RNA–Protein interactions for RNA: ENST00000567722.5

CHRFAM7A-205, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best)

Gene CHRFAM7A, Length 689 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-205ENST00000567722 PLCH1Q4KWH8 1693 aa29.45■■■□□ 2.31
CHRFAM7A-205ENST00000567722 CCDC9Q9Y3X0 531 aaKnown RBP29.44■■■□□ 2.3
CHRFAM7A-205ENST00000567722 NWD2Q9ULI1 1742 aa29.44■■■□□ 2.3
CHRFAM7A-205ENST00000567722 ACEP12821 1306 aa29.44■■■□□ 2.3
CHRFAM7A-205ENST00000567722 RALGAPBQ86X10 1494 aa29.42■■■□□ 2.3
CHRFAM7A-205ENST00000567722 POLR3AO14802 1390 aaPredicted RBP29.42■■■□□ 2.3
CHRFAM7A-205ENST00000567722 PLEKHG3A1L390 1219 aa29.41■■■□□ 2.3
CHRFAM7A-205ENST00000567722 TONSLQ96HA7 1378 aa29.4■■■□□ 2.3
CHRFAM7A-205ENST00000567722 PPIP5K1Q6PFW1 1433 aa29.4■■■□□ 2.3
CHRFAM7A-205ENST00000567722 FAM83GA6ND36 823 aa29.4■■■□□ 2.3
CHRFAM7A-205ENST00000567722 VPS72Q15906 364 aa29.4■■■□□ 2.3
CHRFAM7A-205ENST00000567722 NBPF8Q3BBV2 869 aa29.4■■■□□ 2.3
CHRFAM7A-205ENST00000567722 CABP2Q9NPB3 220 aa29.4■■■□□ 2.3
CHRFAM7A-205ENST00000567722 EVC2Q86UK5 1308 aa29.38■■■□□ 2.29
CHRFAM7A-205ENST00000567722 GLI3P10071 1580 aa29.37■■■□□ 2.29
CHRFAM7A-205ENST00000567722 COL14A1Q05707 1796 aaKnown RBP29.36■■■□□ 2.29
CHRFAM7A-205ENST00000567722 PRDM11Q9NQV5 511 aa29.36■■■□□ 2.29
CHRFAM7A-205ENST00000567722 BTG4Q9NY30 223 aa29.36■■■□□ 2.29
CHRFAM7A-205ENST00000567722 NUTM2GQ5VZR2 741 aa29.34■■■□□ 2.29
CHRFAM7A-205ENST00000567722 ABTB2Q8N961 1025 aa29.33■■■□□ 2.29
CHRFAM7A-205ENST00000567722 CRYBG1Q9Y4K1 1723 aa29.33■■■□□ 2.29
CHRFAM7A-205ENST00000567722 A0A0G2JS52 829 aa29.31■■■□□ 2.28
CHRFAM7A-205ENST00000567722 MYT1Q01538 1121 aa29.31■■■□□ 2.28
CHRFAM7A-205ENST00000567722 SEPT12Q8IYM1 358 aa29.29■■■□□ 2.28
CHRFAM7A-205ENST00000567722 CARD11Q9BXL7 1154 aa29.29■■■□□ 2.28
CHRFAM7A-205ENST00000567722 CABP1Q9NZU7 370 aa29.29■■■□□ 2.28
CHRFAM7A-205ENST00000567722 PHRF1Q9P1Y6 1649 aaKnown RBP29.29■■■□□ 2.28
CHRFAM7A-205ENST00000567722 NRAPQ86VF7 1730 aa29.28■■■□□ 2.28
CHRFAM7A-205ENST00000567722 BRD4O60885 1362 aaPredicted RBP29.28■■■□□ 2.28
CHRFAM7A-205ENST00000567722 KIAA0232Q92628 1395 aa29.27■■■□□ 2.28
CHRFAM7A-205ENST00000567722 ZC3H6P61129 1189 aaKnown RBP29.26■■■□□ 2.27
CHRFAM7A-205ENST00000567722 NLRP13Q86W25 1043 aa29.25■■■□□ 2.27
CHRFAM7A-205ENST00000567722 CHRNA2Q15822 529 aa29.23■■■□□ 2.27
CHRFAM7A-205ENST00000567722 CCDC125Q86Z20 511 aa29.23■■■□□ 2.27
CHRFAM7A-205ENST00000567722 USP6P35125 1406 aa29.22■■■□□ 2.27
CHRFAM7A-205ENST00000567722 FAM98CQ17RN3 349 aaKnown RBP29.22■■■□□ 2.27
CHRFAM7A-205ENST00000567722 ONECUT3O60422 494 aaPredicted RBP29.21■■■□□ 2.27
CHRFAM7A-205ENST00000567722 EP400Q96L91 3159 aa29.21■■■□□ 2.27
CHRFAM7A-205ENST00000567722 BRWD3Q6RI45 1802 aa29.2■■■□□ 2.27
CHRFAM7A-205ENST00000567722 NRKQ7Z2Y5 1582 aa29.2■■■□□ 2.26
CHRFAM7A-205ENST00000567722 USP19O94966 1318 aa29.2■■■□□ 2.26
CHRFAM7A-205ENST00000567722 KRT27Q7Z3Y8 459 aa29.19■■■□□ 2.26
CHRFAM7A-205ENST00000567722 STRN4Q9NRL3 753 aa29.19■■■□□ 2.26
CHRFAM7A-205ENST00000567722 SPATA31A5Q5VU36 1347 aa29.19■■■□□ 2.26
CHRFAM7A-205ENST00000567722 SPATA31A7Q8IWB4 1347 aa29.19■■■□□ 2.26
CHRFAM7A-205ENST00000567722 SBNO2Q9Y2G9 1366 aa29.18■■■□□ 2.26
CHRFAM7A-205ENST00000567722 EVA1CP58658 441 aa29.17■■■□□ 2.26
CHRFAM7A-205ENST00000567722 NLRP6P59044 892 aa29.17■■■□□ 2.26
CHRFAM7A-205ENST00000567722 ZNF692Q9BU19 519 aaPredicted RBP29.17■■■□□ 2.26
CHRFAM7A-205ENST00000567722 SF3B2Q13435 895 aaKnown RBP29.16■■■□□ 2.26
CHRFAM7A-205ENST00000567722 GCP02774 474 aa29.15■■■□□ 2.26
CHRFAM7A-205ENST00000567722 CPDO75976 1380 aa29.14■■■□□ 2.26
CHRFAM7A-205ENST00000567722 BLMP54132 1417 aaPredicted RBP29.14■■■□□ 2.26
CHRFAM7A-205ENST00000567722 ZBTB7CA1YPR0 619 aa29.12■■■□□ 2.25
CHRFAM7A-205ENST00000567722 SPATA31A1Q5TZJ5 1347 aa29.11■■■□□ 2.25
CHRFAM7A-205ENST00000567722 AKAP12Q02952 1782 aa29.09■■■□□ 2.25
CHRFAM7A-205ENST00000567722 KTN1Q86UP2 1357 aaKnown RBP29.09■■■□□ 2.25
CHRFAM7A-205ENST00000567722 SSH2Q76I76 1423 aa29.09■■■□□ 2.25
CHRFAM7A-205ENST00000567722 USP35Q9P2H5 1018 aa29.08■■■□□ 2.25
CHRFAM7A-205ENST00000567722 TTC21BQ7Z4L5 1316 aa29.08■■■□□ 2.25
CHRFAM7A-205ENST00000567722 TTC21AQ8NDW8 1320 aa29.08■■■□□ 2.25
CHRFAM7A-205ENST00000567722 PIK3C2AO00443 1686 aa29.07■■■□□ 2.24
CHRFAM7A-205ENST00000567722 TMC1Q8TDI8 760 aa29.07■■■□□ 2.24
CHRFAM7A-205ENST00000567722 SLIT3O75094 1523 aa29.06■■■□□ 2.24
CHRFAM7A-205ENST00000567722 CAMTA1Q9Y6Y1 1673 aa29.05■■■□□ 2.24
CHRFAM7A-205ENST00000567722 LMO7Q8WWI1 1683 aa29.05■■■□□ 2.24
CHRFAM7A-205ENST00000567722 CPSF1Q10570 1443 aaKnown RBP29.04■■■□□ 2.24
CHRFAM7A-205ENST00000567722 THSD7AQ9UPZ6 1657 aa29.04■■■□□ 2.24
CHRFAM7A-205ENST00000567722 LARP1Q6PKG0 1096 aaKnown RBP29.03■■■□□ 2.24
CHRFAM7A-205ENST00000567722 HDGFL2Q7Z4V5 671 aaPredicted RBP29.03■■■□□ 2.24
CHRFAM7A-205ENST00000567722 KCNH5Q8NCM2 988 aa29.03■■■□□ 2.24
CHRFAM7A-205ENST00000567722 ZRANB1Q9UGI0 708 aa29.03■■■□□ 2.24
CHRFAM7A-205ENST00000567722 SLC24A1O60721 1099 aa29.01■■■□□ 2.23
CHRFAM7A-205ENST00000567722 SOX12O15370 315 aa29■■■□□ 2.23
CHRFAM7A-205ENST00000567722 TCP11L2Q8N4U5 519 aa29■■■□□ 2.23
CHRFAM7A-205ENST00000567722 AATKQ6ZMQ8 1374 aa29■■■□□ 2.23
CHRFAM7A-205ENST00000567722 COL5A2P05997 1499 aaPredicted RBP28.99■■■□□ 2.23
CHRFAM7A-205ENST00000567722 BARGINQ6ZT62 677 aa28.99■■■□□ 2.23
CHRFAM7A-205ENST00000567722 PCGF6Q9BYE7 350 aa28.99■■■□□ 2.23
CHRFAM7A-205ENST00000567722 MON2Q7Z3U7 1717 aa28.99■■■□□ 2.23
CHRFAM7A-205ENST00000567722 ST20-MTHFSA0A0A6YYL1 179 aa28.98■■■□□ 2.23
CHRFAM7A-205ENST00000567722 DEFB132Q7Z7B7 95 aa28.98■■■□□ 2.23
CHRFAM7A-205ENST00000567722 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.98■■■□□ 2.23
CHRFAM7A-205ENST00000567722 TERF2IPQ9NYB0 399 aa28.98■■■□□ 2.23
CHRFAM7A-205ENST00000567722 BAG6P46379 1132 aa28.97■■■□□ 2.23
CHRFAM7A-205ENST00000567722 PUS7Q96PZ0 661 aaKnown RBP28.97■■■□□ 2.23
CHRFAM7A-205ENST00000567722 THRAP3Q9Y2W1 955 aaKnown RBP28.97■■■□□ 2.23
CHRFAM7A-205ENST00000567722 PDE3BQ13370 1112 aa28.96■■■□□ 2.23
CHRFAM7A-205ENST00000567722 FAM182BQ5T319 152 aa28.96■■■□□ 2.23
CHRFAM7A-205ENST00000567722 CRB1P82279 1406 aa28.95■■■□□ 2.23
CHRFAM7A-205ENST00000567722 SLC12A5Q9H2X9 1139 aa28.95■■■□□ 2.22
CHRFAM7A-205ENST00000567722 TOM1L2Q6ZVM7 507 aa28.93■■■□□ 2.22
CHRFAM7A-205ENST00000567722 CLSPNQ9HAW4 1339 aa28.93■■■□□ 2.22
CHRFAM7A-205ENST00000567722 RGPD1P0DJD0 1748 aa28.92■■■□□ 2.22
CHRFAM7A-205ENST00000567722 NINLQ9Y2I6 1382 aa28.92■■■□□ 2.22
CHRFAM7A-205ENST00000567722 FAM196AQ6ZSG2 479 aa28.92■■■□□ 2.22
CHRFAM7A-205ENST00000567722 CD163L1Q9NR16 1453 aa28.91■■■□□ 2.22
CHRFAM7A-205ENST00000567722 ARHGEF25Q86VW2 580 aa28.91■■■□□ 2.22
CHRFAM7A-205ENST00000567722 TESK2Q96S53 571 aa28.91■■■□□ 2.22
CHRFAM7A-205ENST00000567722 EDC4Q6P2E9 1401 aaKnown RBP28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms