RNA–Protein interactions for RNA: ENST00000569322.1

NUP93-218, Transcript of nucleoporin 93, humanhuman

TSL 3

Gene NUP93, Length 410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-218ENST00000569322 USP54Q70EL1 1684 aa11.62□□□□□ -0.55
NUP93-218ENST00000569322 ACEP12821 1306 aa11.61□□□□□ -0.55
NUP93-218ENST00000569322 BLMP54132 1417 aaPredicted RBP11.61□□□□□ -0.55
NUP93-218ENST00000569322 WDR43Q15061 677 aaKnown RBP eCLIP11.61□□□□□ -0.55
NUP93-218ENST00000569322 CFAP53Q96M91 514 aa11.61□□□□□ -0.55
NUP93-218ENST00000569322 SHPRHQ149N8 1683 aa11.61□□□□□ -0.55
NUP93-218ENST00000569322 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
NUP93-218ENST00000569322 TTC21AQ8NDW8 1320 aa11.6□□□□□ -0.55
NUP93-218ENST00000569322 NUTM2FA1L443 756 aa11.6□□□□□ -0.55
NUP93-218ENST00000569322 GGNBP2Q9H3C7 697 aa11.6□□□□□ -0.55
NUP93-218ENST00000569322 MAP2P11137 1827 aaKnown RBP11.6□□□□□ -0.55
NUP93-218ENST00000569322 XIRP1Q702N8 1843 aaKnown RBP11.6□□□□□ -0.55
NUP93-218ENST00000569322 LRRC7Q96NW7 1537 aa11.6□□□□□ -0.55
NUP93-218ENST00000569322 SSH2Q76I76 1423 aa11.6□□□□□ -0.55
NUP93-218ENST00000569322 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.59□□□□□ -0.55
NUP93-218ENST00000569322 NGDNQ8NEJ9 315 aaKnown RBP11.59□□□□□ -0.55
NUP93-218ENST00000569322 TTC21BQ7Z4L5 1316 aa11.59□□□□□ -0.55
NUP93-218ENST00000569322 TMEM94Q12767 1356 aa11.58□□□□□ -0.56
NUP93-218ENST00000569322 AATKQ6ZMQ8 1374 aa11.58□□□□□ -0.56
NUP93-218ENST00000569322 COG3Q96JB2 828 aa11.58□□□□□ -0.56
NUP93-218ENST00000569322 C19orf44Q9H6X5 657 aa11.58□□□□□ -0.56
NUP93-218ENST00000569322 OVOS2A0A0J9YW53 1432 aa11.58□□□□□ -0.56
NUP93-218ENST00000569322 OVOS2Q6IE36 1432 aa11.58□□□□□ -0.56
NUP93-218ENST00000569322 PIK3C2AO00443 1686 aa11.57□□□□□ -0.56
NUP93-218ENST00000569322 PHF8Q9UPP1 1060 aa11.57□□□□□ -0.56
NUP93-218ENST00000569322 SMG6Q86US8 1419 aaKnown RBP11.57□□□□□ -0.56
NUP93-218ENST00000569322 MSH6P52701 1360 aa11.56□□□□□ -0.56
NUP93-218ENST00000569322 TNNT2P45379 298 aaPredicted RBP11.56□□□□□ -0.56
NUP93-218ENST00000569322 PMFBP1Q8TBY8 1022 aa11.56□□□□□ -0.56
NUP93-218ENST00000569322 COL3A1P02461 1466 aaPredicted RBP11.56□□□□□ -0.56
NUP93-218ENST00000569322 CDK12Q9NYV4 1490 aaPredicted RBP11.56□□□□□ -0.56
NUP93-218ENST00000569322 USP31Q70CQ4 1352 aa11.55□□□□□ -0.56
NUP93-218ENST00000569322 MTHFSP49914 203 aa11.55□□□□□ -0.56
NUP93-218ENST00000569322 NME9Q86XW9 330 aa11.55□□□□□ -0.56
NUP93-218ENST00000569322 C1orf167Q5SNV9 1468 aa11.55□□□□□ -0.56
NUP93-218ENST00000569322 MST1RQ04912 1400 aa11.54□□□□□ -0.56
NUP93-218ENST00000569322 ATF3P18847 181 aa11.54□□□□□ -0.56
NUP93-218ENST00000569322 CADPS2Q86UW7 1296 aa11.54□□□□□ -0.56
NUP93-218ENST00000569322 RBM33Q96EV2 1170 aaKnown RBP11.54□□□□□ -0.56
NUP93-218ENST00000569322 MARF1Q9Y4F3 1742 aaKnown RBP11.54□□□□□ -0.56
NUP93-218ENST00000569322 ESCO1Q5FWF5 840 aa11.53□□□□□ -0.56
NUP93-218ENST00000569322 ADAMTS8Q9UP79 889 aa11.53□□□□□ -0.56
NUP93-218ENST00000569322 NUDCQ9Y266 331 aa11.53□□□□□ -0.56
NUP93-218ENST00000569322 PNPLA6Q8IY17 1366 aa11.53□□□□□ -0.56
NUP93-218ENST00000569322 TRPM3Q9HCF6 1732 aaPredicted RBP11.52□□□□□ -0.56
NUP93-218ENST00000569322 NGEFQ8N5V2 710 aa11.52□□□□□ -0.57
NUP93-218ENST00000569322 DCAF8L1A6NGE4 600 aa11.51□□□□□ -0.57
NUP93-218ENST00000569322 PSME1Q06323 249 aa11.5□□□□□ -0.57
NUP93-218ENST00000569322 POLKQ9UBT6 870 aa11.5□□□□□ -0.57
NUP93-218ENST00000569322 ZNF335Q9H4Z2 1342 aaPredicted RBP11.5□□□□□ -0.57
NUP93-218ENST00000569322 KIF24Q5T7B8 1368 aa11.5□□□□□ -0.57
NUP93-218ENST00000569322 DIAPH1O60610 1272 aaKnown RBP11.49□□□□□ -0.57
NUP93-218ENST00000569322 PDE3BQ13370 1112 aa11.49□□□□□ -0.57
NUP93-218ENST00000569322 ZRANB1Q9UGI0 708 aa11.49□□□□□ -0.57
NUP93-218ENST00000569322 ALS2Q96Q42 1657 aa11.49□□□□□ -0.57
NUP93-218ENST00000569322 ORAI2Q96SN7 254 aa11.48□□□□□ -0.57
NUP93-218ENST00000569322 PNNQ9H307 717 aaKnown RBP11.48□□□□□ -0.57
NUP93-218ENST00000569322 LTN1O94822 1766 aa11.48□□□□□ -0.57
NUP93-218ENST00000569322 PEAK1Q9H792 1746 aa11.47□□□□□ -0.57
NUP93-218ENST00000569322 PHRF1Q9P1Y6 1649 aaKnown RBP11.47□□□□□ -0.57
NUP93-218ENST00000569322 IQSEC2Q5JU85 1478 aa11.47□□□□□ -0.57
NUP93-218ENST00000569322 PAK3O75914 559 aaPredicted RBP11.47□□□□□ -0.57
NUP93-218ENST00000569322 HOXD11P31277 338 aaPredicted RBP11.47□□□□□ -0.57
NUP93-218ENST00000569322 NLRP6P59044 892 aa11.47□□□□□ -0.57
NUP93-218ENST00000569322 ABTB2Q8N961 1025 aa11.47□□□□□ -0.57
NUP93-218ENST00000569322 RUNDC1Q96C34 613 aa11.47□□□□□ -0.57
NUP93-218ENST00000569322 SLIT3O75094 1523 aa11.46□□□□□ -0.57
NUP93-218ENST00000569322 SBNO1A3KN83 1393 aa11.46□□□□□ -0.57
NUP93-218ENST00000569322 RTL1A6NKG5 1358 aa11.46□□□□□ -0.57
NUP93-218ENST00000569322 FLT4P35916 1363 aa11.46□□□□□ -0.57
NUP93-218ENST00000569322 NPHP3Q7Z494 1330 aa11.46□□□□□ -0.57
NUP93-218ENST00000569322 U2AF1L5P0DN76 240 aaPredicted RBP11.46□□□□□ -0.57
NUP93-218ENST00000569322 U2AF1Q01081 240 aaKnown RBP eCLIP11.46□□□□□ -0.57
NUP93-218ENST00000569322 NCBP3Q53F19 620 aaKnown RBP11.46□□□□□ -0.57
NUP93-218ENST00000569322 RNF39Q9H2S5 420 aa11.46□□□□□ -0.57
NUP93-218ENST00000569322 EMILIN1Q9Y6C2 1016 aa11.46□□□□□ -0.57
NUP93-218ENST00000569322 U2SURPO15042 1029 aaKnown RBP11.45□□□□□ -0.58
NUP93-218ENST00000569322 PPM1GO15355 546 aaPredicted RBP11.45□□□□□ -0.58
NUP93-218ENST00000569322 FOXO3O43524 673 aa11.45□□□□□ -0.58
NUP93-218ENST00000569322 KCNH5Q8NCM2 988 aa11.45□□□□□ -0.58
NUP93-218ENST00000569322 RGPD1P0DJD0 1748 aa11.45□□□□□ -0.58
NUP93-218ENST00000569322 NFAT5O94916 1531 aa11.45□□□□□ -0.58
NUP93-218ENST00000569322 KRT28Q7Z3Y7 464 aa11.44□□□□□ -0.58
NUP93-218ENST00000569322 NHSL1Q5SYE7 1610 aa11.44□□□□□ -0.58
NUP93-218ENST00000569322 PXDNQ92626 1479 aa11.44□□□□□ -0.58
NUP93-218ENST00000569322 LTBP4Q8N2S1 1624 aa11.43□□□□□ -0.58
NUP93-218ENST00000569322 MAP3K19Q56UN5 1328 aa11.43□□□□□ -0.58
NUP93-218ENST00000569322 MAPK8IP3Q9UPT6 1336 aa11.43□□□□□ -0.58
NUP93-218ENST00000569322 MED1Q15648 1581 aaPredicted RBP11.43□□□□□ -0.58
NUP93-218ENST00000569322 NEFMP07197 916 aa11.43□□□□□ -0.58
NUP93-218ENST00000569322 RRS1Q15050 365 aaKnown RBP11.43□□□□□ -0.58
NUP93-218ENST00000569322 CCDC146Q8IYE0 955 aa11.43□□□□□ -0.58
NUP93-218ENST00000569322 TNS3Q68CZ2 1445 aa11.43□□□□□ -0.58
NUP93-218ENST00000569322 USP19O94966 1318 aa11.42□□□□□ -0.58
NUP93-218ENST00000569322 APAF1O14727 1248 aa11.42□□□□□ -0.58
NUP93-218ENST00000569322 FCHSD2O94868 740 aa11.42□□□□□ -0.58
NUP93-218ENST00000569322 IL13P35225 146 aa11.42□□□□□ -0.58
NUP93-218ENST00000569322 PPP4R3CPQ6ZMV5 832 aa11.42□□□□□ -0.58
NUP93-218ENST00000569322 ARHGEF10O15013 1369 aa11.41□□□□□ -0.58
NUP93-218ENST00000569322 ZNF521Q96K83 1311 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms