RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 COL14A1Q05707 1796 aaKnown RBP22.02■■□□□ 1.12
USB1-214ENST00000568848 PAK3O75914 559 aaPredicted RBP22.01■■□□□ 1.11
USB1-214ENST00000568848 CHRNA2Q15822 529 aa22.01■■□□□ 1.11
USB1-214ENST00000568848 NUTM2GQ5VZR2 741 aa22.01■■□□□ 1.11
USB1-214ENST00000568848 HRCP23327 699 aa22■■□□□ 1.11
USB1-214ENST00000568848 TULP4Q9NRJ4 1543 aa22■■□□□ 1.11
USB1-214ENST00000568848 RAB3GAP2Q9H2M9 1393 aa21.99■■□□□ 1.11
USB1-214ENST00000568848 BAG6P46379 1132 aa21.99■■□□□ 1.11
USB1-214ENST00000568848 R3HDM1Q15032 1099 aaKnown RBP21.99■■□□□ 1.11
USB1-214ENST00000568848 TNS1Q9HBL0 1735 aaKnown RBP21.99■■□□□ 1.11
USB1-214ENST00000568848 SPATA31A5Q5VU36 1347 aa21.99■■□□□ 1.11
USB1-214ENST00000568848 SPATA31A7Q8IWB4 1347 aa21.99■■□□□ 1.11
USB1-214ENST00000568848 THSD7AQ9UPZ6 1657 aa21.98■■□□□ 1.11
USB1-214ENST00000568848 GPRASP1Q5JY77 1395 aa21.98■■□□□ 1.11
USB1-214ENST00000568848 WASLO00401 505 aaPredicted RBP21.97■■□□□ 1.11
USB1-214ENST00000568848 NGDNQ8NEJ9 315 aaKnown RBP21.97■■□□□ 1.11
USB1-214ENST00000568848 RGPD1P0DJD0 1748 aa21.97■■□□□ 1.11
USB1-214ENST00000568848 EZH2Q15910 746 aaKnown RBP21.96■■□□□ 1.11
USB1-214ENST00000568848 DCAF11Q8TEB1 546 aa21.96■■□□□ 1.11
USB1-214ENST00000568848 PRDM11Q9NQV5 511 aa21.96■■□□□ 1.11
USB1-214ENST00000568848 STRN4Q9NRL3 753 aa21.95■■□□□ 1.1
USB1-214ENST00000568848 KIAA0232Q92628 1395 aa21.95■■□□□ 1.1
USB1-214ENST00000568848 ZC3H6P61129 1189 aaKnown RBP21.94■■□□□ 1.1
USB1-214ENST00000568848 PHRF1Q9P1Y6 1649 aaKnown RBP21.94■■□□□ 1.1
USB1-214ENST00000568848 ARHGEF28Q8N1W1 1705 aaKnown RBP21.94■■□□□ 1.1
USB1-214ENST00000568848 ATP7BP35670 1465 aa21.93■■□□□ 1.1
USB1-214ENST00000568848 USP35Q9P2H5 1018 aa21.93■■□□□ 1.1
USB1-214ENST00000568848 TRIM37O94972 964 aa21.92■■□□□ 1.1
USB1-214ENST00000568848 SPATA31A1Q5TZJ5 1347 aa21.9■■□□□ 1.1
USB1-214ENST00000568848 NUDT16Q96DE0 195 aaKnown RBP21.9■■□□□ 1.1
USB1-214ENST00000568848 ITSN1Q15811 1721 aa21.86■■□□□ 1.09
USB1-214ENST00000568848 EIF3AQ14152 1382 aaKnown RBP21.86■■□□□ 1.09
USB1-214ENST00000568848 CAMKK2Q96RR4 588 aa21.85■■□□□ 1.09
USB1-214ENST00000568848 CDK19Q9BWU1 502 aa21.85■■□□□ 1.09
USB1-214ENST00000568848 NRKQ7Z2Y5 1582 aa21.84■■□□□ 1.09
USB1-214ENST00000568848 TOPAZ1Q8N9V7 1692 aa21.84■■□□□ 1.09
USB1-214ENST00000568848 DISP2A7MBM2 1401 aa21.83■■□□□ 1.09
USB1-214ENST00000568848 CAMTA1Q9Y6Y1 1673 aa21.83■■□□□ 1.09
USB1-214ENST00000568848 APBA3O96018 575 aa21.83■■□□□ 1.09
USB1-214ENST00000568848 LARP1Q6PKG0 1096 aaKnown RBP21.83■■□□□ 1.09
USB1-214ENST00000568848 ACEP12821 1306 aa21.82■■□□□ 1.08
USB1-214ENST00000568848 SSH2Q76I76 1423 aa21.81■■□□□ 1.08
USB1-214ENST00000568848 NUP188Q5SRE5 1749 aa21.8■■□□□ 1.08
USB1-214ENST00000568848 ZBTB7CA1YPR0 619 aa21.79■■□□□ 1.08
USB1-214ENST00000568848 NBPF8Q3BBV2 869 aa21.79■■□□□ 1.08
USB1-214ENST00000568848 RREB1Q92766 1687 aa21.79■■□□□ 1.08
USB1-214ENST00000568848 EVA1CP58658 441 aa21.78■■□□□ 1.08
USB1-214ENST00000568848 NBPF1Q3BBV0 1214 aa21.78■■□□□ 1.08
USB1-214ENST00000568848 LMO7Q8WWI1 1683 aa21.78■■□□□ 1.08
USB1-214ENST00000568848 FAM196AQ6ZSG2 479 aa21.77■■□□□ 1.08
USB1-214ENST00000568848 POLR3AO14802 1390 aaPredicted RBP21.76■■□□□ 1.07
USB1-214ENST00000568848 ABTB2Q8N961 1025 aa21.76■■□□□ 1.07
USB1-214ENST00000568848 PDE3BQ13370 1112 aa21.74■■□□□ 1.07
USB1-214ENST00000568848 CABP2Q9NPB3 220 aa21.74■■□□□ 1.07
USB1-214ENST00000568848 PTF1AQ7RTS3 328 aa21.73■■□□□ 1.07
USB1-214ENST00000568848 BARGINQ6ZT62 677 aa21.71■■□□□ 1.07
USB1-214ENST00000568848 TCP11L2Q8N4U5 519 aa21.71■■□□□ 1.07
USB1-214ENST00000568848 CCDC61Q9Y6R9 512 aa21.71■■□□□ 1.07
USB1-214ENST00000568848 USP19O94966 1318 aa21.71■■□□□ 1.07
USB1-214ENST00000568848 PPIP5K1Q6PFW1 1433 aa21.71■■□□□ 1.07
USB1-214ENST00000568848 PLEKHG3A1L390 1219 aa21.7■■□□□ 1.06
USB1-214ENST00000568848 COL5A2P05997 1499 aaPredicted RBP21.7■■□□□ 1.06
USB1-214ENST00000568848 SRPK2P78362 688 aaKnown RBP21.69■■□□□ 1.06
USB1-214ENST00000568848 CPDO75976 1380 aa21.67■■□□□ 1.06
USB1-214ENST00000568848 GCP02774 474 aa21.67■■□□□ 1.06
USB1-214ENST00000568848 PARP4Q9UKK3 1724 aaKnown RBP21.66■■□□□ 1.06
USB1-214ENST00000568848 LRRC37A3O60309 1634 aa21.66■■□□□ 1.06
USB1-214ENST00000568848 PDGFDQ9GZP0 370 aaPredicted RBP21.66■■□□□ 1.06
USB1-214ENST00000568848 PEAK1Q9H792 1746 aa21.66■■□□□ 1.06
USB1-214ENST00000568848 QRICH2Q9H0J4 1663 aa21.65■■□□□ 1.06
USB1-214ENST00000568848 ANO8Q9HCE9 1232 aaPredicted RBP21.64■■□□□ 1.05
USB1-214ENST00000568848 KIAA1210Q9ULL0 1709 aa21.63■■□□□ 1.05
USB1-214ENST00000568848 PARD3Q8TEW0 1356 aa21.63■■□□□ 1.05
USB1-214ENST00000568848 SOX12O15370 315 aa21.62■■□□□ 1.05
USB1-214ENST00000568848 NLRP13Q86W25 1043 aa21.62■■□□□ 1.05
USB1-214ENST00000568848 CABP1Q9NZU7 370 aa21.62■■□□□ 1.05
USB1-214ENST00000568848 PIK3C2AO00443 1686 aa21.62■■□□□ 1.05
USB1-214ENST00000568848 SBF2Q86WG5 1849 aa21.62■■□□□ 1.05
USB1-214ENST00000568848 CENPJQ9HC77 1338 aaPredicted RBP21.61■■□□□ 1.05
USB1-214ENST00000568848 CRB1P82279 1406 aa21.61■■□□□ 1.05
USB1-214ENST00000568848 YY1P25490 414 aa21.6■■□□□ 1.05
USB1-214ENST00000568848 NLRP6P59044 892 aa21.6■■□□□ 1.05
USB1-214ENST00000568848 NBPF14Q5TI25 921 aa21.6■■□□□ 1.05
USB1-214ENST00000568848 AXIN2Q9Y2T1 843 aa21.6■■□□□ 1.05
USB1-214ENST00000568848 COL18A1P39060 1754 aa21.6■■□□□ 1.05
USB1-214ENST00000568848 RGPD5Q99666 1765 aa21.6■■□□□ 1.05
USB1-214ENST00000568848 SLIT3O75094 1523 aa21.6■■□□□ 1.05
USB1-214ENST00000568848 USP6P35125 1406 aa21.59■■□□□ 1.05
USB1-214ENST00000568848 STAC3Q96MF2 364 aa21.59■■□□□ 1.05
USB1-214ENST00000568848 WNK3Q9BYP7 1800 aa21.59■■□□□ 1.05
USB1-214ENST00000568848 TOM1L2Q6ZVM7 507 aa21.58■■□□□ 1.05
USB1-214ENST00000568848 PPP1R1BQ9UD71 204 aaPredicted RBP21.58■■□□□ 1.05
USB1-214ENST00000568848 OVOS2A0A0G2JMS6 1433 aa21.57■■□□□ 1.04
USB1-214ENST00000568848 OVOS2A0A0J9YW53 1432 aa21.57■■□□□ 1.04
USB1-214ENST00000568848 OVOS2Q6IE36 1432 aa21.57■■□□□ 1.04
USB1-214ENST00000568848 KCNQ2O43526 872 aa21.56■■□□□ 1.04
USB1-214ENST00000568848 MARCH10Q8NA82 808 aaPredicted RBP21.56■■□□□ 1.04
USB1-214ENST00000568848 SPON1Q9HCB6 807 aa21.56■■□□□ 1.04
USB1-214ENST00000568848 THRAP3Q9Y2W1 955 aaKnown RBP21.56■■□□□ 1.04
USB1-214ENST00000568848 CASZ1Q86V15 1759 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms