RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 POM121Q96HA1 1249 aa8.28□□□□□ -1.08
HERPUD1-212ENST00000567944 UNC93B1Q9H1C4 597 aa8.28□□□□□ -1.08
HERPUD1-212ENST00000567944 CTHP32929 405 aa8.27□□□□□ -1.09
HERPUD1-212ENST00000567944 COG6Q9Y2V7 657 aa8.26□□□□□ -1.09
HERPUD1-212ENST00000567944 TBC1D2BQ9UPU7 963 aa8.25□□□□□ -1.09
HERPUD1-212ENST00000567944 RPIAP49247 311 aa8.24□□□□□ -1.09
HERPUD1-212ENST00000567944 IRF5Q13568 498 aa8.24□□□□□ -1.09
HERPUD1-212ENST00000567944 BAP1Q92560 729 aa8.24□□□□□ -1.09
HERPUD1-212ENST00000567944 GDPD2Q9HCC8 539 aa8.24□□□□□ -1.09
HERPUD1-212ENST00000567944 FKBPLQ9UIM3 349 aa8.24□□□□□ -1.09
HERPUD1-212ENST00000567944 SLC19A1P41440 591 aa8.23□□□□□ -1.09
HERPUD1-212ENST00000567944 SKOR1P84550 965 aa8.23□□□□□ -1.09
HERPUD1-212ENST00000567944 TRIM32Q13049 653 aa8.23□□□□□ -1.09
HERPUD1-212ENST00000567944 CLUAP1Q96AJ1 413 aa8.23□□□□□ -1.09
HERPUD1-212ENST00000567944 OCSTAMPQ9BR26 566 aa8.23□□□□□ -1.09
HERPUD1-212ENST00000567944 SH3BP2P78314 561 aa8.22□□□□□ -1.09
HERPUD1-212ENST00000567944 NDUFB9Q9Y6M9 179 aa8.22□□□□□ -1.09
HERPUD1-212ENST00000567944 SPRYD7Q5W111 196 aa8.21□□□□□ -1.1
HERPUD1-212ENST00000567944 ZNF511Q8NB15 262 aa8.21□□□□□ -1.1
HERPUD1-212ENST00000567944 POTECB2RU33 542 aa8.2□□□□□ -1.1
HERPUD1-212ENST00000567944 UBTFP17480 764 aaKnown RBP8.2□□□□□ -1.1
HERPUD1-212ENST00000567944 LINC01559Q495D7 138 aa8.2□□□□□ -1.1
HERPUD1-212ENST00000567944 C4orf48Q5BLP8 95 aa8.2□□□□□ -1.1
HERPUD1-212ENST00000567944 SH3BP5LQ7L8J4 393 aa8.2□□□□□ -1.1
HERPUD1-212ENST00000567944 FNBP4Q8N3X1 1017 aaPredicted RBP8.2□□□□□ -1.1
HERPUD1-212ENST00000567944 A6NJR5 290 aa8.19□□□□□ -1.1
HERPUD1-212ENST00000567944 ZBTB24O43167 697 aaPredicted RBP8.19□□□□□ -1.1
HERPUD1-212ENST00000567944 PDXDC2PQ6P474 469 aa8.19□□□□□ -1.1
HERPUD1-212ENST00000567944 SH3RF1Q7Z6J0 888 aa8.19□□□□□ -1.1
HERPUD1-212ENST00000567944 ARMC2Q8NEN0 867 aa8.19□□□□□ -1.1
HERPUD1-212ENST00000567944 FOXJ1Q92949 421 aa8.19□□□□□ -1.1
HERPUD1-212ENST00000567944 TIMELESSQ9UNS1 1208 aa8.19□□□□□ -1.1
HERPUD1-212ENST00000567944 ZC3H4Q9UPT8 1303 aaKnown RBP8.19□□□□□ -1.1
HERPUD1-212ENST00000567944 APBB1O00213 710 aa8.18□□□□□ -1.1
HERPUD1-212ENST00000567944 TRIM67Q6ZTA4 783 aa8.18□□□□□ -1.1
HERPUD1-212ENST00000567944 CD2BP2O95400 341 aaKnown RBP8.17□□□□□ -1.1
HERPUD1-212ENST00000567944 ABL2P42684 1182 aa8.17□□□□□ -1.1
HERPUD1-212ENST00000567944 GPKOWQ92917 476 aaPredicted RBP eCLIP8.17□□□□□ -1.17e-11■□□□□ 9.7
HERPUD1-212ENST00000567944 FBXO45P0C2W1 286 aa8.16□□□□□ -1.1
HERPUD1-212ENST00000567944 WNT7BP56706 349 aa8.16□□□□□ -1.1
HERPUD1-212ENST00000567944 MYT1Q01538 1121 aa8.16□□□□□ -1.1
HERPUD1-212ENST00000567944 NBPF14Q5TI25 921 aa8.16□□□□□ -1.1
HERPUD1-212ENST00000567944 ZNF598Q86UK7 904 aaKnown RBP8.16□□□□□ -1.1
HERPUD1-212ENST00000567944 ZMYND15Q9H091 742 aa8.16□□□□□ -1.1
HERPUD1-212ENST00000567944 PKD2L1Q9P0L9 805 aa8.16□□□□□ -1.1
HERPUD1-212ENST00000567944 PKDCCQ504Y2 493 aa8.15□□□□□ -1.1
HERPUD1-212ENST00000567944 RC3H1Q5TC82 1133 aaKnown RBP8.15□□□□□ -1.1
HERPUD1-212ENST00000567944 GPSM3Q9Y4H4 160 aa8.15□□□□□ -1.1
HERPUD1-212ENST00000567944 ZNF697Q5TEC3 545 aa8.14□□□□□ -1.11
HERPUD1-212ENST00000567944 C14orf37Q86TY3 774 aa8.14□□□□□ -1.11
HERPUD1-212ENST00000567944 C1QTNF2Q9BXJ5 285 aa8.14□□□□□ -1.11
HERPUD1-212ENST00000567944 ZBBXA8MT70 800 aa8.13□□□□□ -1.11
HERPUD1-212ENST00000567944 WNT7AO00755 349 aa8.13□□□□□ -1.11
HERPUD1-212ENST00000567944 SIAH2O43255 324 aa8.13□□□□□ -1.11
HERPUD1-212ENST00000567944 RAD21O60216 631 aa8.13□□□□□ -1.11
HERPUD1-212ENST00000567944 GDF9O60383 454 aa8.13□□□□□ -1.11
HERPUD1-212ENST00000567944 BPHLQ86WA6 291 aaPredicted RBP8.13□□□□□ -1.11
HERPUD1-212ENST00000567944 PROSER2Q86WR7 435 aaPredicted RBP8.13□□□□□ -1.11
HERPUD1-212ENST00000567944 PRM3Q9NNZ6 103 aa8.13□□□□□ -1.11
HERPUD1-212ENST00000567944 PTK2Q05397 1052 aa8.12□□□□□ -1.11
HERPUD1-212ENST00000567944 VAC14Q08AM6 782 aa8.12□□□□□ -1.11
HERPUD1-212ENST00000567944 NR1H3Q13133 447 aa8.12□□□□□ -1.11
HERPUD1-212ENST00000567944 PNMA1Q8ND90 353 aa8.12□□□□□ -1.11
HERPUD1-212ENST00000567944 ADAM32Q8TC27 787 aa8.12□□□□□ -1.11
HERPUD1-212ENST00000567944 POM121CA8CG34 1229 aa8.11□□□□□ -1.11
HERPUD1-212ENST00000567944 TRAK2O60296 914 aa8.11□□□□□ -1.11
HERPUD1-212ENST00000567944 ERFEQ4G0M1 354 aa8.11□□□□□ -1.11
HERPUD1-212ENST00000567944 MRGPRX2Q96LB1 330 aa8.11□□□□□ -1.11
HERPUD1-212ENST00000567944 ARHGAP9Q9BRR9 750 aa8.11□□□□□ -1.11
HERPUD1-212ENST00000567944 MAGEB6P1A0A0J9YX57 407 aa8.1□□□□□ -1.11
HERPUD1-212ENST00000567944 DGAT1O75907 488 aa8.1□□□□□ -1.11
HERPUD1-212ENST00000567944 ADAMTS19Q8TE59 1207 aa8.1□□□□□ -1.11
HERPUD1-212ENST00000567944 CARD14Q9BXL6 1004 aa8.1□□□□□ -1.11
HERPUD1-212ENST00000567944 VARSP26640 1264 aaKnown RBP8.09□□□□□ -1.11
HERPUD1-212ENST00000567944 AGERQ15109 404 aa8.09□□□□□ -1.11
HERPUD1-212ENST00000567944 TRMT44Q8IYL2 757 aaKnown RBP8.09□□□□□ -1.11
HERPUD1-212ENST00000567944 FOXC1Q12948 553 aa8.08□□□□□ -1.12
HERPUD1-212ENST00000567944 WASHC4Q2M389 1173 aa8.08□□□□□ -1.12
HERPUD1-212ENST00000567944 TREML4Q6UXN2 200 aa8.08□□□□□ -1.12
HERPUD1-212ENST00000567944 EHBP1Q8NDI1 1231 aa8.08□□□□□ -1.12
HERPUD1-212ENST00000567944 FAM187AA6NFU0 413 aa8.07□□□□□ -1.12
HERPUD1-212ENST00000567944 TNFRSF10AO00220 468 aa8.07□□□□□ -1.12
HERPUD1-212ENST00000567944 LCE2AQ5TA79 106 aaPredicted RBP8.07□□□□□ -1.12
HERPUD1-212ENST00000567944 ZBTB33Q86T24 672 aa8.07□□□□□ -1.12
HERPUD1-212ENST00000567944 MPNDQ8N594 471 aa8.07□□□□□ -1.12
HERPUD1-212ENST00000567944 CDK15Q96Q40 435 aa8.07□□□□□ -1.12
HERPUD1-212ENST00000567944 ZNF330Q9Y3S2 320 aaPredicted RBP8.07□□□□□ -1.12
HERPUD1-212ENST00000567944 GRM5P41594 1212 aa8.06□□□□□ -1.12
HERPUD1-212ENST00000567944 PRR20EP86478 221 aa8.06□□□□□ -1.12
HERPUD1-212ENST00000567944 PRR20CP86479 221 aa8.06□□□□□ -1.12
HERPUD1-212ENST00000567944 PRR20DP86480 221 aa8.06□□□□□ -1.12
HERPUD1-212ENST00000567944 PRR20BP86481 221 aa8.06□□□□□ -1.12
HERPUD1-212ENST00000567944 PRR20AP86496 221 aa8.06□□□□□ -1.12
HERPUD1-212ENST00000567944 FAM174AQ8TBP5 190 aa8.06□□□□□ -1.12
HERPUD1-212ENST00000567944 ALG2Q9H553 416 aa8.06□□□□□ -1.12
HERPUD1-212ENST00000567944 TOR4AQ9NXH8 423 aa8.06□□□□□ -1.12
HERPUD1-212ENST00000567944 TLL2Q9Y6L7 1015 aa8.06□□□□□ -1.12
HERPUD1-212ENST00000567944 ST8SIA5O15466 376 aa8.05□□□□□ -1.12
HERPUD1-212ENST00000567944 ERICH6Q7L0X2 663 aa8.04□□□□□ -1.12
HERPUD1-212ENST00000567944 ZNF777Q9ULD5 760 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms