RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 PLSCR1O15162 318 aa10.52□□□□□ -0.73
HERPUD1-217ENST00000569429 PSME1Q06323 249 aa10.52□□□□□ -0.73
HERPUD1-217ENST00000569429 FMN2Q9NZ56 1722 aa10.52□□□□□ -0.73
HERPUD1-217ENST00000569429 SPATA31A1Q5TZJ5 1347 aa10.52□□□□□ -0.73
HERPUD1-217ENST00000569429 DNAJC5GQ8N7S2 189 aa10.51□□□□□ -0.73
HERPUD1-217ENST00000569429 CHIC2Q9UKJ5 165 aa10.51□□□□□ -0.73
HERPUD1-217ENST00000569429 NAIPQ13075 1403 aa10.5□□□□□ -0.73
HERPUD1-217ENST00000569429 ANKRD50Q9ULJ7 1429 aa10.5□□□□□ -0.73
HERPUD1-217ENST00000569429 PDE3BQ13370 1112 aa10.5□□□□□ -0.73
HERPUD1-217ENST00000569429 ZNF326Q5BKZ1 582 aaKnown RBP10.5□□□□□ -0.73
HERPUD1-217ENST00000569429 TNS4Q8IZW8 715 aa10.5□□□□□ -0.73
HERPUD1-217ENST00000569429 MTFR1LQ9H019 292 aa10.5□□□□□ -0.73
HERPUD1-217ENST00000569429 NUTM2FA1L443 756 aa10.49□□□□□ -0.73
HERPUD1-217ENST00000569429 C11orf95C9JLR9 678 aaPredicted RBP10.49□□□□□ -0.73
HERPUD1-217ENST00000569429 ARXQ96QS3 562 aa10.49□□□□□ -0.73
HERPUD1-217ENST00000569429 ATP10DQ9P241 1426 aa10.49□□□□□ -0.73
HERPUD1-217ENST00000569429 PLEKHG5O94827 1062 aa10.48□□□□□ -0.73
HERPUD1-217ENST00000569429 APLP1P51693 650 aa10.48□□□□□ -0.73
HERPUD1-217ENST00000569429 GPBP1L1Q9HC44 474 aaPredicted RBP10.48□□□□□ -0.73
HERPUD1-217ENST00000569429 LMOD2Q6P5Q4 547 aa10.47□□□□□ -0.73
HERPUD1-217ENST00000569429 BARGINQ6ZT62 677 aa10.47□□□□□ -0.73
HERPUD1-217ENST00000569429 KIF1BO60333 1816 aa10.47□□□□□ -0.73
HERPUD1-217ENST00000569429 BCL11BQ9C0K0 894 aaPredicted RBP10.46□□□□□ -0.73
HERPUD1-217ENST00000569429 CRYBG1Q9Y4K1 1723 aa10.46□□□□□ -0.74
HERPUD1-217ENST00000569429 PEAK1Q9H792 1746 aa10.45□□□□□ -0.74
HERPUD1-217ENST00000569429 NRXN1Q9ULB1 1477 aa10.45□□□□□ -0.74
HERPUD1-217ENST00000569429 PHF8Q9UPP1 1060 aa10.45□□□□□ -0.74
HERPUD1-217ENST00000569429 TRPM3Q9HCF6 1732 aaPredicted RBP10.44□□□□□ -0.74
HERPUD1-217ENST00000569429 PARP4Q9UKK3 1724 aaKnown RBP10.44□□□□□ -0.74
HERPUD1-217ENST00000569429 ALS2Q96Q42 1657 aa10.44□□□□□ -0.74
HERPUD1-217ENST00000569429 GRIN3BO60391 1043 aa10.44□□□□□ -0.74
HERPUD1-217ENST00000569429 SLC15A2Q16348 729 aa10.44□□□□□ -0.74
HERPUD1-217ENST00000569429 PROM2Q8N271 834 aa10.44□□□□□ -0.74
HERPUD1-217ENST00000569429 STK32BQ9NY57 414 aa10.44□□□□□ -0.74
HERPUD1-217ENST00000569429 COL24A1Q17RW2 1714 aa10.44□□□□□ -0.74
HERPUD1-217ENST00000569429 IFT172Q9UG01 1749 aa10.44□□□□□ -0.74
HERPUD1-217ENST00000569429 TECPR2O15040 1411 aa10.43□□□□□ -0.74
HERPUD1-217ENST00000569429 VGFO15240 615 aaPredicted RBP10.43□□□□□ -0.74
HERPUD1-217ENST00000569429 KANK4Q5T7N3 995 aaPredicted RBP10.43□□□□□ -0.74
HERPUD1-217ENST00000569429 ADCY9O60503 1353 aa10.42□□□□□ -0.74
HERPUD1-217ENST00000569429 JMYQ8N9B5 988 aa10.42□□□□□ -0.74
HERPUD1-217ENST00000569429 WDR90Q96KV7 1748 aa10.41□□□□□ -0.74
HERPUD1-217ENST00000569429 AATKQ6ZMQ8 1374 aa10.41□□□□□ -0.74
HERPUD1-217ENST00000569429 PELP1Q8IZL8 1130 aaKnown RBP10.41□□□□□ -0.74
HERPUD1-217ENST00000569429 PRDM11Q9NQV5 511 aa10.41□□□□□ -0.74
HERPUD1-217ENST00000569429 KNDC1Q76NI1 1749 aa10.41□□□□□ -0.74
HERPUD1-217ENST00000569429 WAPLQ7Z5K2 1190 aa10.4□□□□□ -0.74
HERPUD1-217ENST00000569429 OVOS2A0A0G2JMS6 1433 aa10.4□□□□□ -0.75
HERPUD1-217ENST00000569429 OVOS2A0A0J9YW53 1432 aa10.4□□□□□ -0.75
HERPUD1-217ENST00000569429 OVOS2Q6IE36 1432 aa10.4□□□□□ -0.75
HERPUD1-217ENST00000569429 CLTCL1P53675 1640 aa10.4□□□□□ -0.75
HERPUD1-217ENST00000569429 KIF3CO14782 793 aa10.39□□□□□ -0.75
HERPUD1-217ENST00000569429 STRN4Q9NRL3 753 aa10.39□□□□□ -0.75
HERPUD1-217ENST00000569429 USP35Q9P2H5 1018 aa10.39□□□□□ -0.75
HERPUD1-217ENST00000569429 DHX57Q6P158 1386 aaKnown RBP10.39□□□□□ -0.75
HERPUD1-217ENST00000569429 YBX3P16989 372 aaKnown RBP eCLIP10.38□□□□□ -0.75
HERPUD1-217ENST00000569429 TCP11L2Q8N4U5 519 aa10.38□□□□□ -0.75
HERPUD1-217ENST00000569429 KLRG1Q96E93 195 aa10.38□□□□□ -0.75
HERPUD1-217ENST00000569429 WWC3Q9ULE0 1092 aa10.38□□□□□ -0.75
HERPUD1-217ENST00000569429 THRAP3Q9Y2W1 955 aaKnown RBP10.38□□□□□ -0.75
HERPUD1-217ENST00000569429 PPLO60437 1756 aa10.38□□□□□ -0.75
HERPUD1-217ENST00000569429 KAT6BQ8WYB5 2073 aa10.37□□□□□ -0.75
HERPUD1-217ENST00000569429 TXNRD1Q16881 649 aa10.37□□□□□ -0.75
HERPUD1-217ENST00000569429 SSH2Q76I76 1423 aa10.37□□□□□ -0.75
HERPUD1-217ENST00000569429 ATP7BP35670 1465 aa10.36□□□□□ -0.75
HERPUD1-217ENST00000569429 ZNF526Q8TF50 670 aaPredicted RBP10.36□□□□□ -0.75
HERPUD1-217ENST00000569429 KIAA0232Q92628 1395 aa10.36□□□□□ -0.75
HERPUD1-217ENST00000569429 ABCC11Q96J66 1382 aa10.36□□□□□ -0.75
HERPUD1-217ENST00000569429 PLEKHH1Q9ULM0 1364 aa10.36□□□□□ -0.75
HERPUD1-217ENST00000569429 QSER1Q2KHR3 1735 aa10.36□□□□□ -0.75
HERPUD1-217ENST00000569429 TOPAZ1Q8N9V7 1692 aa10.35□□□□□ -0.75
HERPUD1-217ENST00000569429 PTF1AQ7RTS3 328 aa10.35□□□□□ -0.75
HERPUD1-217ENST00000569429 NLGN2Q8NFZ4 835 aa10.35□□□□□ -0.75
HERPUD1-217ENST00000569429 NUP155O75694 1391 aa10.35□□□□□ -0.75
HERPUD1-217ENST00000569429 ARHGEF28Q8N1W1 1705 aaKnown RBP10.35□□□□□ -0.75
HERPUD1-217ENST00000569429 RPGRIP1LQ68CZ1 1315 aa10.34□□□□□ -0.75
HERPUD1-217ENST00000569429 AKAP12Q02952 1782 aa10.34□□□□□ -0.75
HERPUD1-217ENST00000569429 BCL9O00512 1426 aa10.34□□□□□ -0.75
HERPUD1-217ENST00000569429 PAPPAQ13219 1627 aa10.34□□□□□ -0.75
HERPUD1-217ENST00000569429 EVA1CP58658 441 aa10.34□□□□□ -0.75
HERPUD1-217ENST00000569429 CHRNA2Q15822 529 aa10.34□□□□□ -0.75
HERPUD1-217ENST00000569429 KLHL34Q8N239 644 aa10.34□□□□□ -0.75
HERPUD1-217ENST00000569429 SLC16A10Q8TF71 515 aa10.34□□□□□ -0.75
HERPUD1-217ENST00000569429 PHRF1Q9P1Y6 1649 aaKnown RBP10.33□□□□□ -0.76
HERPUD1-217ENST00000569429 TOMM70O94826 608 aa10.33□□□□□ -0.76
HERPUD1-217ENST00000569429 POLD1P28340 1107 aa10.33□□□□□ -0.76
HERPUD1-217ENST00000569429 LARP1Q6PKG0 1096 aaKnown RBP10.33□□□□□ -0.76
HERPUD1-217ENST00000569429 LRRC37A3O60309 1634 aa10.33□□□□□ -0.76
HERPUD1-217ENST00000569429 PDE4DIPQ5VU43 2346 aa10.32□□□□□ -0.76
HERPUD1-217ENST00000569429 GPRASP1Q5JY77 1395 aa10.32□□□□□ -0.76
HERPUD1-217ENST00000569429 PMFBP1Q8TBY8 1022 aa10.32□□□□□ -0.76
HERPUD1-217ENST00000569429 SIRT1Q96EB6 747 aa10.32□□□□□ -0.76
HERPUD1-217ENST00000569429 STK26Q9P289 416 aa10.32□□□□□ -0.76
HERPUD1-217ENST00000569429 ANKARQ7Z5J8 1434 aa10.32□□□□□ -0.76
HERPUD1-217ENST00000569429 VPS8Q8N3P4 1428 aa10.31□□□□□ -0.76
HERPUD1-217ENST00000569429 LMO7Q8WWI1 1683 aa10.31□□□□□ -0.76
HERPUD1-217ENST00000569429 ACIN1Q9UKV3 1341 aaKnown RBP10.3□□□□□ -0.76
HERPUD1-217ENST00000569429 WNK3Q9BYP7 1800 aa10.29□□□□□ -0.76
HERPUD1-217ENST00000569429 ZC3H6P61129 1189 aaKnown RBP10.29□□□□□ -0.76
HERPUD1-217ENST00000569429 DDB1Q16531 1140 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms