RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 TERF2IPQ9NYB0 399 aa7.11□□□□□ -1.27
SF3B3-213ENST00000569687 QRICH2Q9H0J4 1663 aa7.11□□□□□ -1.27
SF3B3-213ENST00000569687 USP32Q8NFA0 1604 aa7.11□□□□□ -1.27
SF3B3-213ENST00000569687 TULP4Q9NRJ4 1543 aa7.11□□□□□ -1.27
SF3B3-213ENST00000569687 TMEM2Q9UHN6 1383 aa7.1□□□□□ -1.27
SF3B3-213ENST00000569687 STK25O00506 426 aa7.1□□□□□ -1.27
SF3B3-213ENST00000569687 NUBP1P53384 320 aa7.1□□□□□ -1.27
SF3B3-213ENST00000569687 GOLGA2Q08379 1002 aa7.1□□□□□ -1.27
SF3B3-213ENST00000569687 DCAF8Q5TAQ9 597 aa7.1□□□□□ -1.27
SF3B3-213ENST00000569687 CDK19Q9BWU1 502 aa7.1□□□□□ -1.27
SF3B3-213ENST00000569687 ARHGEF28Q8N1W1 1705 aaKnown RBP7.1□□□□□ -1.27
SF3B3-213ENST00000569687 CEP170BQ9Y4F5 1589 aaPredicted RBP7.09□□□□□ -1.27
SF3B3-213ENST00000569687 MTHFSP49914 203 aa7.09□□□□□ -1.27
SF3B3-213ENST00000569687 SRPK2P78362 688 aaKnown RBP7.09□□□□□ -1.27
SF3B3-213ENST00000569687 DUSP27Q5VZP5 1158 aa7.09□□□□□ -1.27
SF3B3-213ENST00000569687 CFAP53Q96M91 514 aa7.09□□□□□ -1.27
SF3B3-213ENST00000569687 SALL2Q9Y467 1007 aaPredicted RBP7.09□□□□□ -1.27
SF3B3-213ENST00000569687 SLIT1O75093 1534 aa7.09□□□□□ -1.27
SF3B3-213ENST00000569687 MED14O60244 1454 aa7.09□□□□□ -1.27
SF3B3-213ENST00000569687 ARHGAP23Q9P227 1491 aa7.09□□□□□ -1.27
SF3B3-213ENST00000569687 ZNF142P52746 1687 aaPredicted RBP7.09□□□□□ -1.27
SF3B3-213ENST00000569687 FAM135BQ49AJ0 1406 aa7.09□□□□□ -1.28
SF3B3-213ENST00000569687 PLEKHH1Q9ULM0 1364 aa7.08□□□□□ -1.28
SF3B3-213ENST00000569687 APAF1O14727 1248 aa7.08□□□□□ -1.28
SF3B3-213ENST00000569687 FYB1O15117 783 aa7.08□□□□□ -1.28
SF3B3-213ENST00000569687 CCDC27Q2M243 656 aa7.08□□□□□ -1.28
SF3B3-213ENST00000569687 HDGFL2Q7Z4V5 671 aaPredicted RBP7.08□□□□□ -1.28
SF3B3-213ENST00000569687 RUNDC1Q96C34 613 aa7.08□□□□□ -1.28
SF3B3-213ENST00000569687 TECPR2O15040 1411 aa7.08□□□□□ -1.28
SF3B3-213ENST00000569687 NRXN3Q9Y4C0 1643 aa7.08□□□□□ -1.28
SF3B3-213ENST00000569687 SETD1AO15047 1707 aaKnown RBP7.07□□□□□ -1.28
SF3B3-213ENST00000569687 MINK1Q8N4C8 1332 aaPredicted RBP7.07□□□□□ -1.28
SF3B3-213ENST00000569687 E9PSI1 815 aa7.07□□□□□ -1.28
SF3B3-213ENST00000569687 WASLO00401 505 aaPredicted RBP7.07□□□□□ -1.28
SF3B3-213ENST00000569687 B4GALNT3Q6L9W6 998 aa7.07□□□□□ -1.28
SF3B3-213ENST00000569687 WDR63Q8IWG1 891 aa7.07□□□□□ -1.28
SF3B3-213ENST00000569687 CABP1Q9NZU7 370 aa7.07□□□□□ -1.28
SF3B3-213ENST00000569687 DAXXQ9UER7 740 aaPredicted RBP7.07□□□□□ -1.28
SF3B3-213ENST00000569687 A0A1W2PP64 1363 aa7.07□□□□□ -1.28
SF3B3-213ENST00000569687 PLEKHG1Q9ULL1 1385 aa7.07□□□□□ -1.28
SF3B3-213ENST00000569687 CD163L1Q9NR16 1453 aa7.06□□□□□ -1.28
SF3B3-213ENST00000569687 SENP3-EIF4A1A0A087X0R7 540 aa7.06□□□□□ -1.28
SF3B3-213ENST00000569687 SAFB2Q14151 953 aaKnown RBP eCLIP7.06□□□□□ -1.28
SF3B3-213ENST00000569687 WAPLQ7Z5K2 1190 aa7.06□□□□□ -1.28
SF3B3-213ENST00000569687 WWC1Q8IX03 1113 aa7.06□□□□□ -1.28
SF3B3-213ENST00000569687 THEMISQ8N1K5 641 aaPredicted RBP7.06□□□□□ -1.28
SF3B3-213ENST00000569687 CCDC136Q96JN2 1154 aa7.06□□□□□ -1.28
SF3B3-213ENST00000569687 RBM19Q9Y4C8 960 aaKnown RBP7.06□□□□□ -1.28
SF3B3-213ENST00000569687 METP08581 1390 aa7.06□□□□□ -1.28
SF3B3-213ENST00000569687 PNPLA6Q8IY17 1366 aa7.06□□□□□ -1.28
SF3B3-213ENST00000569687 ADAMTS13Q76LX8 1427 aa7.05□□□□□ -1.28
SF3B3-213ENST00000569687 LTKP29376 864 aa7.05□□□□□ -1.28
SF3B3-213ENST00000569687 C14orf37Q86TY3 774 aa7.05□□□□□ -1.28
SF3B3-213ENST00000569687 CCDC146Q8IYE0 955 aa7.05□□□□□ -1.28
SF3B3-213ENST00000569687 TBX22Q9Y458 520 aa7.05□□□□□ -1.28
SF3B3-213ENST00000569687 EID1Q9Y6B2 187 aa7.05□□□□□ -1.28
SF3B3-213ENST00000569687 CCDC61Q9Y6R9 512 aa7.05□□□□□ -1.28
SF3B3-213ENST00000569687 ATP7BP35670 1465 aa7.04□□□□□ -1.28
SF3B3-213ENST00000569687 DIP2AQ14689 1571 aa7.04□□□□□ -1.28
SF3B3-213ENST00000569687 CPSF1Q10570 1443 aaKnown RBP7.04□□□□□ -1.28
SF3B3-213ENST00000569687 TXNDC2Q86VQ3 553 aa7.04□□□□□ -1.28
SF3B3-213ENST00000569687 TCP11L2Q8N4U5 519 aa7.04□□□□□ -1.28
SF3B3-213ENST00000569687 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-213ENST00000569687 EXOC6Q8TAG9 804 aa7.04□□□□□ -1.28
SF3B3-213ENST00000569687 PNNQ9H307 717 aaKnown RBP7.04□□□□□ -1.28
SF3B3-213ENST00000569687 PLEKHG3A1L390 1219 aa7.03□□□□□ -1.28
SF3B3-213ENST00000569687 TNNT2P45379 298 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-213ENST00000569687 NUDT16Q96DE0 195 aaKnown RBP7.03□□□□□ -1.28
SF3B3-213ENST00000569687 PLEKHF1Q96S99 279 aa7.03□□□□□ -1.28
SF3B3-213ENST00000569687 STK24Q9Y6E0 443 aa7.03□□□□□ -1.28
SF3B3-213ENST00000569687 KNDC1Q76NI1 1749 aa7.03□□□□□ -1.28
SF3B3-213ENST00000569687 CPS1P31327 1500 aa7.02□□□□□ -1.29
SF3B3-213ENST00000569687 KDM4FA0A1W2PPD8 638 aa7.02□□□□□ -1.29
SF3B3-213ENST00000569687 FCHSD2O94868 740 aa7.02□□□□□ -1.29
SF3B3-213ENST00000569687 BCL11BQ9C0K0 894 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-213ENST00000569687 GGNBP2Q9H3C7 697 aa7.02□□□□□ -1.29
SF3B3-213ENST00000569687 NKTRP30414 1462 aaKnown RBP7.02□□□□□ -1.29
SF3B3-213ENST00000569687 SETD1BQ9UPS6 1966 aaKnown RBP7.02□□□□□ -1.29
SF3B3-213ENST00000569687 SHPRHQ149N8 1683 aa7.01□□□□□ -1.29
SF3B3-213ENST00000569687 CDC42BPGQ6DT37 1551 aa7.01□□□□□ -1.29
SF3B3-213ENST00000569687 COL3A1P02461 1466 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-213ENST00000569687 AATKQ6ZMQ8 1374 aa7.01□□□□□ -1.29
SF3B3-213ENST00000569687 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-213ENST00000569687 DIAPH1O60610 1272 aaKnown RBP7.01□□□□□ -1.29
SF3B3-213ENST00000569687 CT47B1P0C2W7 299 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-213ENST00000569687 U2AF1L5P0DN76 240 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-213ENST00000569687 CHRM1P11229 460 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-213ENST00000569687 U2AF1Q01081 240 aaKnown RBP eCLIP7.01□□□□□ -1.29
SF3B3-213ENST00000569687 AAMPQ13685 434 aa7.01□□□□□ -1.29
SF3B3-213ENST00000569687 PDE3AQ14432 1141 aa7.01□□□□□ -1.29
SF3B3-213ENST00000569687 ZFP91Q96JP5 570 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-213ENST00000569687 RYDENQ9NUL5 291 aaKnown RBP7.01□□□□□ -1.29
SF3B3-213ENST00000569687 POLKQ9UBT6 870 aa7.01□□□□□ -1.29
SF3B3-213ENST00000569687 EDC4Q6P2E9 1401 aaKnown RBP7.01□□□□□ -1.29
SF3B3-213ENST00000569687 IL16Q14005 1332 aa7.01□□□□□ -1.29
SF3B3-213ENST00000569687 FANCIQ9NVI1 1328 aa7.01□□□□□ -1.29
SF3B3-213ENST00000569687 IQSEC2Q5JU85 1478 aa7□□□□□ -1.29
SF3B3-213ENST00000569687 ROBO2Q9HCK4 1378 aa7□□□□□ -1.29
SF3B3-213ENST00000569687 TCERG1O14776 1098 aaKnown RBP7□□□□□ -1.29
SF3B3-213ENST00000569687 PLIN1O60240 522 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms