa28.43■■■□□ 2.14
PKD1-237ENST00000569983 ZBTB7CA1YPR0 619 aa28.43■■■□□ 2.14
PKD1-237ENST00000569983 SLC24A1O60721 1099 aa28.43■■■□□ 2.14
PKD1-237ENST00000569983 SLC12A5Q9H2X9 1139 aa28.42■■■□□ 2.14
PKD1-237ENST00000569983 CD163L1Q9NR16 1453 aa28.41■■■□□ 2.14
PKD1-237ENST00000569983 USP47Q96K76 1375 aa28.41■■■□□ 2.14
PKD1-237ENST00000569983 HDGFL2Q7Z4V5 671 aaPredicted RBP28.41■■■□□ 2.14
PKD1-237ENST00000569983 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.39■■■□□ 2.14
PKD1-237ENST00000569983 KCNH5Q8NCM2 988 aa28.39■■■□□ 2.14
PKD1-237ENST00000569983 BLMP54132 1417 aaPredicted RBP28.38■■■□□ 2.13
PKD1-237ENST00000569983 LARP1Q6PKG0 1096 aaKnown RBP28.38■■■□□ 2.13
PKD1-237ENST00000569983 TERF2IPQ9NYB0 399 aa28.38■■■□□ 2.13
PKD1-237ENST00000569983 USP35Q9P2H5 1018 aa28.38■■■□□ 2.13
PKD1-237ENST00000569983 THSD7AQ9UPZ6 1657 aa28.38■■■□□ 2.13
PKD1-237ENST00000569983 AATKQ6ZMQ8 1374 aa28.37■■■□□ 2.13
PKD1-237ENST00000569983 COL5A2P05997 1499 aaPredicted RBP28.36■■■□□ 2.13
PKD1-237ENST00000569983 SOX12O15370 315 aa28.36■■■□□ 2.13
PKD1-237ENST00000569983 CCER1Q8TC90 406 aaPredicted RBP28.35■■■□□ 2.13
PKD1-237ENST00000569983 NINLQ9Y2I6 1382 aa28.35■■■□□ 2.13
PKD1-237ENST00000569983 A0A1W2PP64 1363 aa28.34■■■□□ 2.13
PKD1-237ENST00000569983 EDC4Q6P2E9 1401 aaKnown RBP28.34■■■□□ 2.13
PKD1-237ENST00000569983 TMF1P82094 1093 aa28.32■■■□□ 2.12
PKD1-237ENST00000569983 SF3B2Q13435 895 aaKnown RBP28.32■■■□□ 2.12
PKD1-237ENST00000569983 BARGINQ6ZT62 677 aa28.32■■■□□ 2.12
PKD1-237ENST00000569983 NME9Q86XW9 330 aa28.32■■■□□ 2.12
PKD1-237ENST00000569983 TCP11L2Q8N4U5 519 aa28.32■■■□□ 2.12
PKD1-237ENST00000569983 USP31Q70CQ4 1352 aa28.32■■■□□ 2.12
PKD1-237ENST00000569983 ARHGEF25Q86VW2 580 aa28.31■■■□□ 2.12
PKD1-237ENST00000569983 ZRANB1Q9UGI0 708 aa28.31■■■□□ 2.12
PKD1-237ENST00000569983 NFAT5O94916 1531 aa28.3■■■□□ 2.12
PKD1-237ENST00000569983 COL18A1P39060 1754 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms