RNA–Protein interactions for RNA: ENST00000569711.1

LINC01654-201, Transcript of long intergenic non-protein coding RNA 1654, humanhuman

TSL 1 (best) BASIC

Gene LINC01654, Length 2,471 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01654-201ENST00000569711 PDZRN3Q9UPQ7 1066 aa13.62□□□□□ -0.23
LINC01654-201ENST00000569711 DLC1Q96QB1 1528 aa13.62□□□□□ -0.23
LINC01654-201ENST00000569711 KIF16BQ96L93 1317 aa13.62□□□□□ -0.23
LINC01654-201ENST00000569711 IPO8O15397 1037 aaKnown RBP13.62□□□□□ -0.23
LINC01654-201ENST00000569711 TBC1D32Q96NH3 1257 aa13.62□□□□□ -0.23
LINC01654-201ENST00000569711 CHMP4BQ9H444 224 aaKnown RBP13.61□□□□□ -0.23
LINC01654-201ENST00000569711 CD163L1Q9NR16 1453 aa13.61□□□□□ -0.23
LINC01654-201ENST00000569711 RAPGEF3O95398 923 aa13.61□□□□□ -0.23
LINC01654-201ENST00000569711 ALDH1L2Q3SY69 923 aa13.61□□□□□ -0.23
LINC01654-201ENST00000569711 FYB1O15117 783 aa13.6□□□□□ -0.23
LINC01654-201ENST00000569711 SMC4Q9NTJ3 1288 aa13.6□□□□□ -0.23
LINC01654-201ENST00000569711 KIF20BQ96Q89 1820 aa13.6□□□□□ -0.23
LINC01654-201ENST00000569711 REREQ9P2R6 1566 aa13.6□□□□□ -0.23
LINC01654-201ENST00000569711 ATP7BP35670 1465 aa13.6□□□□□ -0.23
LINC01654-201ENST00000569711 DIAPH1O60610 1272 aaKnown RBP13.59□□□□□ -0.23
LINC01654-201ENST00000569711 FCHSD2O94868 740 aa13.59□□□□□ -0.23
LINC01654-201ENST00000569711 BRPF1P55201 1214 aaPredicted RBP13.59□□□□□ -0.23
LINC01654-201ENST00000569711 ATF7IPQ6VMQ6 1270 aa13.59□□□□□ -0.23
LINC01654-201ENST00000569711 TRIM35Q9UPQ4 493 aa13.59□□□□□ -0.23
LINC01654-201ENST00000569711 ARHGEF40Q8TER5 1519 aa13.59□□□□□ -0.23
LINC01654-201ENST00000569711 PPIP5K1Q6PFW1 1433 aa13.59□□□□□ -0.23
LINC01654-201ENST00000569711 POGKQ9P215 609 aa13.59□□□□□ -0.23
LINC01654-201ENST00000569711 ALKQ9UM73 1620 aa13.59□□□□□ -0.23
LINC01654-201ENST00000569711 U2SURPO15042 1029 aaKnown RBP13.58□□□□□ -0.23
LINC01654-201ENST00000569711 CALD1Q05682 793 aaKnown RBP13.58□□□□□ -0.23
LINC01654-201ENST00000569711 EXOSC9Q06265 439 aaKnown RBP13.57□□□□□ -0.24
LINC01654-201ENST00000569711 PRAM1Q96QH2 718 aa13.57□□□□□ -0.24
LINC01654-201ENST00000569711 BCL2L13Q9BXK5 485 aa13.57□□□□□ -0.24
LINC01654-201ENST00000569711 MYO5BQ9ULV0 1848 aa13.57□□□□□ -0.24
LINC01654-201ENST00000569711 SEC24BO95487 1268 aa13.57□□□□□ -0.24
LINC01654-201ENST00000569711 TRIM27P14373 513 aa13.57□□□□□ -0.24
LINC01654-201ENST00000569711 GGNBP2Q9H3C7 697 aa13.57□□□□□ -0.24
LINC01654-201ENST00000569711 FRAT2O75474 233 aaPredicted RBP13.56□□□□□ -0.24
LINC01654-201ENST00000569711 SMC5Q8IY18 1101 aa13.56□□□□□ -0.24
LINC01654-201ENST00000569711 RIPK4P57078 832 aa13.56□□□□□ -0.24
LINC01654-201ENST00000569711 SSH1Q8WYL5 1049 aa13.56□□□□□ -0.24
LINC01654-201ENST00000569711 AGLP35573 1532 aa13.56□□□□□ -0.24
LINC01654-201ENST00000569711 YEATS2Q9ULM3 1422 aa13.56□□□□□ -0.24
LINC01654-201ENST00000569711 NUTM2DQ5VT03 806 aaPredicted RBP13.55□□□□□ -0.24
LINC01654-201ENST00000569711 STK26Q9P289 416 aa13.55□□□□□ -0.24
LINC01654-201ENST00000569711 TSR2Q969E8 191 aaKnown RBP13.55□□□□□ -0.24
LINC01654-201ENST00000569711 TNNQ9UQP3 1299 aa13.54□□□□□ -0.24
LINC01654-201ENST00000569711 FAM135BQ49AJ0 1406 aa13.54□□□□□ -0.24
LINC01654-201ENST00000569711 ITPRIPQ8IWB1 547 aa13.54□□□□□ -0.24
LINC01654-201ENST00000569711 ARHGAP45Q92619 1136 aa13.54□□□□□ -0.24
LINC01654-201ENST00000569711 CDK19Q9BWU1 502 aa13.54□□□□□ -0.24
LINC01654-201ENST00000569711 ANTXR1Q9H6X2 564 aa13.54□□□□□ -0.24
LINC01654-201ENST00000569711 ZBTB40Q9NUA8 1239 aa13.54□□□□□ -0.24
LINC01654-201ENST00000569711 MINK1Q8N4C8 1332 aaPredicted RBP13.54□□□□□ -0.24
LINC01654-201ENST00000569711 EIF5BO60841 1220 aaKnown RBP13.53□□□□□ -0.24
LINC01654-201ENST00000569711 SAFB2Q14151 953 aaKnown RBP eCLIP13.53□□□□□ -0.24
LINC01654-201ENST00000569711 NOB1Q9ULX3 412 aaKnown RBP13.53□□□□□ -0.24
LINC01654-201ENST00000569711 LRRC7Q96NW7 1537 aa13.52□□□□□ -0.25
LINC01654-201ENST00000569711 C22orf23Q9BZE7 217 aa13.51□□□□□ -0.25
LINC01654-201ENST00000569711 SPATA31D1Q6ZQQ2 1576 aa13.51□□□□□ -0.25
LINC01654-201ENST00000569711 EDC4Q6P2E9 1401 aaKnown RBP13.51□□□□□ -0.25
LINC01654-201ENST00000569711 AATKQ6ZMQ8 1374 aa13.51□□□□□ -0.25
LINC01654-201ENST00000569711 TBC1D2Q9BYX2 928 aa13.51□□□□□ -0.25
LINC01654-201ENST00000569711 PIK3R4Q99570 1358 aa13.5□□□□□ -0.25
LINC01654-201ENST00000569711 LMOD3Q0VAK6 560 aa13.5□□□□□ -0.25
LINC01654-201ENST00000569711 RSPH6AQ9H0K4 717 aa13.5□□□□□ -0.25
LINC01654-201ENST00000569711 CABP1Q9NZU7 370 aa13.5□□□□□ -0.25
LINC01654-201ENST00000569711 CDK12Q9NYV4 1490 aaPredicted RBP13.5□□□□□ -0.25
LINC01654-201ENST00000569711 NUCB1Q02818 461 aa13.5□□□□□ -0.25
LINC01654-201ENST00000569711 L1TD1Q5T7N2 865 aaKnown RBP13.5□□□□□ -0.25
LINC01654-201ENST00000569711 TMEM57Q8N5G2 664 aa13.5□□□□□ -0.25
LINC01654-201ENST00000569711 STAG3Q9UJ98 1225 aa13.5□□□□□ -0.25
LINC01654-201ENST00000569711 NFE2L2Q16236 605 aa13.49□□□□□ -0.25
LINC01654-201ENST00000569711 IL27Q8NEV9 243 aa13.49□□□□□ -0.25
LINC01654-201ENST00000569711 GCC1Q96CN9 775 aa13.49□□□□□ -0.25
LINC01654-201ENST00000569711 SIRT1Q96EB6 747 aa13.49□□□□□ -0.25
LINC01654-201ENST00000569711 IFT57Q9NWB7 429 aa13.49□□□□□ -0.25
LINC01654-201ENST00000569711 A2ML1A8K2U0 1454 aa13.49□□□□□ -0.25
LINC01654-201ENST00000569711 SETD1AO15047 1707 aaKnown RBP13.49□□□□□ -0.25
LINC01654-201ENST00000569711 GNAI1P63096 354 aa13.49□□□□□ -0.25
LINC01654-201ENST00000569711 PTCH1Q13635 1447 aa13.49□□□□□ -0.25
LINC01654-201ENST00000569711 CPSF1Q10570 1443 aaKnown RBP13.48□□□□□ -0.25
LINC01654-201ENST00000569711 CFAP44Q96MT7 982 aa13.48□□□□□ -0.25
LINC01654-201ENST00000569711 POLKQ9UBT6 870 aa13.48□□□□□ -0.25
LINC01654-201ENST00000569711 KIF24Q5T7B8 1368 aa13.48□□□□□ -0.25
LINC01654-201ENST00000569711 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC01654-201ENST00000569711 RIMBP3CA6NJZ7 1639 aa13.47□□□□□ -0.25
LINC01654-201ENST00000569711 RIMBP3BA6NNM3 1639 aa13.47□□□□□ -0.25
LINC01654-201ENST00000569711 RIMBP3Q9UFD9 1639 aa13.47□□□□□ -0.25
LINC01654-201ENST00000569711 CHMP5Q9NZZ3 219 aa13.47□□□□□ -0.25
LINC01654-201ENST00000569711 RIMS2Q9UQ26 1411 aa13.47□□□□□ -0.25
LINC01654-201ENST00000569711 PRKAR2BP31323 418 aa13.47□□□□□ -0.25
LINC01654-201ENST00000569711 RBM25P49756 843 aaKnown RBP13.47□□□□□ -0.25
LINC01654-201ENST00000569711 HAP1P54257 671 aaPredicted RBP13.47□□□□□ -0.25
LINC01654-201ENST00000569711 PRKCSHP14314 528 aaPredicted RBP13.46□□□□□ -0.25
LINC01654-201ENST00000569711 SLKQ9H2G2 1235 aaPredicted RBP13.46□□□□□ -0.25
LINC01654-201ENST00000569711 KNDC1Q76NI1 1749 aa13.46□□□□□ -0.26
LINC01654-201ENST00000569711 BMP2KLQ5H9B9 411 aa13.46□□□□□ -0.26
LINC01654-201ENST00000569711 CHD1LQ86WJ1 897 aa13.46□□□□□ -0.26
LINC01654-201ENST00000569711 SNX21Q969T3 373 aa13.46□□□□□ -0.26
LINC01654-201ENST00000569711 HSCBQ8IWL3 235 aa13.45□□□□□ -0.26
LINC01654-201ENST00000569711 ZNF853P0CG23 659 aa13.45□□□□□ -0.26
LINC01654-201ENST00000569711 HDGFP51858 240 aaKnown RBP13.45□□□□□ -0.26
LINC01654-201ENST00000569711 TECPR2O15040 1411 aa13.44□□□□□ -0.26
LINC01654-201ENST00000569711 FBXO31Q5XUX0 539 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms