RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 ARHGAP23Q9P227 1491 aa7.92□□□□□ -1.14
CYLD-216ENST00000569891 MAPK8IP3Q9UPT6 1336 aa7.92□□□□□ -1.14
CYLD-216ENST00000569891 CPS1P31327 1500 aa7.92□□□□□ -1.14
CYLD-216ENST00000569891 FKBP8Q14318 412 aa7.91□□□□□ -1.14
CYLD-216ENST00000569891 SETD1BQ9UPS6 1966 aaKnown RBP7.91□□□□□ -1.14
CYLD-216ENST00000569891 CALD1Q05682 793 aaKnown RBP7.91□□□□□ -1.14
CYLD-216ENST00000569891 COG3Q96JB2 828 aa7.91□□□□□ -1.14
CYLD-216ENST00000569891 PTCH1Q13635 1447 aa7.91□□□□□ -1.14
CYLD-216ENST00000569891 EDC4Q6P2E9 1401 aaKnown RBP7.91□□□□□ -1.14
CYLD-216ENST00000569891 TULP4Q9NRJ4 1543 aa7.91□□□□□ -1.14
CYLD-216ENST00000569891 CEBPAP49715 358 aaPredicted RBP7.9□□□□□ -1.14
CYLD-216ENST00000569891 NUDT16Q96DE0 195 aaKnown RBP7.9□□□□□ -1.14
CYLD-216ENST00000569891 BLMP54132 1417 aaPredicted RBP7.9□□□□□ -1.14
CYLD-216ENST00000569891 RGPD2P0DJD1 1756 aa7.9□□□□□ -1.14
CYLD-216ENST00000569891 NWD1Q149M9 1564 aa7.9□□□□□ -1.15
CYLD-216ENST00000569891 GOLGA2Q08379 1002 aa7.9□□□□□ -1.15
CYLD-216ENST00000569891 RUNDC1Q96C34 613 aa7.89□□□□□ -1.15
CYLD-216ENST00000569891 AMOTL2Q9Y2J4 779 aa7.89□□□□□ -1.15
CYLD-216ENST00000569891 CABP1Q9NZU7 370 aa7.89□□□□□ -1.15
CYLD-216ENST00000569891 ZFHX3Q15911 3703 aa7.89□□□□□ -1.15
CYLD-216ENST00000569891 TTC21AQ8NDW8 1320 aa7.89□□□□□ -1.15
CYLD-216ENST00000569891 A0A1W2PP64 1363 aa7.89□□□□□ -1.15
CYLD-216ENST00000569891 ADRA2BP18089 450 aa7.89□□□□□ -1.15
CYLD-216ENST00000569891 CCDC184Q52MB2 194 aa7.89□□□□□ -1.15
CYLD-216ENST00000569891 PPIP5K1Q6PFW1 1433 aa7.89□□□□□ -1.15
CYLD-216ENST00000569891 LMTK3Q96Q04 1460 aa7.89□□□□□ -1.15
CYLD-216ENST00000569891 RGPD5Q99666 1765 aa7.89□□□□□ -1.15
CYLD-216ENST00000569891 COL18A1P39060 1754 aa7.88□□□□□ -1.15
CYLD-216ENST00000569891 LMOD3Q0VAK6 560 aa7.88□□□□□ -1.15
CYLD-216ENST00000569891 C14orf37Q86TY3 774 aa7.88□□□□□ -1.15
CYLD-216ENST00000569891 ANKARQ7Z5J8 1434 aa7.88□□□□□ -1.15
CYLD-216ENST00000569891 E9PSI1 815 aa7.88□□□□□ -1.15
CYLD-216ENST00000569891 PPP4R2Q9NY27 417 aa7.88□□□□□ -1.15
CYLD-216ENST00000569891 SUPT16HQ9Y5B9 1047 aaKnown RBP7.88□□□□□ -1.15
CYLD-216ENST00000569891 LTBP4Q8N2S1 1624 aa7.88□□□□□ -1.15
CYLD-216ENST00000569891 METP08581 1390 aa7.88□□□□□ -1.15
CYLD-216ENST00000569891 HAP1P54257 671 aaPredicted RBP7.88□□□□□ -1.15
CYLD-216ENST00000569891 NGDNQ8NEJ9 315 aaKnown RBP7.88□□□□□ -1.15
CYLD-216ENST00000569891 CARD14Q9BXL6 1004 aa7.88□□□□□ -1.15
CYLD-216ENST00000569891 ADAMTS13Q76LX8 1427 aa7.87□□□□□ -1.15
CYLD-216ENST00000569891 DIAPH1O60610 1272 aaKnown RBP7.87□□□□□ -1.15
CYLD-216ENST00000569891 MS4A1P11836 297 aa7.87□□□□□ -1.15
CYLD-216ENST00000569891 WAPLQ7Z5K2 1190 aa7.87□□□□□ -1.15
CYLD-216ENST00000569891 MYH16Q9H6N6 1097 aa7.87□□□□□ -1.15
CYLD-216ENST00000569891 MTHFSP49914 203 aa7.87□□□□□ -1.15
CYLD-216ENST00000569891 ADAMTS8Q9UP79 889 aa7.87□□□□□ -1.15
CYLD-216ENST00000569891 RGPD1P0DJD0 1748 aa7.87□□□□□ -1.15
CYLD-216ENST00000569891 ADGRB2O60241 1585 aa7.87□□□□□ -1.15
CYLD-216ENST00000569891 SLC26A8Q96RN1 970 aa7.87□□□□□ -1.15
CYLD-216ENST00000569891 PLEKHG3A1L390 1219 aa7.86□□□□□ -1.15
CYLD-216ENST00000569891 U2AF1L5P0DN76 240 aaPredicted RBP7.86□□□□□ -1.15
CYLD-216ENST00000569891 LTKP29376 864 aa7.86□□□□□ -1.15
CYLD-216ENST00000569891 U2AF1Q01081 240 aaKnown RBP eCLIP7.86□□□□□ -1.15
CYLD-216ENST00000569891 RCAN3Q9UKA8 241 aa7.86□□□□□ -1.15
CYLD-216ENST00000569891 SPEGQ15772 3267 aa7.86□□□□□ -1.15
CYLD-216ENST00000569891 MON2Q7Z3U7 1717 aa7.86□□□□□ -1.15
CYLD-216ENST00000569891 TNNT2P45379 298 aaPredicted RBP7.85□□□□□ -1.15
CYLD-216ENST00000569891 U2SURPO15042 1029 aaKnown RBP7.85□□□□□ -1.15
CYLD-216ENST00000569891 CT47B1P0C2W7 299 aaPredicted RBP7.85□□□□□ -1.15
CYLD-216ENST00000569891 NPHP4O75161 1426 aaPredicted RBP7.85□□□□□ -1.15
CYLD-216ENST00000569891 AATKQ6ZMQ8 1374 aa7.85□□□□□ -1.15
CYLD-216ENST00000569891 WDR63Q8IWG1 891 aa7.85□□□□□ -1.15
CYLD-216ENST00000569891 GGNBP2Q9H3C7 697 aa7.85□□□□□ -1.15
CYLD-216ENST00000569891 CAMTA1Q9Y6Y1 1673 aa7.85□□□□□ -1.15
CYLD-216ENST00000569891 CDC42BPGQ6DT37 1551 aa7.84□□□□□ -1.15
CYLD-216ENST00000569891 ALS2Q96Q42 1657 aa7.84□□□□□ -1.15
CYLD-216ENST00000569891 ITSN1Q15811 1721 aa7.84□□□□□ -1.15
CYLD-216ENST00000569891 FYB1O15117 783 aa7.84□□□□□ -1.15
CYLD-216ENST00000569891 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.84□□□□□ -1.15
CYLD-216ENST00000569891 LMO7Q8WWI1 1683 aa7.84□□□□□ -1.15
CYLD-216ENST00000569891 CCDC27Q2M243 656 aa7.84□□□□□ -1.15
CYLD-216ENST00000569891 FCHSD2O94868 740 aa7.84□□□□□ -1.16
CYLD-216ENST00000569891 CANXP27824 592 aaKnown RBP7.84□□□□□ -1.16
CYLD-216ENST00000569891 AAMPQ13685 434 aa7.84□□□□□ -1.16
CYLD-216ENST00000569891 PEAK1Q9H792 1746 aa7.83□□□□□ -1.16
CYLD-216ENST00000569891 KCNA6P17658 529 aa7.83□□□□□ -1.16
CYLD-216ENST00000569891 CHMP4BQ9H444 224 aaKnown RBP7.83□□□□□ -1.16
CYLD-216ENST00000569891 ROBO2Q9HCK4 1378 aa7.83□□□□□ -1.16
CYLD-216ENST00000569891 CHMP4AQ9BY43 222 aa7.83□□□□□ -1.16
CYLD-216ENST00000569891 SALL2Q9Y467 1007 aaPredicted RBP7.83□□□□□ -1.16
CYLD-216ENST00000569891 TTC21BQ7Z4L5 1316 aa7.83□□□□□ -1.16
CYLD-216ENST00000569891 CPSF1Q10570 1443 aaKnown RBP7.83□□□□□ -1.16
CYLD-216ENST00000569891 PLEKHH1Q9ULM0 1364 aa7.82□□□□□ -1.16
CYLD-216ENST00000569891 KIF1AQ12756 1690 aa7.82□□□□□ -1.16
CYLD-216ENST00000569891 KIF24Q5T7B8 1368 aa7.82□□□□□ -1.16
CYLD-216ENST00000569891 APAF1O14727 1248 aa7.82□□□□□ -1.16
CYLD-216ENST00000569891 KIF20BQ96Q89 1820 aa7.82□□□□□ -1.16
CYLD-216ENST00000569891 PHRF1Q9P1Y6 1649 aaKnown RBP7.81□□□□□ -1.16
CYLD-216ENST00000569891 PPM1GO15355 546 aaPredicted RBP7.81□□□□□ -1.16
CYLD-216ENST00000569891 NCOA3Q9Y6Q9 1424 aa7.81□□□□□ -1.16
CYLD-216ENST00000569891 CCDC136Q96JN2 1154 aa7.81□□□□□ -1.16
CYLD-216ENST00000569891 SIPA1L3O60292 1781 aaPredicted RBP7.81□□□□□ -1.16
CYLD-216ENST00000569891 ACEP12821 1306 aa7.81□□□□□ -1.16
CYLD-216ENST00000569891 IL16Q14005 1332 aa7.81□□□□□ -1.16
CYLD-216ENST00000569891 PSME1Q06323 249 aa7.81□□□□□ -1.16
CYLD-216ENST00000569891 PROSER2Q86WR7 435 aaPredicted RBP7.81□□□□□ -1.16
CYLD-216ENST00000569891 ZNF428Q96B54 188 aa7.81□□□□□ -1.16
CYLD-216ENST00000569891 ATF3P18847 181 aa7.8□□□□□ -1.16
CYLD-216ENST00000569891 RRP1P56182 461 aaKnown RBP7.8□□□□□ -1.16
CYLD-216ENST00000569891 KCNH5Q8NCM2 988 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms