RNA–Protein interactions for RNA: ENST00000569601.5

RPUSD1-210, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-210ENST00000569601 CENPJQ9HC77 1338 aaPredicted RBP33.8■■■■□ 3
RPUSD1-210ENST00000569601 VPS72Q15906 364 aa33.8■■■■□ 3
RPUSD1-210ENST00000569601 TRPM1Q7Z4N2 1603 aa33.79■■■■□ 3
RPUSD1-210ENST00000569601 BRWD3Q6RI45 1802 aa33.79■■■■□ 3
RPUSD1-210ENST00000569601 NRAPQ86VF7 1730 aa33.79■■■■□ 3
RPUSD1-210ENST00000569601 CCDC61Q9Y6R9 512 aa33.78■■■■□ 3
RPUSD1-210ENST00000569601 COL14A1Q05707 1796 aaKnown RBP33.77■■■■□ 3
RPUSD1-210ENST00000569601 EP400Q96L91 3159 aa33.77■■■■□ 3
RPUSD1-210ENST00000569601 POLR3AO14802 1390 aaPredicted RBP33.77■■■■□ 3
RPUSD1-210ENST00000569601 ACEP12821 1306 aa33.77■■■■□ 3
RPUSD1-210ENST00000569601 CCDC9Q9Y3X0 531 aaKnown RBP33.75■■■□□ 2.99
RPUSD1-210ENST00000569601 PLEKHG3A1L390 1219 aa33.74■■■□□ 2.99
RPUSD1-210ENST00000569601 NBPF8Q3BBV2 869 aa33.73■■■□□ 2.99
RPUSD1-210ENST00000569601 BTG4Q9NY30 223 aa33.73■■■□□ 2.99
RPUSD1-210ENST00000569601 SRPK2P78362 688 aaKnown RBP33.72■■■□□ 2.99
RPUSD1-210ENST00000569601 PHRF1Q9P1Y6 1649 aaKnown RBP33.71■■■□□ 2.99
RPUSD1-210ENST00000569601 CABP2Q9NPB3 220 aa33.7■■■□□ 2.99
RPUSD1-210ENST00000569601 SEPT12Q8IYM1 358 aa33.69■■■□□ 2.98
RPUSD1-210ENST00000569601 NUTM2GQ5VZR2 741 aa33.68■■■□□ 2.98
RPUSD1-210ENST00000569601 PPIP5K1Q6PFW1 1433 aa33.68■■■□□ 2.98
RPUSD1-210ENST00000569601 ONECUT3O60422 494 aaPredicted RBP33.66■■■□□ 2.98
RPUSD1-210ENST00000569601 ROCK2O75116 1388 aaKnown RBP33.65■■■□□ 2.98
RPUSD1-210ENST00000569601 PRDM11Q9NQV5 511 aa33.65■■■□□ 2.98
RPUSD1-210ENST00000569601 KIAA0232Q92628 1395 aa33.62■■■□□ 2.97
RPUSD1-210ENST00000569601 CCDC125Q86Z20 511 aa33.62■■■□□ 2.97
RPUSD1-210ENST00000569601 ABTB2Q8N961 1025 aa33.6■■■□□ 2.97
RPUSD1-210ENST00000569601 ZC3H6P61129 1189 aaKnown RBP33.58■■■□□ 2.97
RPUSD1-210ENST00000569601 CHRNA2Q15822 529 aa33.58■■■□□ 2.97
RPUSD1-210ENST00000569601 FAM98CQ17RN3 349 aaKnown RBP33.58■■■□□ 2.97
RPUSD1-210ENST00000569601 NRKQ7Z2Y5 1582 aa33.58■■■□□ 2.97
RPUSD1-210ENST00000569601 CABP1Q9NZU7 370 aa33.57■■■□□ 2.96
RPUSD1-210ENST00000569601 EVC2Q86UK5 1308 aa33.56■■■□□ 2.96
RPUSD1-210ENST00000569601 A0A0G2JS52 829 aa33.56■■■□□ 2.96
RPUSD1-210ENST00000569601 MYT1Q01538 1121 aa33.56■■■□□ 2.96
RPUSD1-210ENST00000569601 KRT27Q7Z3Y8 459 aa33.56■■■□□ 2.96
RPUSD1-210ENST00000569601 SPATA31A5Q5VU36 1347 aa33.55■■■□□ 2.96
RPUSD1-210ENST00000569601 SPATA31A7Q8IWB4 1347 aa33.55■■■□□ 2.96
RPUSD1-210ENST00000569601 BLMP54132 1417 aaPredicted RBP33.53■■■□□ 2.96
RPUSD1-210ENST00000569601 USP19O94966 1318 aa33.53■■■□□ 2.96
RPUSD1-210ENST00000569601 BRD4O60885 1362 aaPredicted RBP33.51■■■□□ 2.96
RPUSD1-210ENST00000569601 USP6P35125 1406 aa33.51■■■□□ 2.95
RPUSD1-210ENST00000569601 NLRP13Q86W25 1043 aa33.5■■■□□ 2.95
RPUSD1-210ENST00000569601 THSD7AQ9UPZ6 1657 aa33.49■■■□□ 2.95
RPUSD1-210ENST00000569601 STRN4Q9NRL3 753 aa33.49■■■□□ 2.95
RPUSD1-210ENST00000569601 TONSLQ96HA7 1378 aa33.47■■■□□ 2.95
RPUSD1-210ENST00000569601 TRIM26Q12899 539 aaPredicted RBP33.46■■■□□ 2.95
RPUSD1-210ENST00000569601 SPATA31A1Q5TZJ5 1347 aa33.46■■■□□ 2.95
RPUSD1-210ENST00000569601 CPDO75976 1380 aa33.46■■■□□ 2.95
RPUSD1-210ENST00000569601 LMO7Q8WWI1 1683 aa33.45■■■□□ 2.95
RPUSD1-210ENST00000569601 AKAP12Q02952 1782 aa33.45■■■□□ 2.95
RPUSD1-210ENST00000569601 CAMTA1Q9Y6Y1 1673 aa33.45■■■□□ 2.94
RPUSD1-210ENST00000569601 GCP02774 474 aa33.44■■■□□ 2.94
RPUSD1-210ENST00000569601 SSH2Q76I76 1423 aa33.44■■■□□ 2.94
RPUSD1-210ENST00000569601 PIK3C2AO00443 1686 aa33.43■■■□□ 2.94
RPUSD1-210ENST00000569601 CARD11Q9BXL7 1154 aa33.43■■■□□ 2.94
RPUSD1-210ENST00000569601 SF3B2Q13435 895 aaKnown RBP33.42■■■□□ 2.94
RPUSD1-210ENST00000569601 DEFB132Q7Z7B7 95 aa33.42■■■□□ 2.94
RPUSD1-210ENST00000569601 EVA1CP58658 441 aa33.41■■■□□ 2.94
RPUSD1-210ENST00000569601 NLRP6P59044 892 aa33.41■■■□□ 2.94
RPUSD1-210ENST00000569601 ZRANB1Q9UGI0 708 aa33.41■■■□□ 2.94
RPUSD1-210ENST00000569601 SLIT3O75094 1523 aa33.39■■■□□ 2.94
RPUSD1-210ENST00000569601 FAM182BQ5T319 152 aa33.38■■■□□ 2.93
RPUSD1-210ENST00000569601 SBNO2Q9Y2G9 1366 aa33.37■■■□□ 2.93
RPUSD1-210ENST00000569601 USP35Q9P2H5 1018 aa33.37■■■□□ 2.93
RPUSD1-210ENST00000569601 LARP1Q6PKG0 1096 aaKnown RBP33.36■■■□□ 2.93
RPUSD1-210ENST00000569601 ZNF692Q9BU19 519 aaPredicted RBP33.36■■■□□ 2.93
RPUSD1-210ENST00000569601 TTC21BQ7Z4L5 1316 aa33.34■■■□□ 2.93
RPUSD1-210ENST00000569601 RGPD1P0DJD0 1748 aa33.33■■■□□ 2.93
RPUSD1-210ENST00000569601 ZBTB7CA1YPR0 619 aa33.33■■■□□ 2.93
RPUSD1-210ENST00000569601 CPSF1Q10570 1443 aaKnown RBP33.33■■■□□ 2.93
RPUSD1-210ENST00000569601 COL5A2P05997 1499 aaPredicted RBP33.31■■■□□ 2.92
RPUSD1-210ENST00000569601 MON2Q7Z3U7 1717 aa33.31■■■□□ 2.92
RPUSD1-210ENST00000569601 BARGINQ6ZT62 677 aa33.3■■■□□ 2.92
RPUSD1-210ENST00000569601 COL18A1P39060 1754 aa33.29■■■□□ 2.92
RPUSD1-210ENST00000569601 KTN1Q86UP2 1357 aaKnown RBP33.29■■■□□ 2.92
RPUSD1-210ENST00000569601 AATKQ6ZMQ8 1374 aa33.28■■■□□ 2.92
RPUSD1-210ENST00000569601 TTC21AQ8NDW8 1320 aa33.28■■■□□ 2.92
RPUSD1-210ENST00000569601 BAG6P46379 1132 aa33.27■■■□□ 2.92
RPUSD1-210ENST00000569601 TCP11L2Q8N4U5 519 aa33.27■■■□□ 2.92
RPUSD1-210ENST00000569601 TNS1Q9HBL0 1735 aaKnown RBP33.26■■■□□ 2.92
RPUSD1-210ENST00000569601 SRCAPQ6ZRS2 3230 aa33.24■■■□□ 2.91
RPUSD1-210ENST00000569601 RGPD5Q99666 1765 aa33.24■■■□□ 2.91
RPUSD1-210ENST00000569601 CRB1P82279 1406 aa33.23■■■□□ 2.91
RPUSD1-210ENST00000569601 CD163L1Q9NR16 1453 aa33.23■■■□□ 2.91
RPUSD1-210ENST00000569601 THRAP3Q9Y2W1 955 aaKnown RBP33.22■■■□□ 2.91
RPUSD1-210ENST00000569601 SOX12O15370 315 aa33.21■■■□□ 2.91
RPUSD1-210ENST00000569601 PARP4Q9UKK3 1724 aaKnown RBP33.21■■■□□ 2.91
RPUSD1-210ENST00000569601 PDE3BQ13370 1112 aa33.2■■■□□ 2.91
RPUSD1-210ENST00000569601 FAM196AQ6ZSG2 479 aa33.2■■■□□ 2.91
RPUSD1-210ENST00000569601 KCNH5Q8NCM2 988 aa33.2■■■□□ 2.91
RPUSD1-210ENST00000569601 TMC1Q8TDI8 760 aa33.2■■■□□ 2.91
RPUSD1-210ENST00000569601 EN1Q05925 392 aaPredicted RBP33.19■■■□□ 2.9
RPUSD1-210ENST00000569601 ARHGEF25Q86VW2 580 aa33.19■■■□□ 2.9
RPUSD1-210ENST00000569601 AXIN2Q9Y2T1 843 aa33.19■■■□□ 2.9
RPUSD1-210ENST00000569601 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.18■■■□□ 2.9
RPUSD1-210ENST00000569601 NFAT5O94916 1531 aa33.18■■■□□ 2.9
RPUSD1-210ENST00000569601 SLC12A5Q9H2X9 1139 aa33.17■■■□□ 2.9
RPUSD1-210ENST00000569601 TRIM37O94972 964 aa33.16■■■□□ 2.9
RPUSD1-210ENST00000569601 USP54Q70EL1 1684 aa33.16■■■□□ 2.9
RPUSD1-210ENST00000569601 DISP2A7MBM2 1401 aa33.15■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms