RNA–Protein interactions for RNA: ENST00000568423.5

SCAMP5-218, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 3

Gene SCAMP5, Length 1,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-218ENST00000568423 ITSN1Q15811 1721 aa25.35■■□□□ 1.65
SCAMP5-218ENST00000568423 SBNO2Q9Y2G9 1366 aa25.35■■□□□ 1.65
SCAMP5-218ENST00000568423 CCDC61Q9Y6R9 512 aa25.35■■□□□ 1.65
SCAMP5-218ENST00000568423 SLIT2O94813 1529 aa25.35■■□□□ 1.65
SCAMP5-218ENST00000568423 CCDC9Q9Y3X0 531 aaKnown RBP25.34■■□□□ 1.65
SCAMP5-218ENST00000568423 USP47Q96K76 1375 aa25.33■■□□□ 1.65
SCAMP5-218ENST00000568423 SRPK2P78362 688 aaKnown RBP25.32■■□□□ 1.64
SCAMP5-218ENST00000568423 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.32■■□□□ 1.64
SCAMP5-218ENST00000568423 FAM83GA6ND36 823 aa25.3■■□□□ 1.64
SCAMP5-218ENST00000568423 TRPM3Q9HCF6 1732 aaPredicted RBP25.29■■□□□ 1.64
SCAMP5-218ENST00000568423 VPS72Q15906 364 aa25.29■■□□□ 1.64
SCAMP5-218ENST00000568423 ACEP12821 1306 aa25.27■■□□□ 1.64
SCAMP5-218ENST00000568423 PLEKHG3A1L390 1219 aa25.26■■□□□ 1.63
SCAMP5-218ENST00000568423 ALS2Q96Q42 1657 aa25.26■■□□□ 1.63
SCAMP5-218ENST00000568423 BTG4Q9NY30 223 aa25.25■■□□□ 1.63
SCAMP5-218ENST00000568423 ABCA3Q99758 1704 aa25.25■■□□□ 1.63
SCAMP5-218ENST00000568423 NWD2Q9ULI1 1742 aa25.24■■□□□ 1.63
SCAMP5-218ENST00000568423 POLR3AO14802 1390 aaPredicted RBP25.23■■□□□ 1.63
SCAMP5-218ENST00000568423 CCDC125Q86Z20 511 aa25.23■■□□□ 1.63
SCAMP5-218ENST00000568423 CABP2Q9NPB3 220 aa25.23■■□□□ 1.63
SCAMP5-218ENST00000568423 PRDM11Q9NQV5 511 aa25.23■■□□□ 1.63
SCAMP5-218ENST00000568423 PLCH1Q4KWH8 1693 aa25.22■■□□□ 1.63
SCAMP5-218ENST00000568423 ST20-MTHFSA0A0A6YYL1 179 aa25.21■■□□□ 1.63
SCAMP5-218ENST00000568423 A0A0G2JS52 829 aa25.21■■□□□ 1.63
SCAMP5-218ENST00000568423 MYT1Q01538 1121 aa25.21■■□□□ 1.63
SCAMP5-218ENST00000568423 SEPT12Q8IYM1 358 aa25.21■■□□□ 1.63
SCAMP5-218ENST00000568423 TESK2Q96S53 571 aa25.21■■□□□ 1.63
SCAMP5-218ENST00000568423 EVC2Q86UK5 1308 aa25.2■■□□□ 1.62
SCAMP5-218ENST00000568423 GLI3P10071 1580 aa25.2■■□□□ 1.62
SCAMP5-218ENST00000568423 ABTB2Q8N961 1025 aa25.2■■□□□ 1.62
SCAMP5-218ENST00000568423 PPIP5K1Q6PFW1 1433 aa25.2■■□□□ 1.62
SCAMP5-218ENST00000568423 NUTM2GQ5VZR2 741 aa25.19■■□□□ 1.62
SCAMP5-218ENST00000568423 COL14A1Q05707 1796 aaKnown RBP25.18■■□□□ 1.62
SCAMP5-218ENST00000568423 ONECUT3O60422 494 aaPredicted RBP25.17■■□□□ 1.62
SCAMP5-218ENST00000568423 ZC3H6P61129 1189 aaKnown RBP25.15■■□□□ 1.62
SCAMP5-218ENST00000568423 NLRP13Q86W25 1043 aa25.15■■□□□ 1.62
SCAMP5-218ENST00000568423 CABP1Q9NZU7 370 aa25.15■■□□□ 1.62
SCAMP5-218ENST00000568423 BRD4O60885 1362 aaPredicted RBP25.14■■□□□ 1.61
SCAMP5-218ENST00000568423 KIAA0232Q92628 1395 aa25.14■■□□□ 1.61
SCAMP5-218ENST00000568423 SF3B2Q13435 895 aaKnown RBP25.13■■□□□ 1.61
SCAMP5-218ENST00000568423 FAM98CQ17RN3 349 aaKnown RBP25.13■■□□□ 1.61
SCAMP5-218ENST00000568423 KRT27Q7Z3Y8 459 aa25.13■■□□□ 1.61
SCAMP5-218ENST00000568423 AKAP12Q02952 1782 aa25.12■■□□□ 1.61
SCAMP5-218ENST00000568423 EVA1CP58658 441 aa25.11■■□□□ 1.61
SCAMP5-218ENST00000568423 CHRNA2Q15822 529 aa25.11■■□□□ 1.61
SCAMP5-218ENST00000568423 MYOM1P52179 1685 aa25.1■■□□□ 1.61
SCAMP5-218ENST00000568423 EP400Q96L91 3159 aa25.1■■□□□ 1.61
SCAMP5-218ENST00000568423 EIF4G2P78344 907 aaKnown RBP eCLIP25.1■■□□□ 1.61
SCAMP5-218ENST00000568423 STRN4Q9NRL3 753 aa25.1■■□□□ 1.61
SCAMP5-218ENST00000568423 SPATA31A5Q5VU36 1347 aa25.1■■□□□ 1.61
SCAMP5-218ENST00000568423 SPATA31A7Q8IWB4 1347 aa25.1■■□□□ 1.61
SCAMP5-218ENST00000568423 CRYBG1Q9Y4K1 1723 aa25.09■■□□□ 1.61
SCAMP5-218ENST00000568423 HSPA5P11021 654 aaKnown RBP25.09■■□□□ 1.61
SCAMP5-218ENST00000568423 ZNF692Q9BU19 519 aaPredicted RBP25.08■■□□□ 1.61
SCAMP5-218ENST00000568423 NRKQ7Z2Y5 1582 aa25.08■■□□□ 1.61
SCAMP5-218ENST00000568423 MON2Q7Z3U7 1717 aa25.08■■□□□ 1.61
SCAMP5-218ENST00000568423 NRAPQ86VF7 1730 aa25.08■■□□□ 1.61
SCAMP5-218ENST00000568423 BRWD3Q6RI45 1802 aa25.07■■□□□ 1.6
SCAMP5-218ENST00000568423 PHRF1Q9P1Y6 1649 aaKnown RBP25.07■■□□□ 1.6
SCAMP5-218ENST00000568423 BLMP54132 1417 aaPredicted RBP25.06■■□□□ 1.6
SCAMP5-218ENST00000568423 GCP02774 474 aa25.06■■□□□ 1.6
SCAMP5-218ENST00000568423 NLRP6P59044 892 aa25.06■■□□□ 1.6
SCAMP5-218ENST00000568423 ZRANB1Q9UGI0 708 aa25.06■■□□□ 1.6
SCAMP5-218ENST00000568423 USP6P35125 1406 aa25.04■■□□□ 1.6
SCAMP5-218ENST00000568423 SLC24A1O60721 1099 aa25.04■■□□□ 1.6
SCAMP5-218ENST00000568423 USP19O94966 1318 aa25.04■■□□□ 1.6
SCAMP5-218ENST00000568423 CD163L1Q9NR16 1453 aa25.03■■□□□ 1.6
SCAMP5-218ENST00000568423 TMF1P82094 1093 aa25.03■■□□□ 1.6
SCAMP5-218ENST00000568423 PUS7Q96PZ0 661 aaKnown RBP25.03■■□□□ 1.6
SCAMP5-218ENST00000568423 SPATA31A1Q5TZJ5 1347 aa25.02■■□□□ 1.6
SCAMP5-218ENST00000568423 CPDO75976 1380 aa25.02■■□□□ 1.6
SCAMP5-218ENST00000568423 USP35Q9P2H5 1018 aa25.01■■□□□ 1.59
SCAMP5-218ENST00000568423 ZBTB7CA1YPR0 619 aa25■■□□□ 1.59
SCAMP5-218ENST00000568423 NINLQ9Y2I6 1382 aa25■■□□□ 1.59
SCAMP5-218ENST00000568423 CPSF1Q10570 1443 aaKnown RBP25■■□□□ 1.59
SCAMP5-218ENST00000568423 PIK3C2AO00443 1686 aa24.97■■□□□ 1.59
SCAMP5-218ENST00000568423 SSH2Q76I76 1423 aa24.96■■□□□ 1.59
SCAMP5-218ENST00000568423 TTC21BQ7Z4L5 1316 aa24.96■■□□□ 1.59
SCAMP5-218ENST00000568423 TTC21AQ8NDW8 1320 aa24.95■■□□□ 1.58
SCAMP5-218ENST00000568423 BAG6P46379 1132 aa24.95■■□□□ 1.58
SCAMP5-218ENST00000568423 DEFB132Q7Z7B7 95 aa24.95■■□□□ 1.58
SCAMP5-218ENST00000568423 KCNH5Q8NCM2 988 aa24.95■■□□□ 1.58
SCAMP5-218ENST00000568423 KTN1Q86UP2 1357 aaKnown RBP24.94■■□□□ 1.58
SCAMP5-218ENST00000568423 LARP1Q6PKG0 1096 aaKnown RBP24.94■■□□□ 1.58
SCAMP5-218ENST00000568423 BARGINQ6ZT62 677 aa24.94■■□□□ 1.58
SCAMP5-218ENST00000568423 TCP11L2Q8N4U5 519 aa24.94■■□□□ 1.58
SCAMP5-218ENST00000568423 TMC1Q8TDI8 760 aa24.94■■□□□ 1.58
SCAMP5-218ENST00000568423 A0A1W2PP64 1363 aa24.93■■□□□ 1.58
SCAMP5-218ENST00000568423 PDE3BQ13370 1112 aa24.93■■□□□ 1.58
SCAMP5-218ENST00000568423 CDCA8Q53HL2 280 aa24.93■■□□□ 1.58
SCAMP5-218ENST00000568423 THRAP3Q9Y2W1 955 aaKnown RBP24.93■■□□□ 1.58
SCAMP5-218ENST00000568423 CAMTA1Q9Y6Y1 1673 aa24.93■■□□□ 1.58
SCAMP5-218ENST00000568423 FAM182BQ5T319 152 aa24.92■■□□□ 1.58
SCAMP5-218ENST00000568423 USP54Q70EL1 1684 aa24.91■■□□□ 1.58
SCAMP5-218ENST00000568423 HDGFL2Q7Z4V5 671 aaPredicted RBP24.91■■□□□ 1.58
SCAMP5-218ENST00000568423 SLC12A5Q9H2X9 1139 aa24.91■■□□□ 1.58
SCAMP5-218ENST00000568423 ZEB1P37275 1124 aaPredicted RBP24.9■■□□□ 1.58
SCAMP5-218ENST00000568423 FAM196AQ6ZSG2 479 aa24.9■■□□□ 1.58
SCAMP5-218ENST00000568423 AATKQ6ZMQ8 1374 aa24.9■■□□□ 1.58
SCAMP5-218ENST00000568423 THSD7AQ9UPZ6 1657 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms