RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 SIN3AQ96ST3 1273 aa23.85■■□□□ 1.41
CDR2-207ENST00000569045 CCDC125Q86Z20 511 aa23.83■■□□□ 1.41
CDR2-207ENST00000569045 ACEP12821 1306 aa23.83■■□□□ 1.4
CDR2-207ENST00000569045 GLI3P10071 1580 aa23.82■■□□□ 1.4
CDR2-207ENST00000569045 BTG4Q9NY30 223 aa23.82■■□□□ 1.4
CDR2-207ENST00000569045 POLR3AO14802 1390 aaPredicted RBP23.81■■□□□ 1.4
CDR2-207ENST00000569045 PLEKHG3A1L390 1219 aa23.81■■□□□ 1.4
CDR2-207ENST00000569045 NBPF8Q3BBV2 869 aa23.81■■□□□ 1.4
CDR2-207ENST00000569045 PRDM11Q9NQV5 511 aa23.8■■□□□ 1.4
CDR2-207ENST00000569045 COL14A1Q05707 1796 aaKnown RBP23.8■■□□□ 1.4
CDR2-207ENST00000569045 SEPT12Q8IYM1 358 aa23.79■■□□□ 1.4
CDR2-207ENST00000569045 TOPAZ1Q8N9V7 1692 aa23.79■■□□□ 1.4
CDR2-207ENST00000569045 A0A0G2JS52 829 aa23.78■■□□□ 1.4
CDR2-207ENST00000569045 MYT1Q01538 1121 aa23.78■■□□□ 1.4
CDR2-207ENST00000569045 ROCK2O75116 1388 aaKnown RBP23.78■■□□□ 1.4
CDR2-207ENST00000569045 QRICH2Q9H0J4 1663 aa23.77■■□□□ 1.4
CDR2-207ENST00000569045 CABP2Q9NPB3 220 aa23.77■■□□□ 1.4
CDR2-207ENST00000569045 EP400Q96L91 3159 aa23.77■■□□□ 1.4
CDR2-207ENST00000569045 PPIP5K1Q6PFW1 1433 aa23.76■■□□□ 1.39
CDR2-207ENST00000569045 ABTB2Q8N961 1025 aa23.76■■□□□ 1.39
CDR2-207ENST00000569045 TRPM1Q7Z4N2 1603 aa23.75■■□□□ 1.39
CDR2-207ENST00000569045 ONECUT3O60422 494 aaPredicted RBP23.75■■□□□ 1.39
CDR2-207ENST00000569045 EVC2Q86UK5 1308 aa23.75■■□□□ 1.39
CDR2-207ENST00000569045 NUTM2GQ5VZR2 741 aa23.74■■□□□ 1.39
CDR2-207ENST00000569045 CRYBG1Q9Y4K1 1723 aa23.73■■□□□ 1.39
CDR2-207ENST00000569045 SF3B2Q13435 895 aaKnown RBP23.72■■□□□ 1.39
CDR2-207ENST00000569045 KRT27Q7Z3Y8 459 aa23.72■■□□□ 1.39
CDR2-207ENST00000569045 BRD4O60885 1362 aaPredicted RBP23.72■■□□□ 1.39
CDR2-207ENST00000569045 KIAA0232Q92628 1395 aa23.72■■□□□ 1.39
CDR2-207ENST00000569045 NRAPQ86VF7 1730 aa23.72■■□□□ 1.39
CDR2-207ENST00000569045 FAM98CQ17RN3 349 aaKnown RBP23.71■■□□□ 1.39
CDR2-207ENST00000569045 ZC3H6P61129 1189 aaKnown RBP23.7■■□□□ 1.38
CDR2-207ENST00000569045 NLRP13Q86W25 1043 aa23.7■■□□□ 1.38
CDR2-207ENST00000569045 BRWD3Q6RI45 1802 aa23.7■■□□□ 1.38
CDR2-207ENST00000569045 PHRF1Q9P1Y6 1649 aaKnown RBP23.7■■□□□ 1.38
CDR2-207ENST00000569045 BLMP54132 1417 aaPredicted RBP23.69■■□□□ 1.38
CDR2-207ENST00000569045 CABP1Q9NZU7 370 aa23.69■■□□□ 1.38
CDR2-207ENST00000569045 SPATA31A5Q5VU36 1347 aa23.68■■□□□ 1.38
CDR2-207ENST00000569045 SPATA31A7Q8IWB4 1347 aa23.68■■□□□ 1.38
CDR2-207ENST00000569045 CHRNA2Q15822 529 aa23.68■■□□□ 1.38
CDR2-207ENST00000569045 TONSLQ96HA7 1378 aa23.67■■□□□ 1.38
CDR2-207ENST00000569045 EVA1CP58658 441 aa23.67■■□□□ 1.38
CDR2-207ENST00000569045 STRN4Q9NRL3 753 aa23.67■■□□□ 1.38
CDR2-207ENST00000569045 ZRANB1Q9UGI0 708 aa23.67■■□□□ 1.38
CDR2-207ENST00000569045 TRIM26Q12899 539 aaPredicted RBP23.66■■□□□ 1.38
CDR2-207ENST00000569045 USP19O94966 1318 aa23.64■■□□□ 1.38
CDR2-207ENST00000569045 USP6P35125 1406 aa23.63■■□□□ 1.37
CDR2-207ENST00000569045 CARD11Q9BXL7 1154 aa23.63■■□□□ 1.37
CDR2-207ENST00000569045 CPDO75976 1380 aa23.63■■□□□ 1.37
CDR2-207ENST00000569045 GCP02774 474 aa23.62■■□□□ 1.37
CDR2-207ENST00000569045 NLRP6P59044 892 aa23.62■■□□□ 1.37
CDR2-207ENST00000569045 ZNF692Q9BU19 519 aaPredicted RBP23.62■■□□□ 1.37
CDR2-207ENST00000569045 SPATA31A1Q5TZJ5 1347 aa23.61■■□□□ 1.37
CDR2-207ENST00000569045 NRKQ7Z2Y5 1582 aa23.61■■□□□ 1.37
CDR2-207ENST00000569045 ZBTB7CA1YPR0 619 aa23.57■■□□□ 1.36
CDR2-207ENST00000569045 USP35Q9P2H5 1018 aa23.57■■□□□ 1.36
CDR2-207ENST00000569045 SSH2Q76I76 1423 aa23.57■■□□□ 1.36
CDR2-207ENST00000569045 SBNO2Q9Y2G9 1366 aa23.56■■□□□ 1.36
CDR2-207ENST00000569045 BAG6P46379 1132 aa23.56■■□□□ 1.36
CDR2-207ENST00000569045 DEFB132Q7Z7B7 95 aa23.55■■□□□ 1.36
CDR2-207ENST00000569045 THSD7AQ9UPZ6 1657 aa23.54■■□□□ 1.36
CDR2-207ENST00000569045 CAMTA1Q9Y6Y1 1673 aa23.54■■□□□ 1.36
CDR2-207ENST00000569045 LARP1Q6PKG0 1096 aaKnown RBP23.53■■□□□ 1.36
CDR2-207ENST00000569045 BARGINQ6ZT62 677 aa23.53■■□□□ 1.36
CDR2-207ENST00000569045 TCP11L2Q8N4U5 519 aa23.53■■□□□ 1.36
CDR2-207ENST00000569045 TTC21BQ7Z4L5 1316 aa23.53■■□□□ 1.36
CDR2-207ENST00000569045 TTC21AQ8NDW8 1320 aa23.53■■□□□ 1.36
CDR2-207ENST00000569045 PDE3BQ13370 1112 aa23.52■■□□□ 1.36
CDR2-207ENST00000569045 KCNH5Q8NCM2 988 aa23.52■■□□□ 1.36
CDR2-207ENST00000569045 THRAP3Q9Y2W1 955 aaKnown RBP23.52■■□□□ 1.36
CDR2-207ENST00000569045 KTN1Q86UP2 1357 aaKnown RBP23.52■■□□□ 1.36
CDR2-207ENST00000569045 LMO7Q8WWI1 1683 aa23.51■■□□□ 1.35
CDR2-207ENST00000569045 SLIT3O75094 1523 aa23.5■■□□□ 1.35
CDR2-207ENST00000569045 FAM182BQ5T319 152 aa23.5■■□□□ 1.35
CDR2-207ENST00000569045 FAM196AQ6ZSG2 479 aa23.5■■□□□ 1.35
CDR2-207ENST00000569045 AATKQ6ZMQ8 1374 aa23.5■■□□□ 1.35
CDR2-207ENST00000569045 AKAP12Q02952 1782 aa23.5■■□□□ 1.35
CDR2-207ENST00000569045 PIK3C2AO00443 1686 aa23.49■■□□□ 1.35
CDR2-207ENST00000569045 TMC1Q8TDI8 760 aa23.49■■□□□ 1.35
CDR2-207ENST00000569045 SLC24A1O60721 1099 aa23.48■■□□□ 1.35
CDR2-207ENST00000569045 CPSF1Q10570 1443 aaKnown RBP23.48■■□□□ 1.35
CDR2-207ENST00000569045 COL5A2P05997 1499 aaPredicted RBP23.48■■□□□ 1.35
CDR2-207ENST00000569045 RGPD1P0DJD0 1748 aa23.47■■□□□ 1.35
CDR2-207ENST00000569045 HDGFL2Q7Z4V5 671 aaPredicted RBP23.47■■□□□ 1.35
CDR2-207ENST00000569045 CRB1P82279 1406 aa23.46■■□□□ 1.35
CDR2-207ENST00000569045 SRCAPQ6ZRS2 3230 aa23.44■■□□□ 1.34
CDR2-207ENST00000569045 SOX12O15370 315 aa23.44■■□□□ 1.34
CDR2-207ENST00000569045 TOM1L2Q6ZVM7 507 aa23.44■■□□□ 1.34
CDR2-207ENST00000569045 TERF2IPQ9NYB0 399 aa23.44■■□□□ 1.34
CDR2-207ENST00000569045 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.43■■□□□ 1.34
CDR2-207ENST00000569045 PUS7Q96PZ0 661 aaKnown RBP23.43■■□□□ 1.34
CDR2-207ENST00000569045 C11orf95C9JLR9 678 aaPredicted RBP23.42■■□□□ 1.34
CDR2-207ENST00000569045 ARHGEF25Q86VW2 580 aa23.42■■□□□ 1.34
CDR2-207ENST00000569045 TRIM37O94972 964 aa23.41■■□□□ 1.34
CDR2-207ENST00000569045 EN1Q05925 392 aaPredicted RBP23.41■■□□□ 1.34
CDR2-207ENST00000569045 MON2Q7Z3U7 1717 aa23.41■■□□□ 1.34
CDR2-207ENST00000569045 CSB-PGBD3P0DP91 1061 aa23.4■■□□□ 1.34
CDR2-207ENST00000569045 WDR17Q8IZU2 1322 aa23.39■■□□□ 1.34
CDR2-207ENST00000569045 SLC12A5Q9H2X9 1139 aa23.39■■□□□ 1.33
CDR2-207ENST00000569045 ST20-MTHFSA0A0A6YYL1 179 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms