RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 ADH1BP00325 375 aa9.19□□□□□ -0.94
CAPN3-218ENST00000568153 USP46P62068 366 aa9.19□□□□□ -0.94
CAPN3-218ENST00000568153 DIXDC1Q155Q3 683 aa9.19□□□□□ -0.94
CAPN3-218ENST00000568153 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.19□□□□□ -0.94
CAPN3-218ENST00000568153 LRRC9Q6ZRR7 1453 aa9.19□□□□□ -0.94
CAPN3-218ENST00000568153 DISP1Q96F81 1524 aa9.19□□□□□ -0.94
CAPN3-218ENST00000568153 CEP170Q5SW79 1584 aa9.19□□□□□ -0.94
CAPN3-218ENST00000568153 MOXD2PA6NHM9 499 aa9.18□□□□□ -0.94
CAPN3-218ENST00000568153 NDUFV2P19404 249 aa9.18□□□□□ -0.94
CAPN3-218ENST00000568153 ZEB1P37275 1124 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-218ENST00000568153 TMEM132AQ24JP5 1023 aa9.18□□□□□ -0.94
CAPN3-218ENST00000568153 MTUS2Q5JR59 1369 aa9.18□□□□□ -0.94
CAPN3-218ENST00000568153 PRG4Q92954 1404 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-218ENST00000568153 RSPH6AQ9H0K4 717 aa9.18□□□□□ -0.94
CAPN3-218ENST00000568153 ARID3CA6NKF2 412 aa9.17□□□□□ -0.94
CAPN3-218ENST00000568153 GUCA2AQ02747 115 aa9.17□□□□□ -0.94
CAPN3-218ENST00000568153 GRIPAP1Q4V328 841 aa9.17□□□□□ -0.94
CAPN3-218ENST00000568153 SH3D19Q5HYK7 790 aa9.17□□□□□ -0.94
CAPN3-218ENST00000568153 SALL2Q9Y467 1007 aaPredicted RBP9.17□□□□□ -0.94
CAPN3-218ENST00000568153 PTPRGP23470 1445 aa9.16□□□□□ -0.94
CAPN3-218ENST00000568153 SPSB2Q99619 263 aa9.16□□□□□ -0.94
CAPN3-218ENST00000568153 POLR3EQ9NVU0 708 aa9.16□□□□□ -0.94
CAPN3-218ENST00000568153 LIMD1Q9UGP4 676 aa9.16□□□□□ -0.94
CAPN3-218ENST00000568153 TIAM1Q13009 1591 aa9.16□□□□□ -0.94
CAPN3-218ENST00000568153 PLEKHD1A6NEE1 506 aa9.15□□□□□ -0.94
CAPN3-218ENST00000568153 S1PR4O95977 384 aa9.15□□□□□ -0.94
CAPN3-218ENST00000568153 GGCXP38435 758 aa9.15□□□□□ -0.94
CAPN3-218ENST00000568153 FAM50AQ14320 339 aaKnown RBP9.15□□□□□ -0.94
CAPN3-218ENST00000568153 SKIV2LQ15477 1246 aaKnown RBP9.15□□□□□ -0.94
CAPN3-218ENST00000568153 RSBN1LQ6PCB5 846 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-218ENST00000568153 BRICD5Q6PL45 260 aa9.15□□□□□ -0.94
CAPN3-218ENST00000568153 RNF19BQ6ZMZ0 732 aa9.15□□□□□ -0.94
CAPN3-218ENST00000568153 RIC3Q7Z5B4 369 aa9.15□□□□□ -0.94
CAPN3-218ENST00000568153 GOPCQ9HD26 462 aa9.15□□□□□ -0.94
CAPN3-218ENST00000568153 CCNB3Q8WWL7 1395 aa9.14□□□□□ -0.95
CAPN3-218ENST00000568153 RNF223E7ERA6 249 aa9.14□□□□□ -0.95
CAPN3-218ENST00000568153 SPTLC1O15269 473 aa9.14□□□□□ -0.95
CAPN3-218ENST00000568153 FMNL1O95466 1100 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-218ENST00000568153 CLK2P49760 499 aaKnown RBP9.14□□□□□ -0.95
CAPN3-218ENST00000568153 CCER1Q8TC90 406 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-218ENST00000568153 PCDHGC3Q9UN70 934 aa9.14□□□□□ -0.95
CAPN3-218ENST00000568153 PCF11O94913 1555 aaKnown RBP9.13□□□□□ -0.95
CAPN3-218ENST00000568153 FDX1P10109 184 aa9.13□□□□□ -0.95
CAPN3-218ENST00000568153 ITGAEP38570 1179 aa9.13□□□□□ -0.95
CAPN3-218ENST00000568153 FAM160A2Q8N612 972 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-218ENST00000568153 PROCA1Q8NCQ7 364 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-218ENST00000568153 SLC6A16Q9GZN6 736 aa9.13□□□□□ -0.95
CAPN3-218ENST00000568153 CCDC18Q5T9S5 1454 aa9.13□□□□□ -0.95
CAPN3-218ENST00000568153 RRBP1Q9P2E9 1410 aaKnown RBP9.13□□□□□ -0.95
CAPN3-218ENST00000568153 EPRSP07814 1512 aaKnown RBP9.12□□□□□ -0.95
CAPN3-218ENST00000568153 GJA5P36382 358 aa9.12□□□□□ -0.95
CAPN3-218ENST00000568153 PCDHB15Q9Y5E8 787 aa9.12□□□□□ -0.95
CAPN3-218ENST00000568153 KIAA0556O60303 1618 aa9.12□□□□□ -0.95
CAPN3-218ENST00000568153 PHLDB1Q86UU1 1377 aa9.12□□□□□ -0.95
CAPN3-218ENST00000568153 Q3C1V9 767 aa9.11□□□□□ -0.95
CAPN3-218ENST00000568153 PPEF1O14829 653 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-218ENST00000568153 CSPP1Q1MSJ5 1256 aa9.1□□□□□ -0.95
CAPN3-218ENST00000568153 MSS51Q4VC12 460 aa9.1□□□□□ -0.95
CAPN3-218ENST00000568153 ANKLE1Q8NAG6 615 aa9.1□□□□□ -0.95
CAPN3-218ENST00000568153 EMID1Q96A84 441 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-218ENST00000568153 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.1□□□□□ -0.95
CAPN3-218ENST00000568153 PRKD2Q9BZL6 878 aa9.1□□□□□ -0.95
CAPN3-218ENST00000568153 PRDM9Q9NQV7 894 aa9.1□□□□□ -0.95
CAPN3-218ENST00000568153 PLB1Q6P1J6 1458 aa9.09□□□□□ -0.95
CAPN3-218ENST00000568153 TUSC1Q2TAM9 212 aa9.09□□□□□ -0.95
CAPN3-218ENST00000568153 FBXO31Q5XUX0 539 aaPredicted RBP9.09□□□□□ -0.95
CAPN3-218ENST00000568153 PCMTD1Q96MG8 357 aaPredicted RBP9.09□□□□□ -0.95
CAPN3-218ENST00000568153 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.09□□□□□ -0.95
CAPN3-218ENST00000568153 QPCTQ16769 361 aa9.08□□□□□ -0.96
CAPN3-218ENST00000568153 SYMPKQ92797 1274 aaKnown RBP9.08□□□□□ -0.96
CAPN3-218ENST00000568153 V9GY48 417 aaPredicted RBP9.08□□□□□ -0.96
CAPN3-218ENST00000568153 HECW1Q76N89 1606 aa9.08□□□□□ -0.96
CAPN3-218ENST00000568153 NUP153P49790 1475 aaKnown RBP9.08□□□□□ -0.96
CAPN3-218ENST00000568153 UACAQ9BZF9 1416 aa9.07□□□□□ -0.96
CAPN3-218ENST00000568153 PLA2G2CQ5R387 149 aa9.07□□□□□ -0.96
CAPN3-218ENST00000568153 CABLES1Q8TDN4 633 aa9.07□□□□□ -0.96
CAPN3-218ENST00000568153 USB1Q9BQ65 265 aaKnown RBP9.07□□□□□ -0.96
CAPN3-218ENST00000568153 LILRB3O75022 631 aa9.06□□□□□ -0.96
CAPN3-218ENST00000568153 ATP10BO94823 1461 aa9.06□□□□□ -0.96
CAPN3-218ENST00000568153 NCOA2Q15596 1464 aa9.06□□□□□ -0.96
CAPN3-218ENST00000568153 CHD1O14646 1710 aa9.05□□□□□ -0.96
CAPN3-218ENST00000568153 C6orf229H3BNL8 230 aa9.05□□□□□ -0.96
CAPN3-218ENST00000568153 MMP16P51512 607 aa9.05□□□□□ -0.96
CAPN3-218ENST00000568153 MTMR2Q13614 643 aa9.05□□□□□ -0.96
CAPN3-218ENST00000568153 PRPF38BQ5VTL8 546 aaKnown RBP9.05□□□□□ -0.96
CAPN3-218ENST00000568153 ZBTB3Q9H5J0 574 aa9.05□□□□□ -0.96
CAPN3-218ENST00000568153 RAPGEF6Q8TEU7 1601 aa9.05□□□□□ -0.96
CAPN3-218ENST00000568153 CDK13Q14004 1512 aaKnown RBP9.05□□□□□ -0.96
CAPN3-218ENST00000568153 MYOM3Q5VTT5 1437 aa9.05□□□□□ -0.96
CAPN3-218ENST00000568153 FGD6Q6ZV73 1430 aa9.05□□□□□ -0.96
CAPN3-218ENST00000568153 CFDP1Q9UEE9 299 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-218ENST00000568153 CLASP1Q7Z460 1538 aa9.04□□□□□ -0.96
CAPN3-218ENST00000568153 EHBP1L1Q8N3D4 1523 aa9.04□□□□□ -0.96
CAPN3-218ENST00000568153 TROQ12816 1431 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-218ENST00000568153 CFAP43Q8NDM7 1665 aa9.04□□□□□ -0.96
CAPN3-218ENST00000568153 DXOO77932 396 aaKnown RBP9.03□□□□□ -0.96
CAPN3-218ENST00000568153 SLC19A1P41440 591 aa9.03□□□□□ -0.96
CAPN3-218ENST00000568153 RTL5Q5HYW3 569 aaPredicted RBP9.03□□□□□ -0.96
CAPN3-218ENST00000568153 PPP2R2DQ66LE6 453 aa9.03□□□□□ -0.96
CAPN3-218ENST00000568153 LIAT1Q6ZQX7 453 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms