RNA–Protein interactions for RNA: ENST00000569204.1

EPB42-208, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 3

Gene EPB42, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-208ENST00000569204 CCDC125Q86Z20 511 aa23.15■■□□□ 1.3
EPB42-208ENST00000569204 CCDC9Q9Y3X0 531 aaKnown RBP23.15■■□□□ 1.3
EPB42-208ENST00000569204 SEPT12Q8IYM1 358 aa23.13■■□□□ 1.29
EPB42-208ENST00000569204 ONECUT3O60422 494 aaPredicted RBP23.12■■□□□ 1.29
EPB42-208ENST00000569204 BTG4Q9NY30 223 aa23.11■■□□□ 1.29
EPB42-208ENST00000569204 CCDC61Q9Y6R9 512 aa23.11■■□□□ 1.29
EPB42-208ENST00000569204 POLR3AO14802 1390 aaPredicted RBP23.09■■□□□ 1.29
EPB42-208ENST00000569204 ACEP12821 1306 aa23.08■■□□□ 1.29
EPB42-208ENST00000569204 PHRF1Q9P1Y6 1649 aaKnown RBP23.08■■□□□ 1.29
EPB42-208ENST00000569204 EP400Q96L91 3159 aa23.08■■□□□ 1.29
EPB42-208ENST00000569204 PLEKHG3A1L390 1219 aa23.07■■□□□ 1.28
EPB42-208ENST00000569204 NBPF8Q3BBV2 869 aa23.07■■□□□ 1.28
EPB42-208ENST00000569204 L3MBTL2Q969R5 705 aa23.07■■□□□ 1.28
EPB42-208ENST00000569204 BLMP54132 1417 aaPredicted RBP23.07■■□□□ 1.28
EPB42-208ENST00000569204 CENPJQ9HC77 1338 aaPredicted RBP23.07■■□□□ 1.28
EPB42-208ENST00000569204 QRICH2Q9H0J4 1663 aa23.06■■□□□ 1.28
EPB42-208ENST00000569204 PRDM11Q9NQV5 511 aa23.05■■□□□ 1.28
EPB42-208ENST00000569204 KRT27Q7Z3Y8 459 aa23.04■■□□□ 1.28
EPB42-208ENST00000569204 SIN3AQ96ST3 1273 aa23.04■■□□□ 1.28
EPB42-208ENST00000569204 SRPK2P78362 688 aaKnown RBP23.03■■□□□ 1.28
EPB42-208ENST00000569204 FAM98CQ17RN3 349 aaKnown RBP23.03■■□□□ 1.28
EPB42-208ENST00000569204 TRPM1Q7Z4N2 1603 aa23.03■■□□□ 1.28
EPB42-208ENST00000569204 KIAA0232Q92628 1395 aa23.02■■□□□ 1.28
EPB42-208ENST00000569204 A0A0G2JS52 829 aa23.02■■□□□ 1.28
EPB42-208ENST00000569204 MYT1Q01538 1121 aa23.02■■□□□ 1.28
EPB42-208ENST00000569204 NUTM2GQ5VZR2 741 aa23.02■■□□□ 1.28
EPB42-208ENST00000569204 ZRANB1Q9UGI0 708 aa23.02■■□□□ 1.28
EPB42-208ENST00000569204 SPATA31A5Q5VU36 1347 aa23.02■■□□□ 1.28
EPB42-208ENST00000569204 SPATA31A7Q8IWB4 1347 aa23.02■■□□□ 1.28
EPB42-208ENST00000569204 PPIP5K1Q6PFW1 1433 aa23.01■■□□□ 1.27
EPB42-208ENST00000569204 CABP2Q9NPB3 220 aa23■■□□□ 1.27
EPB42-208ENST00000569204 SF3B2Q13435 895 aaKnown RBP22.99■■□□□ 1.27
EPB42-208ENST00000569204 ZC3H6P61129 1189 aaKnown RBP22.98■■□□□ 1.27
EPB42-208ENST00000569204 NEUROD1Q13562 356 aa22.98■■□□□ 1.27
EPB42-208ENST00000569204 CHRNA2Q15822 529 aa22.98■■□□□ 1.27
EPB42-208ENST00000569204 ABTB2Q8N961 1025 aa22.98■■□□□ 1.27
EPB42-208ENST00000569204 NRKQ7Z2Y5 1582 aa22.97■■□□□ 1.27
EPB42-208ENST00000569204 THSD7AQ9UPZ6 1657 aa22.97■■□□□ 1.27
EPB42-208ENST00000569204 DEFB132Q7Z7B7 95 aa22.97■■□□□ 1.27
EPB42-208ENST00000569204 BRD4O60885 1362 aaPredicted RBP22.94■■□□□ 1.26
EPB42-208ENST00000569204 USP19O94966 1318 aa22.94■■□□□ 1.26
EPB42-208ENST00000569204 SPATA31A1Q5TZJ5 1347 aa22.94■■□□□ 1.26
EPB42-208ENST00000569204 ROCK2O75116 1388 aaKnown RBP22.93■■□□□ 1.26
EPB42-208ENST00000569204 STRN4Q9NRL3 753 aa22.93■■□□□ 1.26
EPB42-208ENST00000569204 NLRP13Q86W25 1043 aa22.92■■□□□ 1.26
EPB42-208ENST00000569204 CABP1Q9NZU7 370 aa22.92■■□□□ 1.26
EPB42-208ENST00000569204 CPDO75976 1380 aa22.91■■□□□ 1.26
EPB42-208ENST00000569204 LMO7Q8WWI1 1683 aa22.91■■□□□ 1.26
EPB42-208ENST00000569204 EVC2Q86UK5 1308 aa22.91■■□□□ 1.26
EPB42-208ENST00000569204 RGPD1P0DJD0 1748 aa22.91■■□□□ 1.26
EPB42-208ENST00000569204 USP6P35125 1406 aa22.91■■□□□ 1.26
EPB42-208ENST00000569204 CAMTA1Q9Y6Y1 1673 aa22.9■■□□□ 1.26
EPB42-208ENST00000569204 SSH2Q76I76 1423 aa22.9■■□□□ 1.26
EPB42-208ENST00000569204 GCP02774 474 aa22.89■■□□□ 1.25
EPB42-208ENST00000569204 EVA1CP58658 441 aa22.89■■□□□ 1.25
EPB42-208ENST00000569204 FAM182BQ5T319 152 aa22.88■■□□□ 1.25
EPB42-208ENST00000569204 BAG6P46379 1132 aa22.87■■□□□ 1.25
EPB42-208ENST00000569204 USP35Q9P2H5 1018 aa22.86■■□□□ 1.25
EPB42-208ENST00000569204 AKAP12Q02952 1782 aa22.86■■□□□ 1.25
EPB42-208ENST00000569204 PIK3C2AO00443 1686 aa22.85■■□□□ 1.25
EPB42-208ENST00000569204 SLIT3O75094 1523 aa22.84■■□□□ 1.25
EPB42-208ENST00000569204 NLRP6P59044 892 aa22.84■■□□□ 1.25
EPB42-208ENST00000569204 LARP1Q6PKG0 1096 aaKnown RBP22.84■■□□□ 1.25
EPB42-208ENST00000569204 BARGINQ6ZT62 677 aa22.84■■□□□ 1.25
EPB42-208ENST00000569204 TNS1Q9HBL0 1735 aaKnown RBP22.84■■□□□ 1.25
EPB42-208ENST00000569204 COL5A2P05997 1499 aaPredicted RBP22.81■■□□□ 1.24
EPB42-208ENST00000569204 TRIM26Q12899 539 aaPredicted RBP22.81■■□□□ 1.24
EPB42-208ENST00000569204 TCP11L2Q8N4U5 519 aa22.81■■□□□ 1.24
EPB42-208ENST00000569204 ZNF692Q9BU19 519 aaPredicted RBP22.81■■□□□ 1.24
EPB42-208ENST00000569204 EN1Q05925 392 aaPredicted RBP22.8■■□□□ 1.24
EPB42-208ENST00000569204 FAM196AQ6ZSG2 479 aa22.8■■□□□ 1.24
EPB42-208ENST00000569204 DISP2A7MBM2 1401 aa22.79■■□□□ 1.24
EPB42-208ENST00000569204 TTC21BQ7Z4L5 1316 aa22.79■■□□□ 1.24
EPB42-208ENST00000569204 ZBTB7CA1YPR0 619 aa22.78■■□□□ 1.24
EPB42-208ENST00000569204 PDE3BQ13370 1112 aa22.78■■□□□ 1.24
EPB42-208ENST00000569204 THRAP3Q9Y2W1 955 aaKnown RBP22.78■■□□□ 1.24
EPB42-208ENST00000569204 COL18A1P39060 1754 aa22.78■■□□□ 1.24
EPB42-208ENST00000569204 AATKQ6ZMQ8 1374 aa22.77■■□□□ 1.24
EPB42-208ENST00000569204 SBNO2Q9Y2G9 1366 aa22.77■■□□□ 1.24
EPB42-208ENST00000569204 PARP4Q9UKK3 1724 aaKnown RBP22.77■■□□□ 1.24
EPB42-208ENST00000569204 CARD11Q9BXL7 1154 aa22.77■■□□□ 1.24
EPB42-208ENST00000569204 CRB1P82279 1406 aa22.76■■□□□ 1.23
EPB42-208ENST00000569204 CPSF1Q10570 1443 aaKnown RBP22.76■■□□□ 1.23
EPB42-208ENST00000569204 MON2Q7Z3U7 1717 aa22.76■■□□□ 1.23
EPB42-208ENST00000569204 TONSLQ96HA7 1378 aa22.76■■□□□ 1.23
EPB42-208ENST00000569204 TRIM37O94972 964 aa22.75■■□□□ 1.23
EPB42-208ENST00000569204 TTC21AQ8NDW8 1320 aa22.75■■□□□ 1.23
EPB42-208ENST00000569204 RGPD5Q99666 1765 aa22.73■■□□□ 1.23
EPB42-208ENST00000569204 KTN1Q86UP2 1357 aaKnown RBP22.73■■□□□ 1.23
EPB42-208ENST00000569204 PSDA5PKW4 1024 aaPredicted RBP22.72■■□□□ 1.23
EPB42-208ENST00000569204 KCNH5Q8NCM2 988 aa22.72■■□□□ 1.23
EPB42-208ENST00000569204 SRCAPQ6ZRS2 3230 aa22.71■■□□□ 1.23
EPB42-208ENST00000569204 EZH2Q15910 746 aaKnown RBP22.71■■□□□ 1.23
EPB42-208ENST00000569204 LRP5O75197 1615 aa22.71■■□□□ 1.23
EPB42-208ENST00000569204 ARHGEF25Q86VW2 580 aa22.7■■□□□ 1.22
EPB42-208ENST00000569204 AXIN2Q9Y2T1 843 aa22.7■■□□□ 1.22
EPB42-208ENST00000569204 WNK3Q9BYP7 1800 aa22.7■■□□□ 1.22
EPB42-208ENST00000569204 APBA3O96018 575 aa22.69■■□□□ 1.22
EPB42-208ENST00000569204 TOM1L2Q6ZVM7 507 aa22.69■■□□□ 1.22
EPB42-208ENST00000569204 CAMKK2Q96RR4 588 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms