RNA–Protein interactions for RNA: ENST00000568509.2

SPG7-219, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-219ENST00000568509 GLI3P10071 1580 aa21.64■■□□□ 1.05
SPG7-219ENST00000568509 ONECUT3O60422 494 aaPredicted RBP21.63■■□□□ 1.05
SPG7-219ENST00000568509 NBPF1Q3BBV0 1214 aa21.63■■□□□ 1.05
SPG7-219ENST00000568509 FOXD4L1Q9NU39 408 aa21.61■■□□□ 1.05
SPG7-219ENST00000568509 ZRANB1Q9UGI0 708 aa21.61■■□□□ 1.05
SPG7-219ENST00000568509 ARHGEF28Q8N1W1 1705 aaKnown RBP21.61■■□□□ 1.05
SPG7-219ENST00000568509 TRPM3Q9HCF6 1732 aaPredicted RBP21.61■■□□□ 1.05
SPG7-219ENST00000568509 A0A0G2JS52 829 aa21.61■■□□□ 1.05
SPG7-219ENST00000568509 MYT1Q01538 1121 aa21.61■■□□□ 1.05
SPG7-219ENST00000568509 CCDC61Q9Y6R9 512 aa21.61■■□□□ 1.05
SPG7-219ENST00000568509 NWD2Q9ULI1 1742 aa21.6■■□□□ 1.05
SPG7-219ENST00000568509 PLCH1Q4KWH8 1693 aa21.59■■□□□ 1.05
SPG7-219ENST00000568509 ABCA3Q99758 1704 aa21.59■■□□□ 1.05
SPG7-219ENST00000568509 SF3B2Q13435 895 aaKnown RBP21.59■■□□□ 1.05
SPG7-219ENST00000568509 KRT27Q7Z3Y8 459 aa21.59■■□□□ 1.05
SPG7-219ENST00000568509 NBPF8Q3BBV2 869 aa21.58■■□□□ 1.04
SPG7-219ENST00000568509 PRDM11Q9NQV5 511 aa21.58■■□□□ 1.04
SPG7-219ENST00000568509 ALS2Q96Q42 1657 aa21.58■■□□□ 1.04
SPG7-219ENST00000568509 BRWD3Q6RI45 1802 aa21.57■■□□□ 1.04
SPG7-219ENST00000568509 FAM98CQ17RN3 349 aaKnown RBP21.57■■□□□ 1.04
SPG7-219ENST00000568509 NUTM2GQ5VZR2 741 aa21.57■■□□□ 1.04
SPG7-219ENST00000568509 ACEP12821 1306 aa21.57■■□□□ 1.04
SPG7-219ENST00000568509 ATP7BP35670 1465 aa21.55■■□□□ 1.04
SPG7-219ENST00000568509 PLEKHG3A1L390 1219 aa21.55■■□□□ 1.04
SPG7-219ENST00000568509 SRPK2P78362 688 aaKnown RBP21.55■■□□□ 1.04
SPG7-219ENST00000568509 KIAA1210Q9ULL0 1709 aa21.55■■□□□ 1.04
SPG7-219ENST00000568509 BLMP54132 1417 aaPredicted RBP21.55■■□□□ 1.04
SPG7-219ENST00000568509 ITSN1Q15811 1721 aa21.54■■□□□ 1.04
SPG7-219ENST00000568509 L3MBTL2Q969R5 705 aa21.54■■□□□ 1.04
SPG7-219ENST00000568509 ZC3H6P61129 1189 aaKnown RBP21.53■■□□□ 1.04
SPG7-219ENST00000568509 COL14A1Q05707 1796 aaKnown RBP21.53■■□□□ 1.04
SPG7-219ENST00000568509 CHRNA2Q15822 529 aa21.52■■□□□ 1.04
SPG7-219ENST00000568509 DEFB132Q7Z7B7 95 aa21.52■■□□□ 1.04
SPG7-219ENST00000568509 ABTB2Q8N961 1025 aa21.52■■□□□ 1.04
SPG7-219ENST00000568509 SIN3AQ96ST3 1273 aa21.52■■□□□ 1.04
SPG7-219ENST00000568509 CENPJQ9HC77 1338 aaPredicted RBP21.52■■□□□ 1.04
SPG7-219ENST00000568509 POLR3AO14802 1390 aaPredicted RBP21.52■■□□□ 1.04
SPG7-219ENST00000568509 SPATA31A5Q5VU36 1347 aa21.51■■□□□ 1.03
SPG7-219ENST00000568509 SPATA31A7Q8IWB4 1347 aa21.51■■□□□ 1.03
SPG7-219ENST00000568509 HOXD11P31277 338 aaPredicted RBP21.51■■□□□ 1.03
SPG7-219ENST00000568509 NEUROD1Q13562 356 aa21.51■■□□□ 1.03
SPG7-219ENST00000568509 CABP2Q9NPB3 220 aa21.51■■□□□ 1.03
SPG7-219ENST00000568509 KIAA0232Q92628 1395 aa21.5■■□□□ 1.03
SPG7-219ENST00000568509 STRN4Q9NRL3 753 aa21.49■■□□□ 1.03
SPG7-219ENST00000568509 EVA1CP58658 441 aa21.48■■□□□ 1.03
SPG7-219ENST00000568509 NRAPQ86VF7 1730 aa21.48■■□□□ 1.03
SPG7-219ENST00000568509 NLRP13Q86W25 1043 aa21.47■■□□□ 1.03
SPG7-219ENST00000568509 EP400Q96L91 3159 aa21.46■■□□□ 1.03
SPG7-219ENST00000568509 CABP1Q9NZU7 370 aa21.46■■□□□ 1.03
SPG7-219ENST00000568509 CRYBG1Q9Y4K1 1723 aa21.45■■□□□ 1.02
SPG7-219ENST00000568509 FAM182BQ5T319 152 aa21.45■■□□□ 1.02
SPG7-219ENST00000568509 PPIP5K1Q6PFW1 1433 aa21.45■■□□□ 1.02
SPG7-219ENST00000568509 SPATA31A1Q5TZJ5 1347 aa21.44■■□□□ 1.02
SPG7-219ENST00000568509 BAG6P46379 1132 aa21.44■■□□□ 1.02
SPG7-219ENST00000568509 USP35Q9P2H5 1018 aa21.44■■□□□ 1.02
SPG7-219ENST00000568509 TOPAZ1Q8N9V7 1692 aa21.43■■□□□ 1.02
SPG7-219ENST00000568509 GCP02774 474 aa21.42■■□□□ 1.02
SPG7-219ENST00000568509 EVC2Q86UK5 1308 aa21.41■■□□□ 1.02
SPG7-219ENST00000568509 NLRP6P59044 892 aa21.39■■□□□ 1.02
SPG7-219ENST00000568509 PHRF1Q9P1Y6 1649 aaKnown RBP21.39■■□□□ 1.01
SPG7-219ENST00000568509 ROCK2O75116 1388 aaKnown RBP21.38■■□□□ 1.01
SPG7-219ENST00000568509 USP19O94966 1318 aa21.38■■□□□ 1.01
SPG7-219ENST00000568509 BRD4O60885 1362 aaPredicted RBP21.38■■□□□ 1.01
SPG7-219ENST00000568509 EN1Q05925 392 aaPredicted RBP21.37■■□□□ 1.01
SPG7-219ENST00000568509 LARP1Q6PKG0 1096 aaKnown RBP21.37■■□□□ 1.01
SPG7-219ENST00000568509 QRICH2Q9H0J4 1663 aa21.37■■□□□ 1.01
SPG7-219ENST00000568509 ZBTB7CA1YPR0 619 aa21.36■■□□□ 1.01
SPG7-219ENST00000568509 FAM196AQ6ZSG2 479 aa21.36■■□□□ 1.01
SPG7-219ENST00000568509 BARGINQ6ZT62 677 aa21.36■■□□□ 1.01
SPG7-219ENST00000568509 CPDO75976 1380 aa21.36■■□□□ 1.01
SPG7-219ENST00000568509 PDE3BQ13370 1112 aa21.36■■□□□ 1.01
SPG7-219ENST00000568509 TCP11L2Q8N4U5 519 aa21.35■■□□□ 1.01
SPG7-219ENST00000568509 ZNF692Q9BU19 519 aaPredicted RBP21.35■■□□□ 1.01
SPG7-219ENST00000568509 SSH2Q76I76 1423 aa21.34■■□□□ 1.01
SPG7-219ENST00000568509 CAMTA1Q9Y6Y1 1673 aa21.34■■□□□ 1.01
SPG7-219ENST00000568509 USP6P35125 1406 aa21.33■■□□□ 1.01
SPG7-219ENST00000568509 TRIM37O94972 964 aa21.33■■□□□ 1
SPG7-219ENST00000568509 TRPM1Q7Z4N2 1603 aa21.32■■□□□ 1
SPG7-219ENST00000568509 THSD7AQ9UPZ6 1657 aa21.32■■□□□ 1
SPG7-219ENST00000568509 THRAP3Q9Y2W1 955 aaKnown RBP21.32■■□□□ 1
SPG7-219ENST00000568509 NRKQ7Z2Y5 1582 aa21.31■■□□□ 1
SPG7-219ENST00000568509 PSDA5PKW4 1024 aaPredicted RBP21.31■■□□□ 1
SPG7-219ENST00000568509 APBA3O96018 575 aa21.28■■□□□ 1
SPG7-219ENST00000568509 RGPD1P0DJD0 1748 aa21.28■■□□□ 1
SPG7-219ENST00000568509 EZH2Q15910 746 aaKnown RBP21.28■■□□□ 1
SPG7-219ENST00000568509 TTC21BQ7Z4L5 1316 aa21.27■■□□□ 1
SPG7-219ENST00000568509 CARD11Q9BXL7 1154 aa21.27■■□□□ 1
SPG7-219ENST00000568509 LMO7Q8WWI1 1683 aa21.26■□□□□ 0.99
SPG7-219ENST00000568509 AATKQ6ZMQ8 1374 aa21.26■□□□□ 0.99
SPG7-219ENST00000568509 TOM1L2Q6ZVM7 507 aa21.25■□□□□ 0.99
SPG7-219ENST00000568509 KCNH5Q8NCM2 988 aa21.25■□□□□ 0.99
SPG7-219ENST00000568509 CAMKK2Q96RR4 588 aa21.25■□□□□ 0.99
SPG7-219ENST00000568509 SOX12O15370 315 aa21.24■□□□□ 0.99
SPG7-219ENST00000568509 COL5A2P05997 1499 aaPredicted RBP21.24■□□□□ 0.99
SPG7-219ENST00000568509 TTC21AQ8NDW8 1320 aa21.24■□□□□ 0.99
SPG7-219ENST00000568509 AXIN2Q9Y2T1 843 aa21.23■□□□□ 0.99
SPG7-219ENST00000568509 CRB1P82279 1406 aa21.23■□□□□ 0.99
SPG7-219ENST00000568509 R3HDM1Q15032 1099 aaKnown RBP21.23■□□□□ 0.99
SPG7-219ENST00000568509 DISP2A7MBM2 1401 aa21.22■□□□□ 0.99
SPG7-219ENST00000568509 KTN1Q86UP2 1357 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms