RNA–Protein interactions for RNA: ENST00000568799.1

GGA2-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 1,403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-212ENST00000568799 TOPAZ1Q8N9V7 1692 aa30.05■■■□□ 2.4
GGA2-212ENST00000568799 PPIP5K1Q6PFW1 1433 aa30.04■■■□□ 2.4
GGA2-212ENST00000568799 ALS2Q96Q42 1657 aa30.04■■■□□ 2.4
GGA2-212ENST00000568799 GJD4Q96KN9 370 aaPredicted RBP30.04■■■□□ 2.4
GGA2-212ENST00000568799 CARD11Q9BXL7 1154 aa30.04■■■□□ 2.4
GGA2-212ENST00000568799 ABCA3Q99758 1704 aa30.02■■■□□ 2.4
GGA2-212ENST00000568799 TNKS1BP1Q9C0C2 1729 aaKnown RBP30■■■□□ 2.39
GGA2-212ENST00000568799 UPF1Q92900 1129 aaKnown RBP eCLIP29.99■■■□□ 2.39
GGA2-212ENST00000568799 FAM83GA6ND36 823 aa29.98■■■□□ 2.39
GGA2-212ENST00000568799 PCGF6Q9BYE7 350 aa29.98■■■□□ 2.39
GGA2-212ENST00000568799 CCDC9Q9Y3X0 531 aaKnown RBP29.98■■■□□ 2.39
GGA2-212ENST00000568799 CABP1Q9NZU7 370 aa29.97■■■□□ 2.39
GGA2-212ENST00000568799 ABTB2Q8N961 1025 aa29.96■■■□□ 2.39
GGA2-212ENST00000568799 RALGAPBQ86X10 1494 aa29.96■■■□□ 2.39
GGA2-212ENST00000568799 VPS72Q15906 364 aa29.95■■■□□ 2.38
GGA2-212ENST00000568799 NUTM2GQ5VZR2 741 aa29.95■■■□□ 2.38
GGA2-212ENST00000568799 PLCH1Q4KWH8 1693 aa29.94■■■□□ 2.38
GGA2-212ENST00000568799 NWD2Q9ULI1 1742 aa29.94■■■□□ 2.38
GGA2-212ENST00000568799 PRDM11Q9NQV5 511 aa29.94■■■□□ 2.38
GGA2-212ENST00000568799 ATAD2Q6PL18 1390 aa29.93■■■□□ 2.38
GGA2-212ENST00000568799 BTG4Q9NY30 223 aa29.93■■■□□ 2.38
GGA2-212ENST00000568799 BRD4O60885 1362 aaPredicted RBP29.93■■■□□ 2.38
GGA2-212ENST00000568799 COL14A1Q05707 1796 aaKnown RBP29.89■■■□□ 2.38
GGA2-212ENST00000568799 SBNO2Q9Y2G9 1366 aa29.88■■■□□ 2.37
GGA2-212ENST00000568799 NLRP13Q86W25 1043 aa29.88■■■□□ 2.37
GGA2-212ENST00000568799 KIAA0232Q92628 1395 aa29.87■■■□□ 2.37
GGA2-212ENST00000568799 GLI3P10071 1580 aa29.86■■■□□ 2.37
GGA2-212ENST00000568799 USP6P35125 1406 aa29.86■■■□□ 2.37
GGA2-212ENST00000568799 CRYBG1Q9Y4K1 1723 aa29.86■■■□□ 2.37
GGA2-212ENST00000568799 ZC3H6P61129 1189 aaKnown RBP29.86■■■□□ 2.37
GGA2-212ENST00000568799 ZNF692Q9BU19 519 aaPredicted RBP29.85■■■□□ 2.37
GGA2-212ENST00000568799 PHRF1Q9P1Y6 1649 aaKnown RBP29.83■■■□□ 2.37
GGA2-212ENST00000568799 A0A0G2JS52 829 aa29.82■■■□□ 2.36
GGA2-212ENST00000568799 MYT1Q01538 1121 aa29.82■■■□□ 2.36
GGA2-212ENST00000568799 CHRNA2Q15822 529 aa29.81■■■□□ 2.36
GGA2-212ENST00000568799 SEPT12Q8IYM1 358 aa29.81■■■□□ 2.36
GGA2-212ENST00000568799 USP19O94966 1318 aa29.81■■■□□ 2.36
GGA2-212ENST00000568799 NLRP6P59044 892 aa29.8■■■□□ 2.36
GGA2-212ENST00000568799 CLSPNQ9HAW4 1339 aa29.79■■■□□ 2.36
GGA2-212ENST00000568799 NRAPQ86VF7 1730 aa29.79■■■□□ 2.36
GGA2-212ENST00000568799 GCP02774 474 aa29.78■■■□□ 2.36
GGA2-212ENST00000568799 ONECUT3O60422 494 aaPredicted RBP29.77■■■□□ 2.36
GGA2-212ENST00000568799 SLC24A1O60721 1099 aa29.77■■■□□ 2.36
GGA2-212ENST00000568799 STRN4Q9NRL3 753 aa29.77■■■□□ 2.36
GGA2-212ENST00000568799 NRKQ7Z2Y5 1582 aa29.76■■■□□ 2.35
GGA2-212ENST00000568799 EVA1CP58658 441 aa29.76■■■□□ 2.35
GGA2-212ENST00000568799 FAM98CQ17RN3 349 aaKnown RBP29.76■■■□□ 2.35
GGA2-212ENST00000568799 TMC1Q8TDI8 760 aa29.76■■■□□ 2.35
GGA2-212ENST00000568799 TIMELESSQ9UNS1 1208 aa29.76■■■□□ 2.35
GGA2-212ENST00000568799 CPDO75976 1380 aa29.75■■■□□ 2.35
GGA2-212ENST00000568799 KTN1Q86UP2 1357 aaKnown RBP29.75■■■□□ 2.35
GGA2-212ENST00000568799 SPATA31A5Q5VU36 1347 aa29.75■■■□□ 2.35
GGA2-212ENST00000568799 SPATA31A7Q8IWB4 1347 aa29.75■■■□□ 2.35
GGA2-212ENST00000568799 SSH2Q76I76 1423 aa29.73■■■□□ 2.35
GGA2-212ENST00000568799 TTC21BQ7Z4L5 1316 aa29.73■■■□□ 2.35
GGA2-212ENST00000568799 TTC21AQ8NDW8 1320 aa29.73■■■□□ 2.35
GGA2-212ENST00000568799 ST20-MTHFSA0A0A6YYL1 179 aa29.72■■■□□ 2.35
GGA2-212ENST00000568799 CCDC125Q86Z20 511 aa29.72■■■□□ 2.35
GGA2-212ENST00000568799 CPSF1Q10570 1443 aaKnown RBP29.72■■■□□ 2.35
GGA2-212ENST00000568799 KRT27Q7Z3Y8 459 aa29.71■■■□□ 2.35
GGA2-212ENST00000568799 ZBTB7CA1YPR0 619 aa29.71■■■□□ 2.35
GGA2-212ENST00000568799 HDGFL2Q7Z4V5 671 aaPredicted RBP29.71■■■□□ 2.35
GGA2-212ENST00000568799 EP400Q96L91 3159 aa29.7■■■□□ 2.34
GGA2-212ENST00000568799 PUS7Q96PZ0 661 aaKnown RBP29.7■■■□□ 2.34
GGA2-212ENST00000568799 AKAP12Q02952 1782 aa29.68■■■□□ 2.34
GGA2-212ENST00000568799 KCNH5Q8NCM2 988 aa29.67■■■□□ 2.34
GGA2-212ENST00000568799 TERF2IPQ9NYB0 399 aa29.67■■■□□ 2.34
GGA2-212ENST00000568799 SPATA31A1Q5TZJ5 1347 aa29.67■■■□□ 2.34
GGA2-212ENST00000568799 PIK3C2AO00443 1686 aa29.66■■■□□ 2.34
GGA2-212ENST00000568799 TESK2Q96S53 571 aa29.66■■■□□ 2.34
GGA2-212ENST00000568799 SLIT3O75094 1523 aa29.65■■■□□ 2.34
GGA2-212ENST00000568799 USP47Q96K76 1375 aa29.65■■■□□ 2.34
GGA2-212ENST00000568799 CCER1Q8TC90 406 aaPredicted RBP29.65■■■□□ 2.34
GGA2-212ENST00000568799 USP35Q9P2H5 1018 aa29.65■■■□□ 2.34
GGA2-212ENST00000568799 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.64■■■□□ 2.34
GGA2-212ENST00000568799 SLC12A5Q9H2X9 1139 aa29.64■■■□□ 2.34
GGA2-212ENST00000568799 BRWD3Q6RI45 1802 aa29.64■■■□□ 2.34
GGA2-212ENST00000568799 SF3B2Q13435 895 aaKnown RBP29.63■■■□□ 2.33
GGA2-212ENST00000568799 CAMTA1Q9Y6Y1 1673 aa29.63■■■□□ 2.33
GGA2-212ENST00000568799 SOX12O15370 315 aa29.62■■■□□ 2.33
GGA2-212ENST00000568799 LARP1Q6PKG0 1096 aaKnown RBP29.62■■■□□ 2.33
GGA2-212ENST00000568799 BLMP54132 1417 aaPredicted RBP29.61■■■□□ 2.33
GGA2-212ENST00000568799 NINLQ9Y2I6 1382 aa29.61■■■□□ 2.33
GGA2-212ENST00000568799 TMF1P82094 1093 aa29.61■■■□□ 2.33
GGA2-212ENST00000568799 AATKQ6ZMQ8 1374 aa29.6■■■□□ 2.33
GGA2-212ENST00000568799 LMO7Q8WWI1 1683 aa29.6■■■□□ 2.33
GGA2-212ENST00000568799 MON2Q7Z3U7 1717 aa29.59■■■□□ 2.33
GGA2-212ENST00000568799 CD163L1Q9NR16 1453 aa29.58■■■□□ 2.33
GGA2-212ENST00000568799 TCP11L2Q8N4U5 519 aa29.58■■■□□ 2.33
GGA2-212ENST00000568799 COL5A2P05997 1499 aaPredicted RBP29.57■■■□□ 2.32
GGA2-212ENST00000568799 EDC4Q6P2E9 1401 aaKnown RBP29.56■■■□□ 2.32
GGA2-212ENST00000568799 BARGINQ6ZT62 677 aa29.56■■■□□ 2.32
GGA2-212ENST00000568799 A0A1W2PP64 1363 aa29.56■■■□□ 2.32
GGA2-212ENST00000568799 THRAP3Q9Y2W1 955 aaKnown RBP29.55■■■□□ 2.32
GGA2-212ENST00000568799 THSD7AQ9UPZ6 1657 aa29.54■■■□□ 2.32
GGA2-212ENST00000568799 CDCA8Q53HL2 280 aa29.54■■■□□ 2.32
GGA2-212ENST00000568799 ARHGEF25Q86VW2 580 aa29.54■■■□□ 2.32
GGA2-212ENST00000568799 NME9Q86XW9 330 aa29.54■■■□□ 2.32
GGA2-212ENST00000568799 USP31Q70CQ4 1352 aa29.54■■■□□ 2.32
GGA2-212ENST00000568799 CRB1P82279 1406 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms