RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 ACEP12821 1306 aa9.87□□□□□ -0.83
SF3B3-209ENST00000567635 ATP7BP35670 1465 aa9.87□□□□□ -0.83
SF3B3-209ENST00000567635 UPF1Q92900 1129 aaKnown RBP eCLIP9.87□□□□□ -0.83
SF3B3-209ENST00000567635 CABP2Q9NPB3 220 aa9.87□□□□□ -0.83
SF3B3-209ENST00000567635 ABCA3Q99758 1704 aa9.87□□□□□ -0.83
SF3B3-209ENST00000567635 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.87□□□□□ -0.83
SF3B3-209ENST00000567635 NWD2Q9ULI1 1742 aa9.86□□□□□ -0.83
SF3B3-209ENST00000567635 SLIT2O94813 1529 aa9.86□□□□□ -0.83
SF3B3-209ENST00000567635 POLR3AO14802 1390 aaPredicted RBP9.86□□□□□ -0.83
SF3B3-209ENST00000567635 TONSLQ96HA7 1378 aa9.86□□□□□ -0.83
SF3B3-209ENST00000567635 EVC2Q86UK5 1308 aa9.85□□□□□ -0.83
SF3B3-209ENST00000567635 RGS12O14924 1447 aa9.85□□□□□ -0.83
SF3B3-209ENST00000567635 TOPAZ1Q8N9V7 1692 aa9.85□□□□□ -0.83
SF3B3-209ENST00000567635 PLCH1Q4KWH8 1693 aa9.84□□□□□ -0.83
SF3B3-209ENST00000567635 VPS72Q15906 364 aa9.84□□□□□ -0.83
SF3B3-209ENST00000567635 NCBP3Q53F19 620 aaKnown RBP9.84□□□□□ -0.83
SF3B3-209ENST00000567635 NUTM2GQ5VZR2 741 aa9.84□□□□□ -0.83
SF3B3-209ENST00000567635 ABTB2Q8N961 1025 aa9.84□□□□□ -0.83
SF3B3-209ENST00000567635 CARD11Q9BXL7 1154 aa9.84□□□□□ -0.83
SF3B3-209ENST00000567635 CABP1Q9NZU7 370 aa9.84□□□□□ -0.83
SF3B3-209ENST00000567635 CCDC9Q9Y3X0 531 aaKnown RBP9.84□□□□□ -0.83
SF3B3-209ENST00000567635 PPIP5K1Q6PFW1 1433 aa9.83□□□□□ -0.84
SF3B3-209ENST00000567635 CNKSR2Q8WXI2 1034 aa9.83□□□□□ -0.84
SF3B3-209ENST00000567635 BTG4Q9NY30 223 aa9.83□□□□□ -0.84
SF3B3-209ENST00000567635 CRYBG1Q9Y4K1 1723 aa9.82□□□□□ -0.84
SF3B3-209ENST00000567635 BRWD3Q6RI45 1802 aa9.82□□□□□ -0.84
SF3B3-209ENST00000567635 NLRP13Q86W25 1043 aa9.82□□□□□ -0.84
SF3B3-209ENST00000567635 PRDM11Q9NQV5 511 aa9.82□□□□□ -0.84
SF3B3-209ENST00000567635 RALGAPBQ86X10 1494 aa9.82□□□□□ -0.84
SF3B3-209ENST00000567635 COL14A1Q05707 1796 aaKnown RBP9.82□□□□□ -0.84
SF3B3-209ENST00000567635 BRD4O60885 1362 aaPredicted RBP9.81□□□□□ -0.84
SF3B3-209ENST00000567635 ATAD2Q6PL18 1390 aa9.81□□□□□ -0.84
SF3B3-209ENST00000567635 ONECUT3O60422 494 aaPredicted RBP9.81□□□□□ -0.84
SF3B3-209ENST00000567635 ZC3H6P61129 1189 aaKnown RBP9.81□□□□□ -0.84
SF3B3-209ENST00000567635 ZNF692Q9BU19 519 aaPredicted RBP9.81□□□□□ -0.84
SF3B3-209ENST00000567635 GLI3P10071 1580 aa9.8□□□□□ -0.84
SF3B3-209ENST00000567635 POTEDQ86YR6 584 aa9.8□□□□□ -0.84
SF3B3-209ENST00000567635 SEPT12Q8IYM1 358 aa9.8□□□□□ -0.84
SF3B3-209ENST00000567635 KIAA0232Q92628 1395 aa9.79□□□□□ -0.84
SF3B3-209ENST00000567635 GCP02774 474 aa9.79□□□□□ -0.84
SF3B3-209ENST00000567635 NLRP6P59044 892 aa9.79□□□□□ -0.84
SF3B3-209ENST00000567635 CHRNA2Q15822 529 aa9.79□□□□□ -0.84
SF3B3-209ENST00000567635 CCDC125Q86Z20 511 aa9.79□□□□□ -0.84
SF3B3-209ENST00000567635 NRAPQ86VF7 1730 aa9.79□□□□□ -0.84
SF3B3-209ENST00000567635 PHRF1Q9P1Y6 1649 aaKnown RBP9.78□□□□□ -0.84
SF3B3-209ENST00000567635 AKAP12Q02952 1782 aa9.78□□□□□ -0.84
SF3B3-209ENST00000567635 EVA1CP58658 441 aa9.78□□□□□ -0.84
SF3B3-209ENST00000567635 PCGF6Q9BYE7 350 aa9.78□□□□□ -0.84
SF3B3-209ENST00000567635 USP6P35125 1406 aa9.78□□□□□ -0.84
SF3B3-209ENST00000567635 SPATA31A5Q5VU36 1347 aa9.78□□□□□ -0.84
SF3B3-209ENST00000567635 SPATA31A7Q8IWB4 1347 aa9.78□□□□□ -0.84
SF3B3-209ENST00000567635 SBNO2Q9Y2G9 1366 aa9.77□□□□□ -0.84
SF3B3-209ENST00000567635 SLC24A1O60721 1099 aa9.77□□□□□ -0.85
SF3B3-209ENST00000567635 FAM98CQ17RN3 349 aaKnown RBP9.77□□□□□ -0.85
SF3B3-209ENST00000567635 STRN4Q9NRL3 753 aa9.77□□□□□ -0.85
SF3B3-209ENST00000567635 USP19O94966 1318 aa9.77□□□□□ -0.85
SF3B3-209ENST00000567635 A0A0G2JS52 829 aa9.76□□□□□ -0.85
SF3B3-209ENST00000567635 MYT1Q01538 1121 aa9.76□□□□□ -0.85
SF3B3-209ENST00000567635 KRT27Q7Z3Y8 459 aa9.76□□□□□ -0.85
SF3B3-209ENST00000567635 PUS7Q96PZ0 661 aaKnown RBP9.76□□□□□ -0.85
SF3B3-209ENST00000567635 TIMELESSQ9UNS1 1208 aa9.76□□□□□ -0.85
SF3B3-209ENST00000567635 TTC21BQ7Z4L5 1316 aa9.76□□□□□ -0.85
SF3B3-209ENST00000567635 CPDO75976 1380 aa9.75□□□□□ -0.85
SF3B3-209ENST00000567635 KTN1Q86UP2 1357 aaKnown RBP9.75□□□□□ -0.85
SF3B3-209ENST00000567635 SSH2Q76I76 1423 aa9.75□□□□□ -0.85
SF3B3-209ENST00000567635 ST20-MTHFSA0A0A6YYL1 179 aa9.75□□□□□ -0.85
SF3B3-209ENST00000567635 TMC1Q8TDI8 760 aa9.75□□□□□ -0.85
SF3B3-209ENST00000567635 SLC12A5Q9H2X9 1139 aa9.75□□□□□ -0.85
SF3B3-209ENST00000567635 SPATA31A1Q5TZJ5 1347 aa9.75□□□□□ -0.85
SF3B3-209ENST00000567635 TTC21AQ8NDW8 1320 aa9.75□□□□□ -0.85
SF3B3-209ENST00000567635 CLSPNQ9HAW4 1339 aa9.75□□□□□ -0.85
SF3B3-209ENST00000567635 CPSF1Q10570 1443 aaKnown RBP9.74□□□□□ -0.85
SF3B3-209ENST00000567635 RGPD5Q99666 1765 aa9.74□□□□□ -0.85
SF3B3-209ENST00000567635 NRKQ7Z2Y5 1582 aa9.74□□□□□ -0.85
SF3B3-209ENST00000567635 CAMTA1Q9Y6Y1 1673 aa9.74□□□□□ -0.85
SF3B3-209ENST00000567635 ZBTB7CA1YPR0 619 aa9.73□□□□□ -0.85
SF3B3-209ENST00000567635 SF3B2Q13435 895 aaKnown RBP9.73□□□□□ -0.85
SF3B3-209ENST00000567635 LARP1Q6PKG0 1096 aaKnown RBP9.73□□□□□ -0.85
SF3B3-209ENST00000567635 HDGFL2Q7Z4V5 671 aaPredicted RBP9.73□□□□□ -0.85
SF3B3-209ENST00000567635 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.73□□□□□ -0.85
SF3B3-209ENST00000567635 KCNH5Q8NCM2 988 aa9.73□□□□□ -0.85
SF3B3-209ENST00000567635 TESK2Q96S53 571 aa9.73□□□□□ -0.85
SF3B3-209ENST00000567635 TERF2IPQ9NYB0 399 aa9.73□□□□□ -0.85
SF3B3-209ENST00000567635 PIK3C2AO00443 1686 aa9.73□□□□□ -0.85
SF3B3-209ENST00000567635 MON2Q7Z3U7 1717 aa9.73□□□□□ -0.85
SF3B3-209ENST00000567635 KAT6BQ8WYB5 2073 aa9.72□□□□□ -0.85
SF3B3-209ENST00000567635 LMO7Q8WWI1 1683 aa9.72□□□□□ -0.85
SF3B3-209ENST00000567635 BARGINQ6ZT62 677 aa9.72□□□□□ -0.85
SF3B3-209ENST00000567635 USP35Q9P2H5 1018 aa9.72□□□□□ -0.85
SF3B3-209ENST00000567635 AATKQ6ZMQ8 1374 aa9.72□□□□□ -0.85
SF3B3-209ENST00000567635 COL18A1P39060 1754 aa9.71□□□□□ -0.85
SF3B3-209ENST00000567635 ARHGEF25Q86VW2 580 aa9.71□□□□□ -0.86
SF3B3-209ENST00000567635 TCP11L2Q8N4U5 519 aa9.71□□□□□ -0.86
SF3B3-209ENST00000567635 THRAP3Q9Y2W1 955 aaKnown RBP9.71□□□□□ -0.86
SF3B3-209ENST00000567635 BLMP54132 1417 aaPredicted RBP9.71□□□□□ -0.86
SF3B3-209ENST00000567635 SLIT3O75094 1523 aa9.71□□□□□ -0.86
SF3B3-209ENST00000567635 EP400Q96L91 3159 aa9.71□□□□□ -0.86
SF3B3-209ENST00000567635 SOX12O15370 315 aa9.7□□□□□ -0.86
SF3B3-209ENST00000567635 TMF1P82094 1093 aa9.7□□□□□ -0.86
SF3B3-209ENST00000567635 FAM182BQ5T319 152 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms