RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 VPS72Q15906 364 aa16.61■□□□□ 0.25
CHRFAM7A-206ENST00000569278 ARHGEF28Q8N1W1 1705 aaKnown RBP16.61■□□□□ 0.25
CHRFAM7A-206ENST00000569278 DHX57Q6P158 1386 aaKnown RBP16.61■□□□□ 0.25
CHRFAM7A-206ENST00000569278 LRP5O75197 1615 aa16.6■□□□□ 0.25
CHRFAM7A-206ENST00000569278 THSD7AQ9UPZ6 1657 aa16.6■□□□□ 0.25
CHRFAM7A-206ENST00000569278 DEFB132Q7Z7B7 95 aa16.6■□□□□ 0.25
CHRFAM7A-206ENST00000569278 CCDC125Q86Z20 511 aa16.6■□□□□ 0.25
CHRFAM7A-206ENST00000569278 RAB3GAP2Q9H2M9 1393 aa16.6■□□□□ 0.25
CHRFAM7A-206ENST00000569278 COL14A1Q05707 1796 aaKnown RBP16.59■□□□□ 0.25
CHRFAM7A-206ENST00000569278 ONECUT3O60422 494 aaPredicted RBP16.59■□□□□ 0.25
CHRFAM7A-206ENST00000569278 SEPT12Q8IYM1 358 aa16.59■□□□□ 0.25
CHRFAM7A-206ENST00000569278 ZRANB1Q9UGI0 708 aa16.59■□□□□ 0.25
CHRFAM7A-206ENST00000569278 ARHGEF10O15013 1369 aa16.59■□□□□ 0.25
CHRFAM7A-206ENST00000569278 FAM83GA6ND36 823 aa16.58■□□□□ 0.24
CHRFAM7A-206ENST00000569278 TNS1Q9HBL0 1735 aaKnown RBP16.58■□□□□ 0.24
CHRFAM7A-206ENST00000569278 PMFBP1Q8TBY8 1022 aa16.57■□□□□ 0.24
CHRFAM7A-206ENST00000569278 TOPAZ1Q8N9V7 1692 aa16.56■□□□□ 0.24
CHRFAM7A-206ENST00000569278 PHRF1Q9P1Y6 1649 aaKnown RBP16.56■□□□□ 0.24
CHRFAM7A-206ENST00000569278 ATP7BP35670 1465 aa16.56■□□□□ 0.24
CHRFAM7A-206ENST00000569278 PLEKHG5O94827 1062 aa16.56■□□□□ 0.24
CHRFAM7A-206ENST00000569278 TRIM26Q12899 539 aaPredicted RBP16.56■□□□□ 0.24
CHRFAM7A-206ENST00000569278 HIRIP3Q9BW71 556 aaPredicted RBP16.55■□□□□ 0.24
CHRFAM7A-206ENST00000569278 PSME1Q06323 249 aa16.54■□□□□ 0.24
CHRFAM7A-206ENST00000569278 ACIN1Q9UKV3 1341 aaKnown RBP16.53■□□□□ 0.24
CHRFAM7A-206ENST00000569278 RGPD1P0DJD0 1748 aa16.53■□□□□ 0.24
CHRFAM7A-206ENST00000569278 ITSN1Q15811 1721 aa16.53■□□□□ 0.24
CHRFAM7A-206ENST00000569278 TRAK1Q9UPV9 953 aa16.52■□□□□ 0.24
CHRFAM7A-206ENST00000569278 MINK1Q8N4C8 1332 aaPredicted RBP16.51■□□□□ 0.23
CHRFAM7A-206ENST00000569278 KRT27Q7Z3Y8 459 aa16.51■□□□□ 0.23
CHRFAM7A-206ENST00000569278 LMOD2Q6P5Q4 547 aa16.5■□□□□ 0.23
CHRFAM7A-206ENST00000569278 HAP1P54257 671 aaPredicted RBP16.49■□□□□ 0.23
CHRFAM7A-206ENST00000569278 FAM98CQ17RN3 349 aaKnown RBP16.49■□□□□ 0.23
CHRFAM7A-206ENST00000569278 NRKQ7Z2Y5 1582 aa16.49■□□□□ 0.23
CHRFAM7A-206ENST00000569278 BTG4Q9NY30 223 aa16.49■□□□□ 0.23
CHRFAM7A-206ENST00000569278 POGKQ9P215 609 aa16.49■□□□□ 0.23
CHRFAM7A-206ENST00000569278 DISP2A7MBM2 1401 aa16.48■□□□□ 0.23
CHRFAM7A-206ENST00000569278 WASLO00401 505 aaPredicted RBP16.48■□□□□ 0.23
CHRFAM7A-206ENST00000569278 SPATA31A5Q5VU36 1347 aa16.47■□□□□ 0.23
CHRFAM7A-206ENST00000569278 SPATA31A7Q8IWB4 1347 aa16.47■□□□□ 0.23
CHRFAM7A-206ENST00000569278 CCDC9Q9Y3X0 531 aaKnown RBP16.47■□□□□ 0.23
CHRFAM7A-206ENST00000569278 EIF3AQ14152 1382 aaKnown RBP16.47■□□□□ 0.23
CHRFAM7A-206ENST00000569278 LMO7Q8WWI1 1683 aa16.46■□□□□ 0.23
CHRFAM7A-206ENST00000569278 FAM182BQ5T319 152 aa16.46■□□□□ 0.23
CHRFAM7A-206ENST00000569278 GPRASP1Q5JY77 1395 aa16.46■□□□□ 0.23
CHRFAM7A-206ENST00000569278 KIAA0232Q92628 1395 aa16.44■□□□□ 0.22
CHRFAM7A-206ENST00000569278 KIAA1210Q9ULL0 1709 aa16.44■□□□□ 0.22
CHRFAM7A-206ENST00000569278 RREB1Q92766 1687 aa16.43■□□□□ 0.22
CHRFAM7A-206ENST00000569278 POLR3AO14802 1390 aaPredicted RBP16.43■□□□□ 0.22
CHRFAM7A-206ENST00000569278 PSDA5PKW4 1024 aaPredicted RBP16.43■□□□□ 0.22
CHRFAM7A-206ENST00000569278 DCAF11Q8TEB1 546 aa16.43■□□□□ 0.22
CHRFAM7A-206ENST00000569278 KDM2AQ9Y2K7 1162 aa16.43■□□□□ 0.22
CHRFAM7A-206ENST00000569278 SPATA31A1Q5TZJ5 1347 aa16.42■□□□□ 0.22
CHRFAM7A-206ENST00000569278 CAMTA1Q9Y6Y1 1673 aa16.41■□□□□ 0.22
CHRFAM7A-206ENST00000569278 HRCP23327 699 aa16.41■□□□□ 0.22
CHRFAM7A-206ENST00000569278 NUP188Q5SRE5 1749 aa16.41■□□□□ 0.22
CHRFAM7A-206ENST00000569278 EN1Q05925 392 aaPredicted RBP16.4■□□□□ 0.22
CHRFAM7A-206ENST00000569278 SF3B2Q13435 895 aaKnown RBP16.4■□□□□ 0.22
CHRFAM7A-206ENST00000569278 A0A0G2JS52 829 aa16.39■□□□□ 0.21
CHRFAM7A-206ENST00000569278 MYT1Q01538 1121 aa16.39■□□□□ 0.21
CHRFAM7A-206ENST00000569278 CHRNA2Q15822 529 aa16.39■□□□□ 0.21
CHRFAM7A-206ENST00000569278 NUDT16Q96DE0 195 aaKnown RBP16.39■□□□□ 0.21
CHRFAM7A-206ENST00000569278 PCGF6Q9BYE7 350 aa16.39■□□□□ 0.21
CHRFAM7A-206ENST00000569278 PRDM11Q9NQV5 511 aa16.39■□□□□ 0.21
CHRFAM7A-206ENST00000569278 SSH2Q76I76 1423 aa16.38■□□□□ 0.21
CHRFAM7A-206ENST00000569278 BAG6P46379 1132 aa16.38■□□□□ 0.21
CHRFAM7A-206ENST00000569278 NGDNQ8NEJ9 315 aaKnown RBP16.38■□□□□ 0.21
CHRFAM7A-206ENST00000569278 USP19O94966 1318 aa16.37■□□□□ 0.21
CHRFAM7A-206ENST00000569278 PEAK1Q9H792 1746 aa16.36■□□□□ 0.21
CHRFAM7A-206ENST00000569278 PARP4Q9UKK3 1724 aaKnown RBP16.36■□□□□ 0.21
CHRFAM7A-206ENST00000569278 PAK3O75914 559 aaPredicted RBP16.36■□□□□ 0.21
CHRFAM7A-206ENST00000569278 QRICH2Q9H0J4 1663 aa16.35■□□□□ 0.21
CHRFAM7A-206ENST00000569278 NUTM2GQ5VZR2 741 aa16.35■□□□□ 0.21
CHRFAM7A-206ENST00000569278 CDK19Q9BWU1 502 aa16.35■□□□□ 0.21
CHRFAM7A-206ENST00000569278 ACEP12821 1306 aa16.35■□□□□ 0.21
CHRFAM7A-206ENST00000569278 CPDO75976 1380 aa16.35■□□□□ 0.21
CHRFAM7A-206ENST00000569278 EZH2Q15910 746 aaKnown RBP16.34■□□□□ 0.21
CHRFAM7A-206ENST00000569278 STAC3Q96MF2 364 aa16.34■□□□□ 0.21
CHRFAM7A-206ENST00000569278 CAMKK2Q96RR4 588 aa16.34■□□□□ 0.21
CHRFAM7A-206ENST00000569278 COL5A2P05997 1499 aaPredicted RBP16.34■□□□□ 0.21
CHRFAM7A-206ENST00000569278 LRRC37A3O60309 1634 aa16.34■□□□□ 0.21
CHRFAM7A-206ENST00000569278 WNK3Q9BYP7 1800 aa16.33■□□□□ 0.21
CHRFAM7A-206ENST00000569278 PLEKHG3A1L390 1219 aa16.33■□□□□ 0.2
CHRFAM7A-206ENST00000569278 ZC3H6P61129 1189 aaKnown RBP16.33■□□□□ 0.2
CHRFAM7A-206ENST00000569278 R3HDM1Q15032 1099 aaKnown RBP16.33■□□□□ 0.2
CHRFAM7A-206ENST00000569278 NBPF1Q3BBV0 1214 aa16.33■□□□□ 0.2
CHRFAM7A-206ENST00000569278 SLIT3O75094 1523 aa16.33■□□□□ 0.2
CHRFAM7A-206ENST00000569278 PIK3C2AO00443 1686 aa16.33■□□□□ 0.2
CHRFAM7A-206ENST00000569278 COL18A1P39060 1754 aa16.32■□□□□ 0.2
CHRFAM7A-206ENST00000569278 NBPF8Q3BBV2 869 aa16.32■□□□□ 0.2
CHRFAM7A-206ENST00000569278 STRN4Q9NRL3 753 aa16.32■□□□□ 0.2
CHRFAM7A-206ENST00000569278 TRIM37O94972 964 aa16.31■□□□□ 0.2
CHRFAM7A-206ENST00000569278 LARP1Q6PKG0 1096 aaKnown RBP16.31■□□□□ 0.2
CHRFAM7A-206ENST00000569278 PPIP5K1Q6PFW1 1433 aa16.3■□□□□ 0.2
CHRFAM7A-206ENST00000569278 BARGINQ6ZT62 677 aa16.3■□□□□ 0.2
CHRFAM7A-206ENST00000569278 CCDC61Q9Y6R9 512 aa16.3■□□□□ 0.2
CHRFAM7A-206ENST00000569278 SBF2Q86WG5 1849 aa16.29■□□□□ 0.2
CHRFAM7A-206ENST00000569278 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
CHRFAM7A-206ENST00000569278 RGPD3A6NKT7 1758 aaPredicted RBP16.28■□□□□ 0.2
CHRFAM7A-206ENST00000569278 RGPD4Q7Z3J3 1758 aa16.28■□□□□ 0.2
CHRFAM7A-206ENST00000569278 PARD3Q8TEW0 1356 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms